RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 TAF6LQ9Y6J9 622 aa10.42□□□□□ -0.74
DDX56-211ENST00000479602 NCOR1O75376 2440 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 DLL1O00548 723 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 SH2B2O14492 632 aaPredicted RBP10.41□□□□□ -0.74
DDX56-211ENST00000479602 KIAA0355O15063 1070 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 PRDM1O75626 825 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 RPS6KB1P23443 525 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 COPB2P35606 906 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 TROAPQ12815 778 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 PLS1Q14651 629 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 SHHQ15465 462 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 C9orf50Q5SZB4 431 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 GPATCH4Q5T3I0 446 aaKnown RBP10.41□□□□□ -0.74
DDX56-211ENST00000479602 ANO1Q5XXA6 986 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 BTNL9Q6UXG8 535 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 RUFY3Q7L099 469 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 ZNF467Q7Z7K2 595 aaPredicted RBP10.41□□□□□ -0.74
DDX56-211ENST00000479602 PRPF38AQ8NAV1 312 aaKnown RBP10.41□□□□□ -0.74
DDX56-211ENST00000479602 DCAF4Q8WV16 495 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 TOX2Q96NM4 488 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 MMP19Q99542 508 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 TSEN34Q9BSV6 310 aaKnown RBP10.41□□□□□ -0.74
DDX56-211ENST00000479602 KATNBL1Q9H079 304 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 LY9Q9HBG7 655 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 SLC38A10Q9HBR0 1119 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 PNMA2Q9UL42 364 aa10.41□□□□□ -0.74
DDX56-211ENST00000479602 ERICH2A1L162 156 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 SEC24BO95487 1268 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 NDUFB10O96000 172 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 CALM1P0DP23 149 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 CALM2P0DP24 149 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 CALM3P0DP25 149 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 CDK7P50613 346 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 TLE2Q04725 743 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 KCTD2Q14681 263 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 ANKRD1Q15327 319 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 TRIM60Q495X7 471 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 ASPRV1Q53RT3 343 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 BLOC1S2Q6QNY1 142 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 CYB5R4Q7L1T6 521 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 ANKRD33Q7Z3H0 272 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 FAM177A1Q8N128 213 aaPredicted RBP10.4□□□□□ -0.74
DDX56-211ENST00000479602 BADQ92934 168 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 KIF2CQ99661 725 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 SLF1Q9BQI6 1058 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 TEX13BQ9BXU2 312 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 C22orf23Q9BZE7 217 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 CHD9Q3L8U1 2897 aa10.4□□□□□ -0.74
DDX56-211ENST00000479602 SYNGAP1Q96PV0 1343 aa10.39□□□□□ -0.75
DDX56-211ENST00000479602 ZNFX1Q9P2E3 1918 aaKnown RBP10.39□□□□□ -0.75
DDX56-211ENST00000479602 KBTBD13C9JR72 458 aa10.39□□□□□ -0.75
DDX56-211ENST00000479602 CTAGE5O15320 804 aa10.39□□□□□ -0.75
DDX56-211ENST00000479602 PRC1O43663 620 aa10.39□□□□□ -0.75
DDX56-211ENST00000479602 CST5P28325 142 aaPredicted RBP10.39□□□□□ -0.75
DDX56-211ENST00000479602 OAZ1P54368 228 aa10.39□□□□□ -0.75
DDX56-211ENST00000479602 EPHB4P54760 987 aa10.39□□□□□ -0.75
DDX56-211ENST00000479602 RABEP1Q15276 862 aa10.39□□□□□ -0.75
DDX56-211ENST00000479602 ADCK5Q3MIX3 580 aa10.39□□□□□ -0.75
DDX56-211ENST00000479602 IFIT1BQ5T764 474 aaKnown RBP10.39□□□□□ -0.75
DDX56-211ENST00000479602 FAM160B2Q86V87 743 aa10.39□□□□□ -0.75
DDX56-211ENST00000479602 PNMA1Q8ND90 353 aa10.39□□□□□ -0.75
DDX56-211ENST00000479602 NUP88Q99567 741 aaPredicted RBP10.39□□□□□ -0.75
DDX56-211ENST00000479602 LBHD1Q9BQE6 289 aaPredicted RBP10.39□□□□□ -0.75
DDX56-211ENST00000479602 TMEM47Q9BQJ4 181 aa10.39□□□□□ -0.75
DDX56-211ENST00000479602 SEMA6BQ9H3T3 888 aa10.39□□□□□ -0.75
DDX56-211ENST00000479602 XPNPEP3Q9NQH7 507 aa10.39□□□□□ -0.75
DDX56-211ENST00000479602 CLIP2Q9UDT6 1046 aa10.39□□□□□ -0.75
DDX56-211ENST00000479602 ATP11BQ9Y2G3 1177 aa10.39□□□□□ -0.75
DDX56-211ENST00000479602 CYP46A1Q9Y6A2 500 aa10.39□□□□□ -0.75
DDX56-211ENST00000479602 ZNF536O15090 1300 aa10.38□□□□□ -0.75
DDX56-211ENST00000479602 FRMPD3Q5JV73 1810 aa10.38□□□□□ -0.75
DDX56-211ENST00000479602 ADCY6O43306 1168 aa10.38□□□□□ -0.75
DDX56-211ENST00000479602 PGK1P00558 417 aa10.38□□□□□ -0.75
DDX56-211ENST00000479602 RARBP10826 455 aa10.38□□□□□ -0.75
DDX56-211ENST00000479602 PDHBP11177 359 aa10.38□□□□□ -0.75
DDX56-211ENST00000479602 AKR1A1P14550 325 aa10.38□□□□□ -0.75
DDX56-211ENST00000479602 SMAD3P84022 425 aaKnown RBP10.38□□□□□ -0.75
DDX56-211ENST00000479602 ZNF543Q08ER8 600 aa10.38□□□□□ -0.75
DDX56-211ENST00000479602 FAAP100Q0VG06 881 aa10.38□□□□□ -0.75
DDX56-211ENST00000479602 WTAPQ15007 396 aa10.38□□□□□ -0.75
DDX56-211ENST00000479602 C16orf59Q7L2K0 433 aa10.38□□□□□ -0.75
DDX56-211ENST00000479602 RNF180Q86T96 592 aa10.38□□□□□ -0.75
DDX56-211ENST00000479602 FERMT2Q96AC1 680 aa10.38□□□□□ -0.75
DDX56-211ENST00000479602 CHMP4CQ96CF2 233 aa10.38□□□□□ -0.75
DDX56-211ENST00000479602 JAKMIP1Q96N16 626 aaKnown RBP10.38□□□□□ -0.75
DDX56-211ENST00000479602 LZTS2Q9BRK4 669 aa10.38□□□□□ -0.75
DDX56-211ENST00000479602 UPF3AQ9H1J1 476 aaKnown RBP10.38□□□□□ -0.75
DDX56-211ENST00000479602 TTYH1Q9H313 450 aaPredicted RBP10.38□□□□□ -0.75
DDX56-211ENST00000479602 STX8Q9UNK0 236 aa10.38□□□□□ -0.75
DDX56-211ENST00000479602 A0A1W2PQ45 241 aaPredicted RBP10.37□□□□□ -0.75
DDX56-211ENST00000479602 A0A1W2PQY0 241 aa10.37□□□□□ -0.75
DDX56-211ENST00000479602 PALM3A6NDB9 673 aaPredicted RBP10.37□□□□□ -0.75
DDX56-211ENST00000479602 IFIT3O14879 490 aaKnown RBP10.37□□□□□ -0.75
DDX56-211ENST00000479602 DUSP11O75319 330 aaKnown RBP10.37□□□□□ -0.75
DDX56-211ENST00000479602 CASTP20810 708 aaKnown RBP10.37□□□□□ -0.75
DDX56-211ENST00000479602 MCM2P49736 904 aa10.37□□□□□ -0.75
DDX56-211ENST00000479602 GNAQP50148 359 aa10.37□□□□□ -0.75
DDX56-211ENST00000479602 ACLYP53396 1101 aa10.37□□□□□ -0.75
DDX56-211ENST00000479602 GJA9P57773 515 aa10.37□□□□□ -0.75
DDX56-211ENST00000479602 TMEM67Q5HYA8 995 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms