RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 PLIN4Q96Q06 1357 aa9.12□□□□□ -0.95
HMGCL-205ENST00000479458 PTPRZ1P23471 2315 aaPredicted RBP9.11□□□□□ -0.95
HMGCL-205ENST00000479458 MROH7Q68CQ1 1323 aa9.11□□□□□ -0.95
HMGCL-205ENST00000479458 IGKV6D-41A0A0C4DH26 115 aa9.11□□□□□ -0.95
HMGCL-205ENST00000479458 GRXCR1A8MXD5 290 aa9.11□□□□□ -0.95
HMGCL-205ENST00000479458 DCDC2CA8MYV0 355 aa9.11□□□□□ -0.95
HMGCL-205ENST00000479458 PEX10O60683 326 aa9.11□□□□□ -0.95
HMGCL-205ENST00000479458 CNMDO75829 334 aa9.11□□□□□ -0.95
HMGCL-205ENST00000479458 EEF2P13639 858 aaKnown RBP9.11□□□□□ -0.95
HMGCL-205ENST00000479458 ALADP13716 330 aa9.11□□□□□ -0.95
HMGCL-205ENST00000479458 CHMLP26374 656 aa9.11□□□□□ -0.95
HMGCL-205ENST00000479458 CTDSPL2Q05D32 466 aa9.11□□□□□ -0.95
HMGCL-205ENST00000479458 PDE4BQ07343 736 aa9.11□□□□□ -0.95
HMGCL-205ENST00000479458 KIAA1755Q5JYT7 1200 aa9.11□□□□□ -0.95
HMGCL-205ENST00000479458 ZNF444Q8N0Y2 327 aaPredicted RBP9.11□□□□□ -0.95
HMGCL-205ENST00000479458 SH2D4AQ9H788 454 aa9.11□□□□□ -0.95
HMGCL-205ENST00000479458 VCPKMTQ9H867 229 aa9.11□□□□□ -0.95
HMGCL-205ENST00000479458 MTCH2Q9Y6C9 303 aa9.11□□□□□ -0.95
HMGCL-205ENST00000479458 IVNS1ABPQ9Y6Y0 642 aa9.11□□□□□ -0.95
HMGCL-205ENST00000479458 ZNFX1Q9P2E3 1918 aaKnown RBP9.11□□□□□ -0.95
HMGCL-205ENST00000479458 SPTBN4Q9H254 2564 aa9.11□□□□□ -0.95
HMGCL-205ENST00000479458 LAMA4Q16363 1823 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 RAD50Q92878 1312 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 MYH4Q9Y623 1939 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 USP17L15C9J2P7 530 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 USP17L13C9JLJ4 530 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 USP17L11C9JVI0 530 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 USP17L18D6R9N7 530 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 USP17L22D6RA61 530 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 USP17L17D6RBQ6 530 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 USP17L19D6RCP7 530 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 USP17L20D6RJB6 530 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 ORC4O43929 436 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 FGRP09769 529 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 C7P10643 843 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 HAND2P61296 217 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 USP17L24Q0WX57 530 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 CATSPERGQ6ZRH7 1159 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 RNF180Q86T96 592 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 TMEM199Q8N511 208 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 NEDD1Q8NHV4 660 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 HLA-CQ95604 372 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 FERMT2Q96AC1 680 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 CEP95Q96GE4 821 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 DSCC1Q9BVC3 393 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 RPAP3Q9H6T3 665 aaPredicted RBP9.1□□□□□ -0.95
HMGCL-205ENST00000479458 CWC22Q9HCG8 908 aaKnown RBP9.1□□□□□ -0.95
HMGCL-205ENST00000479458 NYAP2Q9P242 653 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 PCDHA11Q9Y5I1 949 aa9.1□□□□□ -0.95
HMGCL-205ENST00000479458 CACNA1HO95180 2353 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 CACNA1BQ00975 2339 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 C5orf42Q9H799 3197 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 A0A1W2PQ45 241 aaPredicted RBP9.09□□□□□ -0.95
HMGCL-205ENST00000479458 A0A1W2PQY0 241 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 WDR46O15213 610 aaKnown RBP9.09□□□□□ -0.95
HMGCL-205ENST00000479458 PQBP1O60828 265 aaKnown RBP9.09□□□□□ -0.95
HMGCL-205ENST00000479458 TSPY3P0CV98 308 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 TSPY8P0CW00 308 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 TFAP4Q01664 338 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 BMP2KLQ5H9B9 411 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 FAM47AQ5JRC9 791 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 ZNF365Q70YC5 407 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 TBC1D10CQ8IV04 446 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 ABRAQ8N0Z2 381 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 PDCD7Q8N8D1 485 aaKnown RBP9.09□□□□□ -0.95
HMGCL-205ENST00000479458 NUP133Q8WUM0 1156 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 RUFY2Q8WXA3 655 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 PAGR1Q9BTK6 254 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 NKX2-4Q9H2Z4 354 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 OCEL1Q9H607 264 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 CD320Q9NPF0 282 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 INCENPQ9NQS7 918 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 SLC5A4Q9NY91 659 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 MTMR4Q9NYA4 1195 aa9.09□□□□□ -0.95
HMGCL-205ENST00000479458 YBX2Q9Y2T7 364 aaKnown RBP9.09□□□□□ -0.95
HMGCL-205ENST00000479458 PARP14Q460N5 1801 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 POTEB3A0JP26 581 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 MOXD2PA6NHM9 499 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 TSPY2A6NKD2 308 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 SPDYE16A6NNV3 312 aaPredicted RBP9.08□□□□□ -0.96
HMGCL-205ENST00000479458 SGSM2O43147 1006 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 TTLL1O95922 423 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 RARBP10826 455 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 PCP11498 1178 aaKnown RBP9.08□□□□□ -0.96
HMGCL-205ENST00000479458 CDK7P50613 346 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 SKIV2LQ15477 1246 aaKnown RBP9.08□□□□□ -0.96
HMGCL-205ENST00000479458 ERICH6BQ5W0A0 696 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 POTEBQ6S5H4 581 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 DPP9Q86TI2 863 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 FAM178BQ8IXR5 827 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 SPICE1Q8N0Z3 855 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 SHCBP1Q8NEM2 672 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 STAG1Q8WVM7 1258 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 GOPCQ9HD26 462 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 IL23AQ9NPF7 189 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 XPNPEP3Q9NQH7 507 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 METRNQ9UJH8 293 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 A0A0G2JMZ2 1700 aa9.08□□□□□ -0.96
HMGCL-205ENST00000479458 ELP1O95163 1332 aa9.07□□□□□ -0.96
HMGCL-205ENST00000479458 DCHS1Q96JQ0 3298 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms