RNA–Protein interactions for RNA: ENST00000479295.1

PTPN18-210, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-210ENST00000479295 IL17RAQ96F46 866 aa11.35□□□□□ -0.59
PTPN18-210ENST00000479295 USP26Q9BXU7 913 aa11.35□□□□□ -0.59
PTPN18-210ENST00000479295 AGXT2Q9BYV1 514 aa11.35□□□□□ -0.59
PTPN18-210ENST00000479295 KATNBL1Q9H079 304 aa11.35□□□□□ -0.59
PTPN18-210ENST00000479295 GPHNQ9NQX3 736 aaPredicted RBP11.35□□□□□ -0.59
PTPN18-210ENST00000479295 CYP39A1Q9NYL5 469 aa11.35□□□□□ -0.59
PTPN18-210ENST00000479295 CCPG1Q9ULG6 757 aa11.35□□□□□ -0.59
PTPN18-210ENST00000479295 TNRC18O15417 2968 aaPredicted RBP11.35□□□□□ -0.59
PTPN18-210ENST00000479295 LCTP09848 1927 aa11.35□□□□□ -0.59
PTPN18-210ENST00000479295 SOWAHBA6NEL2 793 aa11.34□□□□□ -0.59
PTPN18-210ENST00000479295 KLRF2D3W0D1 207 aa11.34□□□□□ -0.59
PTPN18-210ENST00000479295 SEPT4O43236 478 aa11.34□□□□□ -0.59
PTPN18-210ENST00000479295 SNAI1O95863 264 aaPredicted RBP11.34□□□□□ -0.59
PTPN18-210ENST00000479295 HMGB1P09429 215 aaKnown RBP11.34□□□□□ -0.59
PTPN18-210ENST00000479295 COL6A1P12109 1028 aa11.34□□□□□ -0.59
PTPN18-210ENST00000479295 ALAS1P13196 640 aa11.34□□□□□ -0.59
PTPN18-210ENST00000479295 CDC37Q16543 378 aaPredicted RBP11.34□□□□□ -0.59
PTPN18-210ENST00000479295 QRICH1Q2TAL8 776 aa11.34□□□□□ -0.59
PTPN18-210ENST00000479295 CATIPQ7Z7H3 387 aa11.34□□□□□ -0.59
PTPN18-210ENST00000479295 ZNF654Q8IZM8 581 aa11.34□□□□□ -0.59
PTPN18-210ENST00000479295 DDX11Q96FC9 970 aa11.34□□□□□ -0.59
PTPN18-210ENST00000479295 DDX20Q9UHI6 824 aaKnown RBP11.34□□□□□ -0.59
PTPN18-210ENST00000479295 SNX14Q9Y5W7 946 aa11.34□□□□□ -0.59
PTPN18-210ENST00000479295 ABCB11O95342 1321 aa11.34□□□□□ -0.59
PTPN18-210ENST00000479295 FRMPD3Q5JV73 1810 aa11.33□□□□□ -0.6
PTPN18-210ENST00000479295 NFIBO00712 420 aa11.33□□□□□ -0.6
PTPN18-210ENST00000479295 PPP1R11O60927 126 aaPredicted RBP11.33□□□□□ -0.6
PTPN18-210ENST00000479295 CALM1P0DP23 149 aa11.33□□□□□ -0.6
PTPN18-210ENST00000479295 CALM2P0DP24 149 aa11.33□□□□□ -0.6
PTPN18-210ENST00000479295 CALM3P0DP25 149 aa11.33□□□□□ -0.6
PTPN18-210ENST00000479295 TAL1P17542 331 aaPredicted RBP11.33□□□□□ -0.6
PTPN18-210ENST00000479295 RCAN1P53805 252 aa11.33□□□□□ -0.6
PTPN18-210ENST00000479295 NKX3-2P78367 333 aa11.33□□□□□ -0.6
PTPN18-210ENST00000479295 SPZ1Q9BXG8 430 aa11.33□□□□□ -0.6
PTPN18-210ENST00000479295 ISY1Q9ULR0 285 aaKnown RBP11.33□□□□□ -0.6
PTPN18-210ENST00000479295 POTEB2H3BUK9 544 aa11.32□□□□□ -0.6
PTPN18-210ENST00000479295 OPLAHO14841 1288 aa11.32□□□□□ -0.6
PTPN18-210ENST00000479295 ZBTB5O15062 677 aa11.32□□□□□ -0.6
PTPN18-210ENST00000479295 EDNRBP24530 442 aa11.32□□□□□ -0.6
PTPN18-210ENST00000479295 EVCP57679 992 aa11.32□□□□□ -0.6
PTPN18-210ENST00000479295 CNTN2Q02246 1040 aa11.32□□□□□ -0.6
PTPN18-210ENST00000479295 BAATQ14032 418 aaPredicted RBP11.32□□□□□ -0.6
PTPN18-210ENST00000479295 PRAMEF19Q5SWL8 479 aa11.32□□□□□ -0.6
PTPN18-210ENST00000479295 SAMD3Q8N6K7 520 aa11.32□□□□□ -0.6
PTPN18-210ENST00000479295 LZTS2Q9BRK4 669 aa11.32□□□□□ -0.6
PTPN18-210ENST00000479295 AMNQ9BXJ7 453 aa11.32□□□□□ -0.6
PTPN18-210ENST00000479295 TM6SF1Q9BZW5 370 aa11.32□□□□□ -0.6
PTPN18-210ENST00000479295 ABHD16BQ9H3Z7 469 aa11.32□□□□□ -0.6
PTPN18-210ENST00000479295 HOMER2Q9NSB8 354 aa11.32□□□□□ -0.6
PTPN18-210ENST00000479295 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.32□□□□□ -0.6
PTPN18-210ENST00000479295 MAP3K20Q9NYL2 800 aaKnown RBP11.32□□□□□ -0.6
PTPN18-210ENST00000479295 MKI67P46013 3256 aaKnown RBP11.31□□□□□ -0.6
PTPN18-210ENST00000479295 NID2Q14112 1375 aa11.31□□□□□ -0.6
PTPN18-210ENST00000479295 ASB14A6NK59 587 aa11.31□□□□□ -0.6
PTPN18-210ENST00000479295 FARP2O94887 1054 aaPredicted RBP11.31□□□□□ -0.6
PTPN18-210ENST00000479295 TFRCP02786 760 aaKnown RBP11.31□□□□□ -0.6
PTPN18-210ENST00000479295 KIF5BP33176 963 aa11.31□□□□□ -0.6
PTPN18-210ENST00000479295 GNAQP50148 359 aa11.31□□□□□ -0.6
PTPN18-210ENST00000479295 RPS6P62753 249 aaKnown RBP11.31□□□□□ -0.6
PTPN18-210ENST00000479295 APOA5Q6Q788 366 aa11.31□□□□□ -0.6
PTPN18-210ENST00000479295 RNF207Q6ZRF8 634 aa11.31□□□□□ -0.6
PTPN18-210ENST00000479295 ARMCX2Q7L311 632 aa11.31□□□□□ -0.6
PTPN18-210ENST00000479295 FBXO11Q86XK2 927 aa11.31□□□□□ -0.6
PTPN18-210ENST00000479295 CCDC144CPQ8IYA2 1237 aa11.31□□□□□ -0.6
PTPN18-210ENST00000479295 FANCBQ8NB91 859 aa11.31□□□□□ -0.6
PTPN18-210ENST00000479295 ZSWIM6Q9HCJ5 1215 aa11.31□□□□□ -0.6
PTPN18-210ENST00000479295 LRRC37A2A6NM11 1700 aa11.31□□□□□ -0.6
PTPN18-210ENST00000479295 PNMA6FA0A0J9YX94 578 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 RBM47A0AV96 593 aaKnown RBP11.3□□□□□ -0.6
PTPN18-210ENST00000479295 CCDC69A6NI79 296 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 ADAMTS4O75173 837 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 AKR1A1P14550 325 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 SLC4A3P48751 1232 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 ALDH5A1P51649 535 aaPredicted RBP11.3□□□□□ -0.6
PTPN18-210ENST00000479295 HSD17B4P51659 736 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 FUT2Q10981 343 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 TRAF1Q13077 416 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 ACVR2BQ13705 512 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 PPP2R5BQ15173 497 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 SLC30A10Q6XR72 485 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 TMTC3Q6ZXV5 915 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 NECAB2Q7Z6G3 386 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 MCF2L2Q86YR7 1114 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 SRBD1Q8N5C6 995 aaKnown RBP11.3□□□□□ -0.6
PTPN18-210ENST00000479295 DNERQ8NFT8 737 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 CTCFLQ8NI51 663 aaPredicted RBP11.3□□□□□ -0.6
PTPN18-210ENST00000479295 DIS3LQ8TF46 1054 aaKnown RBP11.3□□□□□ -0.6
PTPN18-210ENST00000479295 PURBQ96QR8 312 aaKnown RBP11.3□□□□□ -0.6
PTPN18-210ENST00000479295 PIGSQ96S52 555 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 MYL10Q9BUA6 226 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 LRRC2Q9BYS8 371 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 FAM217BQ9NTX9 383 aaPredicted RBP11.3□□□□□ -0.6
PTPN18-210ENST00000479295 ADD3Q9UEY8 706 aaKnown RBP11.3□□□□□ -0.6
PTPN18-210ENST00000479295 BRPF3Q9ULD4 1205 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 CNPY2Q9Y2B0 182 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 MRPL11Q9Y3B7 192 aaKnown RBP11.3□□□□□ -0.6
PTPN18-210ENST00000479295 SLC12A7Q9Y666 1083 aa11.3□□□□□ -0.6
PTPN18-210ENST00000479295 DNM1LO00429 736 aa11.29□□□□□ -0.6
PTPN18-210ENST00000479295 DUSP11O75319 330 aaKnown RBP11.29□□□□□ -0.6
PTPN18-210ENST00000479295 RPS6KB1P23443 525 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms