RNA–Protein interactions for RNA: ENST00000479689.1

SNX8-207, Transcript of sorting nexin 8, humanhuman

TSL 2

Gene SNX8, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-207ENST00000479689 DDX49Q9Y6V7 483 aaKnown RBP11.31□□□□□ -0.6
SNX8-207ENST00000479689 ELP1O95163 1332 aa11.31□□□□□ -0.6
SNX8-207ENST00000479689 CCDC171Q6TFL3 1326 aa11.31□□□□□ -0.6
SNX8-207ENST00000479689 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.3□□□□□ -0.6
SNX8-207ENST00000479689 PTPDC1A2A3K4 754 aa11.3□□□□□ -0.6
SNX8-207ENST00000479689 SOWAHBA6NEL2 793 aa11.3□□□□□ -0.6
SNX8-207ENST00000479689 FGAP02671 866 aa11.3□□□□□ -0.6
SNX8-207ENST00000479689 ICAM1P05362 532 aa11.3□□□□□ -0.6
SNX8-207ENST00000479689 HSPD1P10809 573 aaKnown RBP11.3□□□□□ -0.6
SNX8-207ENST00000479689 EPHB4P54760 987 aa11.3□□□□□ -0.6
SNX8-207ENST00000479689 SMAD3P84022 425 aaKnown RBP11.3□□□□□ -0.6
SNX8-207ENST00000479689 ALX1Q15699 326 aa11.3□□□□□ -0.6
SNX8-207ENST00000479689 SYDE2Q5VT97 1194 aa11.3□□□□□ -0.6
SNX8-207ENST00000479689 CCSAPQ6IQ19 270 aaPredicted RBP11.3□□□□□ -0.6
SNX8-207ENST00000479689 TTBK2Q6IQ55 1244 aa11.3□□□□□ -0.6
SNX8-207ENST00000479689 MFSD6Q6ZSS7 791 aa11.3□□□□□ -0.6
SNX8-207ENST00000479689 ZNF589Q86UQ0 364 aaPredicted RBP11.3□□□□□ -0.6
SNX8-207ENST00000479689 FBXO16Q8IX29 292 aaPredicted RBP11.3□□□□□ -0.6
SNX8-207ENST00000479689 TMEM47Q9BQJ4 181 aa11.3□□□□□ -0.6
SNX8-207ENST00000479689 PPP1R12CQ9BZL4 782 aa11.3□□□□□ -0.6
SNX8-207ENST00000479689 RWDD1Q9H446 243 aaPredicted RBP11.3□□□□□ -0.6
SNX8-207ENST00000479689 CYP39A1Q9NYL5 469 aa11.3□□□□□ -0.6
SNX8-207ENST00000479689 COL6A3P12111 3177 aa11.3□□□□□ -0.6
SNX8-207ENST00000479689 ARVCFO00192 962 aa11.29□□□□□ -0.6
SNX8-207ENST00000479689 DYNC1LI2O43237 492 aaPredicted RBP11.29□□□□□ -0.6
SNX8-207ENST00000479689 ZEB2O60315 1214 aa11.29□□□□□ -0.6
SNX8-207ENST00000479689 TIMP1P01033 207 aa11.29□□□□□ -0.6
SNX8-207ENST00000479689 MFAP1P55081 439 aaKnown RBP11.29□□□□□ -0.6
SNX8-207ENST00000479689 PPIGQ13427 754 aaKnown RBP eCLIP11.29□□□□□ -0.65e-7■■■□□ 14.6
SNX8-207ENST00000479689 FSCN1Q16658 493 aaKnown RBP11.29□□□□□ -0.6
SNX8-207ENST00000479689 CXCL17Q6UXB2 119 aa11.29□□□□□ -0.6
SNX8-207ENST00000479689 CDX2Q99626 313 aaPredicted RBP11.29□□□□□ -0.6
SNX8-207ENST00000479689 KATNBL1Q9H079 304 aa11.29□□□□□ -0.6
SNX8-207ENST00000479689 SEMA6BQ9H3T3 888 aa11.29□□□□□ -0.6
SNX8-207ENST00000479689 ADD3Q9UEY8 706 aaKnown RBP11.29□□□□□ -0.6
SNX8-207ENST00000479689 TBX21Q9UL17 535 aa11.29□□□□□ -0.6
SNX8-207ENST00000479689 FOSL2P15408 326 aa11.28□□□□□ -0.6
SNX8-207ENST00000479689 SMPD1P17405 629 aa11.28□□□□□ -0.6
SNX8-207ENST00000479689 CALML3P27482 149 aa11.28□□□□□ -0.6
SNX8-207ENST00000479689 BAATQ14032 418 aaPredicted RBP11.28□□□□□ -0.6
SNX8-207ENST00000479689 AKNAD1Q5T1N1 836 aa11.28□□□□□ -0.6
SNX8-207ENST00000479689 MFSD5Q6N075 450 aa11.28□□□□□ -0.6
SNX8-207ENST00000479689 KIAA1211Q6ZU35 1233 aa11.28□□□□□ -0.6
SNX8-207ENST00000479689 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.28□□□□□ -0.6
SNX8-207ENST00000479689 TMEM199Q8N511 208 aa11.28□□□□□ -0.6
SNX8-207ENST00000479689 MYLIPQ8WY64 445 aa11.28□□□□□ -0.6
SNX8-207ENST00000479689 PURBQ96QR8 312 aaKnown RBP11.28□□□□□ -0.6
SNX8-207ENST00000479689 RANBP17Q9H2T7 1088 aaKnown RBP11.28□□□□□ -0.6
SNX8-207ENST00000479689 RNF41Q9H4P4 317 aaPredicted RBP11.28□□□□□ -0.6
SNX8-207ENST00000479689 VTA1Q9NP79 307 aa11.28□□□□□ -0.6
SNX8-207ENST00000479689 PDGFCQ9NRA1 345 aa11.28□□□□□ -0.6
SNX8-207ENST00000479689 DIAPH3Q9NSV4 1193 aa11.28□□□□□ -0.6
SNX8-207ENST00000479689 ZMYM6O95789 1325 aa11.28□□□□□ -0.6
SNX8-207ENST00000479689 NFIBO00712 420 aa11.27□□□□□ -0.61
SNX8-207ENST00000479689 CABYRO75952 493 aa11.27□□□□□ -0.61
SNX8-207ENST00000479689 FGRP09769 529 aa11.27□□□□□ -0.61
SNX8-207ENST00000479689 PDHBP11177 359 aa11.27□□□□□ -0.61
SNX8-207ENST00000479689 PCP11498 1178 aaKnown RBP11.27□□□□□ -0.61
SNX8-207ENST00000479689 CSF2RAP15509 400 aa11.27□□□□□ -0.61
SNX8-207ENST00000479689 SDSP20132 328 aa11.27□□□□□ -0.61
SNX8-207ENST00000479689 PTGS1P23219 599 aa11.27□□□□□ -0.61
SNX8-207ENST00000479689 CDK7P50613 346 aa11.27□□□□□ -0.61
SNX8-207ENST00000479689 AAMPQ13685 434 aa11.27□□□□□ -0.61
SNX8-207ENST00000479689 IQSEC1Q6DN90 963 aa11.27□□□□□ -0.61
SNX8-207ENST00000479689 CWC27Q6UX04 472 aaKnown RBP11.27□□□□□ -0.61
SNX8-207ENST00000479689 CHD1LQ86WJ1 897 aa11.27□□□□□ -0.61
SNX8-207ENST00000479689 TICAM2Q86XR7 235 aa11.27□□□□□ -0.61
SNX8-207ENST00000479689 TBC1D10CQ8IV04 446 aa11.27□□□□□ -0.61
SNX8-207ENST00000479689 FAM126BQ8IXS8 530 aa11.27□□□□□ -0.61
SNX8-207ENST00000479689 MAFAQ8NHW3 353 aaPredicted RBP11.27□□□□□ -0.61
SNX8-207ENST00000479689 ESR2Q92731 530 aa11.27□□□□□ -0.61
SNX8-207ENST00000479689 MPHOSPH6Q99547 160 aaKnown RBP11.27□□□□□ -0.61
SNX8-207ENST00000479689 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.27□□□□□ -0.61
SNX8-207ENST00000479689 ZKSCAN3Q9BRR0 538 aa11.27□□□□□ -0.61
SNX8-207ENST00000479689 TTYH1Q9H313 450 aaPredicted RBP11.27□□□□□ -0.61
SNX8-207ENST00000479689 TCP11L1Q9NUJ3 509 aa11.27□□□□□ -0.61
SNX8-207ENST00000479689 GNEQ9Y223 722 aaKnown RBP11.27□□□□□ -0.61
SNX8-207ENST00000479689 ASTN1O14525 1302 aa11.27□□□□□ -0.61
SNX8-207ENST00000479689 LRRC37A2A6NM11 1700 aa11.26□□□□□ -0.61
SNX8-207ENST00000479689 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.26□□□□□ -0.61
SNX8-207ENST00000479689 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.26□□□□□ -0.61
SNX8-207ENST00000479689 ZNF213O14771 459 aa11.26□□□□□ -0.61
SNX8-207ENST00000479689 CTAGE5O15320 804 aa11.26□□□□□ -0.61
SNX8-207ENST00000479689 ACRP10323 421 aa11.26□□□□□ -0.61
SNX8-207ENST00000479689 DNAJB2P25686 324 aa11.26□□□□□ -0.61
SNX8-207ENST00000479689 CYP2C18P33260 490 aa11.26□□□□□ -0.61
SNX8-207ENST00000479689 NOVP48745 357 aa11.26□□□□□ -0.61
SNX8-207ENST00000479689 ALDH5A1P51649 535 aaPredicted RBP11.26□□□□□ -0.61
SNX8-207ENST00000479689 PSMC6P62333 389 aa11.26□□□□□ -0.61
SNX8-207ENST00000479689 PDE4DQ08499 809 aa11.26□□□□□ -0.61
SNX8-207ENST00000479689 ZNF543Q08ER8 600 aa11.26□□□□□ -0.61
SNX8-207ENST00000479689 ITGA7Q13683 1181 aa11.26□□□□□ -0.61
SNX8-207ENST00000479689 USH1GQ495M9 461 aa11.26□□□□□ -0.61
SNX8-207ENST00000479689 PSRC1Q6PGN9 363 aaPredicted RBP11.26□□□□□ -0.61
SNX8-207ENST00000479689 BTNL9Q6UXG8 535 aa11.26□□□□□ -0.61
SNX8-207ENST00000479689 SLC30A10Q6XR72 485 aa11.26□□□□□ -0.61
SNX8-207ENST00000479689 RNF207Q6ZRF8 634 aa11.26□□□□□ -0.61
SNX8-207ENST00000479689 HIPK3Q9H422 1215 aa11.26□□□□□ -0.61
SNX8-207ENST00000479689 PNMA2Q9UL42 364 aa11.26□□□□□ -0.61
SNX8-207ENST00000479689 NEDD4P46934 1319 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms