RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 PRRT2Q7Z6L0 340 aaPredicted RBP13.53□□□□□ -0.24
PDCD11-204ENST00000478543 HOMER1Q86YM7 354 aa13.53□□□□□ -0.24
PDCD11-204ENST00000478543 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.53□□□□□ -0.24
PDCD11-204ENST00000478543 TRIM22Q8IYM9 498 aa13.53□□□□□ -0.24
PDCD11-204ENST00000478543 FAM184AQ8NB25 1140 aa13.53□□□□□ -0.24
PDCD11-204ENST00000478543 C12orf42Q96LP6 360 aa13.53□□□□□ -0.24
PDCD11-204ENST00000478543 SPZ1Q9BXG8 430 aa13.53□□□□□ -0.24
PDCD11-204ENST00000478543 FBXO28Q9NVF7 368 aa13.53□□□□□ -0.24
PDCD11-204ENST00000478543 V9GY48 417 aaPredicted RBP13.53□□□□□ -0.24
PDCD11-204ENST00000478543 PTPRFP10586 1907 aa13.52□□□□□ -0.24
PDCD11-204ENST00000478543 ADCY3O60266 1144 aa13.52□□□□□ -0.25
PDCD11-204ENST00000478543 TFRCP02786 760 aaKnown RBP13.52□□□□□ -0.25
PDCD11-204ENST00000478543 HOXD10P28358 340 aa13.52□□□□□ -0.25
PDCD11-204ENST00000478543 STAT2P52630 851 aa13.52□□□□□ -0.25
PDCD11-204ENST00000478543 SNAP25P60880 206 aa13.52□□□□□ -0.25
PDCD11-204ENST00000478543 TREML2Q5T2D2 321 aa13.52□□□□□ -0.25
PDCD11-204ENST00000478543 SYDE2Q5VT97 1194 aa13.52□□□□□ -0.25
PDCD11-204ENST00000478543 ADGRF4Q8IZF3 695 aa13.52□□□□□ -0.25
PDCD11-204ENST00000478543 KIFC2Q96AC6 838 aa13.52□□□□□ -0.25
PDCD11-204ENST00000478543 AIFM3Q96NN9 605 aa13.52□□□□□ -0.25
PDCD11-204ENST00000478543 GUCD1Q96NT3 240 aa13.52□□□□□ -0.25
PDCD11-204ENST00000478543 PIGSQ96S52 555 aa13.52□□□□□ -0.25
PDCD11-204ENST00000478543 RNF26Q9BY78 433 aaPredicted RBP13.52□□□□□ -0.25
PDCD11-204ENST00000478543 FEM1BQ9UK73 627 aa13.52□□□□□ -0.25
PDCD11-204ENST00000478543 STK36Q9NRP7 1315 aa13.52□□□□□ -0.25
PDCD11-204ENST00000478543 LOC285556D6RIA3 1793 aa13.52□□□□□ -0.25
PDCD11-204ENST00000478543 PRPF3O43395 683 aaKnown RBP13.51□□□□□ -0.25
PDCD11-204ENST00000478543 FLOT1O75955 427 aa13.51□□□□□ -0.25
PDCD11-204ENST00000478543 MAGEA10P43363 369 aaPredicted RBP13.51□□□□□ -0.25
PDCD11-204ENST00000478543 FCGRTP55899 365 aa13.51□□□□□ -0.25
PDCD11-204ENST00000478543 FAM160B2Q86V87 743 aa13.51□□□□□ -0.25
PDCD11-204ENST00000478543 CHURC1Q8WUH1 139 aa13.51□□□□□ -0.25
PDCD11-204ENST00000478543 RRP36Q96EU6 259 aaKnown RBP13.51□□□□□ -0.25
PDCD11-204ENST00000478543 ALG1Q9BT22 464 aa13.51□□□□□ -0.25
PDCD11-204ENST00000478543 RIOX1Q9H6W3 641 aa13.51□□□□□ -0.25
PDCD11-204ENST00000478543 JMJD4Q9H9V9 463 aa13.51□□□□□ -0.25
PDCD11-204ENST00000478543 DOCK3Q8IZD9 2030 aa13.51□□□□□ -0.25
PDCD11-204ENST00000478543 DEXIO95424 95 aa13.5□□□□□ -0.25
PDCD11-204ENST00000478543 SMARCA1P28370 1054 aa13.5□□□□□ -0.25
PDCD11-204ENST00000478543 BTNL9Q6UXG8 535 aa13.5□□□□□ -0.25
PDCD11-204ENST00000478543 TDHQ8IZJ6 230 aa13.5□□□□□ -0.25
PDCD11-204ENST00000478543 PROCA1Q8NCQ7 364 aaPredicted RBP13.5□□□□□ -0.25
PDCD11-204ENST00000478543 SLF1Q9BQI6 1058 aa13.5□□□□□ -0.25
PDCD11-204ENST00000478543 CWC22Q9HCG8 908 aaKnown RBP13.5□□□□□ -0.25
PDCD11-204ENST00000478543 SEC63Q9UGP8 760 aaKnown RBP13.5□□□□□ -0.25
PDCD11-204ENST00000478543 PRR12Q9ULL5 1215 aa13.5□□□□□ -0.25
PDCD11-204ENST00000478543 KIF3AQ9Y496 699 aa13.5□□□□□ -0.25
PDCD11-204ENST00000478543 MYH6P13533 1939 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 USP17L15C9J2P7 530 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 USP17L13C9JLJ4 530 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 USP17L11C9JVI0 530 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 USP17L18D6R9N7 530 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 USP17L22D6RA61 530 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 USP17L17D6RBQ6 530 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 USP17L19D6RCP7 530 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 USP17L20D6RJB6 530 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 SCG2P13521 617 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 GUCY1B3Q02153 619 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 USP17L24Q0WX57 530 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 TRIM32Q13049 653 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 PKN1Q16512 942 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 CDC37Q16543 378 aaPredicted RBP13.49□□□□□ -0.25
PDCD11-204ENST00000478543 QRICH1Q2TAL8 776 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 LARP1BQ659C4 914 aaKnown RBP13.49□□□□□ -0.25
PDCD11-204ENST00000478543 CCDC174Q6PII3 467 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 CATSPERGQ6ZRH7 1159 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 FASTKD5Q7L8L6 764 aaKnown RBP13.49□□□□□ -0.25
PDCD11-204ENST00000478543 HEATR3Q7Z4Q2 680 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 WASF1Q92558 559 aa13.49□□□□□ -0.25
PDCD11-204ENST00000478543 GPKOWQ92917 476 aaPredicted RBP eCLIP13.49□□□□□ -0.25
PDCD11-204ENST00000478543 VPS37CA5D8V6 355 aaPredicted RBP13.48□□□□□ -0.25
PDCD11-204ENST00000478543 PLA2G6O60733 806 aa13.48□□□□□ -0.25
PDCD11-204ENST00000478543 TAL1P17542 331 aaPredicted RBP13.48□□□□□ -0.25
PDCD11-204ENST00000478543 PFKFB3Q16875 520 aaPredicted RBP13.48□□□□□ -0.25
PDCD11-204ENST00000478543 FOXD4L5Q5VV16 416 aaPredicted RBP13.48□□□□□ -0.25
PDCD11-204ENST00000478543 WWC2Q6AWC2 1192 aa13.48□□□□□ -0.25
PDCD11-204ENST00000478543 NECAB2Q7Z6G3 386 aa13.48□□□□□ -0.25
PDCD11-204ENST00000478543 PRPF38AQ8NAV1 312 aaKnown RBP13.48□□□□□ -0.25
PDCD11-204ENST00000478543 PXYLP1Q8TE99 480 aa13.48□□□□□ -0.25
PDCD11-204ENST00000478543 FOXD4L4Q8WXT5 416 aaPredicted RBP13.48□□□□□ -0.25
PDCD11-204ENST00000478543 ATG4CQ96DT6 458 aa13.48□□□□□ -0.25
PDCD11-204ENST00000478543 C8orf76Q96K31 380 aa13.48□□□□□ -0.25
PDCD11-204ENST00000478543 PARK7Q99497 189 aaKnown RBP13.48□□□□□ -0.25
PDCD11-204ENST00000478543 GJB4Q9NTQ9 266 aa13.48□□□□□ -0.25
PDCD11-204ENST00000478543 VPS54Q9P1Q0 977 aa13.48□□□□□ -0.25
PDCD11-204ENST00000478543 PPP1R9AQ9ULJ8 1098 aa13.48□□□□□ -0.25
PDCD11-204ENST00000478543 AGTPBP1Q9UPW5 1226 aa13.48□□□□□ -0.25
PDCD11-204ENST00000478543 CTDP1Q9Y5B0 961 aaPredicted RBP13.48□□□□□ -0.25
PDCD11-204ENST00000478543 PFASO15067 1338 aa13.47□□□□□ -0.25
PDCD11-204ENST00000478543 PNMA6FA0A0J9YX94 578 aa13.47□□□□□ -0.25
PDCD11-204ENST00000478543 H3BQV1 296 aa13.47□□□□□ -0.25
PDCD11-204ENST00000478543 ZBTB5O15062 677 aa13.47□□□□□ -0.25
PDCD11-204ENST00000478543 PDCP20941 246 aa13.47□□□□□ -0.25
PDCD11-204ENST00000478543 SYT1P21579 422 aa13.47□□□□□ -0.25
PDCD11-204ENST00000478543 DSG3P32926 999 aa13.47□□□□□ -0.25
PDCD11-204ENST00000478543 DDIT3P35638 169 aa13.47□□□□□ -0.25
PDCD11-204ENST00000478543 IRX3P78415 501 aaPredicted RBP13.47□□□□□ -0.25
PDCD11-204ENST00000478543 IRF5Q13568 498 aa13.47□□□□□ -0.25
PDCD11-204ENST00000478543 COA7Q96BR5 231 aa13.47□□□□□ -0.25
PDCD11-204ENST00000478543 MTMR8Q96EF0 704 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms