RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 TTLL11Q8NHH1 800 aa7.94□□□□□ -1.14
HOXB3-209ENST00000478644 TSR2Q969E8 191 aaKnown RBP7.94□□□□□ -1.14
HOXB3-209ENST00000478644 LACRTQ9GZZ8 138 aa7.94□□□□□ -1.14
HOXB3-209ENST00000478644 DBNDD1Q9H9R9 158 aa7.94□□□□□ -1.14
HOXB3-209ENST00000478644 MED23Q9ULK4 1368 aa7.94□□□□□ -1.14
HOXB3-209ENST00000478644 COL4A5P29400 1685 aa7.93□□□□□ -1.14
HOXB3-209ENST00000478644 A6NHS1 94 aa7.93□□□□□ -1.14
HOXB3-209ENST00000478644 FSCN2O14926 492 aa7.93□□□□□ -1.14
HOXB3-209ENST00000478644 TNFRSF21O75509 655 aa7.93□□□□□ -1.14
HOXB3-209ENST00000478644 EPHA1P21709 976 aa7.93□□□□□ -1.14
HOXB3-209ENST00000478644 GCKRQ14397 625 aa7.93□□□□□ -1.14
HOXB3-209ENST00000478644 KIF4BQ2VIQ3 1234 aa7.93□□□□□ -1.14
HOXB3-209ENST00000478644 PRR23CQ6ZRP0 262 aa7.93□□□□□ -1.14
HOXB3-209ENST00000478644 GJD3Q8N144 294 aa7.93□□□□□ -1.14
HOXB3-209ENST00000478644 TSPYL6Q8N831 410 aa7.93□□□□□ -1.14
HOXB3-209ENST00000478644 TMEM102Q8N9M5 508 aaPredicted RBP7.93□□□□□ -1.14
HOXB3-209ENST00000478644 DNAAF4Q8WXU2 420 aa7.93□□□□□ -1.14
HOXB3-209ENST00000478644 GBA2Q9HCG7 927 aaPredicted RBP7.93□□□□□ -1.14
HOXB3-209ENST00000478644 KANSL3Q9P2N6 904 aa7.93□□□□□ -1.14
HOXB3-209ENST00000478644 FANCIQ9NVI1 1328 aa7.93□□□□□ -1.14
HOXB3-209ENST00000478644 ANKRD18BA2A2Z9 1011 aa7.92□□□□□ -1.14
HOXB3-209ENST00000478644 VAMP4O75379 141 aa7.92□□□□□ -1.14
HOXB3-209ENST00000478644 ALX3O95076 343 aa7.92□□□□□ -1.14
HOXB3-209ENST00000478644 BRD1O95696 1058 aa7.92□□□□□ -1.14
HOXB3-209ENST00000478644 IGKV5-2P06315 115 aa7.92□□□□□ -1.14
HOXB3-209ENST00000478644 CSF1RP07333 972 aa7.92□□□□□ -1.14
HOXB3-209ENST00000478644 HSPA8P11142 646 aaKnown RBP7.92□□□□□ -1.14
HOXB3-209ENST00000478644 CCT4P50991 539 aaKnown RBP7.92□□□□□ -1.14
HOXB3-209ENST00000478644 LBX1P52954 281 aa7.92□□□□□ -1.14
HOXB3-209ENST00000478644 HUNKP57058 714 aa7.92□□□□□ -1.14
HOXB3-209ENST00000478644 FKBP1AP62942 108 aaKnown RBP7.92□□□□□ -1.14
HOXB3-209ENST00000478644 B4GALNT3Q6L9W6 998 aa7.92□□□□□ -1.14
HOXB3-209ENST00000478644 RGMBQ6NW40 437 aa7.92□□□□□ -1.14
HOXB3-209ENST00000478644 C15orf52Q6ZUT6 534 aaKnown RBP7.92□□□□□ -1.14
HOXB3-209ENST00000478644 USP48Q86UV5 1035 aa7.92□□□□□ -1.14
HOXB3-209ENST00000478644 GLIS2Q9BZE0 524 aaPredicted RBP7.92□□□□□ -1.14
HOXB3-209ENST00000478644 MYOZ2Q9NPC6 264 aa7.92□□□□□ -1.14
HOXB3-209ENST00000478644 SEC31BQ9NQW1 1179 aa7.92□□□□□ -1.14
HOXB3-209ENST00000478644 MINPP1Q9UNW1 487 aa7.92□□□□□ -1.14
HOXB3-209ENST00000478644 HDAC5Q9UQL6 1122 aa7.92□□□□□ -1.14
HOXB3-209ENST00000478644 LTBP1Q14766 1721 aa7.92□□□□□ -1.14
HOXB3-209ENST00000478644 PCNTO95613 3336 aa7.91□□□□□ -1.14
HOXB3-209ENST00000478644 ALDH1L1O75891 902 aa7.91□□□□□ -1.14
HOXB3-209ENST00000478644 KCNJ4P48050 445 aa7.91□□□□□ -1.14
HOXB3-209ENST00000478644 EXOSC9Q06265 439 aaKnown RBP7.91□□□□□ -1.14
HOXB3-209ENST00000478644 IFIT5Q13325 482 aaKnown RBP7.91□□□□□ -1.14
HOXB3-209ENST00000478644 ECM1Q16610 540 aa7.91□□□□□ -1.14
HOXB3-209ENST00000478644 TBC1D10BQ4KMP7 808 aaPredicted RBP7.91□□□□□ -1.14
HOXB3-209ENST00000478644 CYP4F22Q6NT55 531 aa7.91□□□□□ -1.14
HOXB3-209ENST00000478644 FAM117BQ6P1L5 589 aa7.91□□□□□ -1.14
HOXB3-209ENST00000478644 OSGEPQ9NPF4 335 aa7.91□□□□□ -1.14
HOXB3-209ENST00000478644 SH2B1Q9NRF2 756 aaPredicted RBP7.91□□□□□ -1.14
HOXB3-209ENST00000478644 KCNK4Q9NYG8 393 aa7.91□□□□□ -1.14
HOXB3-209ENST00000478644 DUOX1Q9NRD9 1551 aa7.91□□□□□ -1.14
HOXB3-209ENST00000478644 THSD7BQ9C0I4 1608 aa7.91□□□□□ -1.14
HOXB3-209ENST00000478644 ZNF804BA4D1E1 1349 aa7.9□□□□□ -1.14
HOXB3-209ENST00000478644 H3BRJ5 948 aa7.9□□□□□ -1.14
HOXB3-209ENST00000478644 PDE2AO00408 941 aaPredicted RBP7.9□□□□□ -1.14
HOXB3-209ENST00000478644 TRAF5O00463 557 aa7.9□□□□□ -1.14
HOXB3-209ENST00000478644 MYO1BO43795 1136 aa7.9□□□□□ -1.14
HOXB3-209ENST00000478644 ICMTO60725 284 aa7.9□□□□□ -1.14
HOXB3-209ENST00000478644 ZNF157P51786 506 aaPredicted RBP7.9□□□□□ -1.14
HOXB3-209ENST00000478644 INHBEP58166 350 aa7.9□□□□□ -1.14
HOXB3-209ENST00000478644 SLFN5Q08AF3 891 aa7.9□□□□□ -1.14
HOXB3-209ENST00000478644 CCDC57Q2TAC2 916 aa7.9□□□□□ -1.14
HOXB3-209ENST00000478644 TTLL5Q6EMB2 1281 aa7.9□□□□□ -1.14
HOXB3-209ENST00000478644 UBE3BQ7Z3V4 1068 aa7.9□□□□□ -1.14
HOXB3-209ENST00000478644 ZNF804AQ7Z570 1209 aa7.9□□□□□ -1.14
HOXB3-209ENST00000478644 APOBEC3FQ8IUX4 373 aaKnown RBP7.9□□□□□ -1.14
HOXB3-209ENST00000478644 TRMT2AQ8IZ69 625 aaKnown RBP7.9□□□□□ -1.14
HOXB3-209ENST00000478644 SNX29Q8TEQ0 813 aa7.9□□□□□ -1.14
HOXB3-209ENST00000478644 NXPE3Q969Y0 559 aa7.9□□□□□ -1.14
HOXB3-209ENST00000478644 GMLQ99445 158 aa7.9□□□□□ -1.14
HOXB3-209ENST00000478644 GREM2Q9H772 168 aa7.9□□□□□ -1.14
HOXB3-209ENST00000478644 ZNF408Q9H9D4 720 aa7.9□□□□□ -1.14
HOXB3-209ENST00000478644 C9orf78Q9NZ63 289 aaPredicted RBP7.9□□□□□ -1.14
HOXB3-209ENST00000478644 SOX13Q9UN79 622 aa7.9□□□□□ -1.14
HOXB3-209ENST00000478644 PPP2R3BQ9Y5P8 575 aa7.9□□□□□ -1.14
HOXB3-209ENST00000478644 COL1A1P02452 1464 aaPredicted RBP7.89□□□□□ -1.15
HOXB3-209ENST00000478644 EREGO14944 169 aa7.89□□□□□ -1.15
HOXB3-209ENST00000478644 WISP1O95388 367 aa7.89□□□□□ -1.15
HOXB3-209ENST00000478644 CT47B1P0C2W7 299 aaPredicted RBP7.89□□□□□ -1.15
HOXB3-209ENST00000478644 EDN3P14138 238 aa7.89□□□□□ -1.15
HOXB3-209ENST00000478644 ACPPP15309 386 aa7.89□□□□□ -1.15
HOXB3-209ENST00000478644 PKN2Q16513 984 aaKnown RBP7.89□□□□□ -1.15
HOXB3-209ENST00000478644 ARTNQ5T4W7 220 aa7.89□□□□□ -1.15
HOXB3-209ENST00000478644 TXNDC11Q6PKC3 985 aa7.89□□□□□ -1.15
HOXB3-209ENST00000478644 ARMC9Q7Z3E5 817 aa7.89□□□□□ -1.15
HOXB3-209ENST00000478644 PTPRCP08575 1304 aa7.88□□□□□ -1.15
HOXB3-209ENST00000478644 ADAM11O75078 769 aa7.88□□□□□ -1.15
HOXB3-209ENST00000478644 PHACTR2O75167 634 aa7.88□□□□□ -1.15
HOXB3-209ENST00000478644 CASP7P55210 303 aa7.88□□□□□ -1.15
HOXB3-209ENST00000478644 SREBF2Q12772 1141 aa7.88□□□□□ -1.15
HOXB3-209ENST00000478644 GRM1Q13255 1194 aa7.88□□□□□ -1.15
HOXB3-209ENST00000478644 AAMPQ13685 434 aa7.88□□□□□ -1.15
HOXB3-209ENST00000478644 TNFAIP1Q13829 316 aa7.88□□□□□ -1.15
HOXB3-209ENST00000478644 UBE4AQ14139 1066 aa7.88□□□□□ -1.15
HOXB3-209ENST00000478644 CWF19L2Q2TBE0 894 aaKnown RBP7.88□□□□□ -1.15
HOXB3-209ENST00000478644 SUPT20HL1Q3ZLR7 823 aa7.88□□□□□ -1.15
HOXB3-209ENST00000478644 TAF7LQ5H9L4 462 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms