RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 NRDCO43847 1150 aa6.06□□□□□ -1.44
CCNL1-220ENST00000478454 ADCY3O60266 1144 aa6.06□□□□□ -1.44
CCNL1-220ENST00000478454 PPP1R11O60927 126 aaPredicted RBP6.06□□□□□ -1.44
CCNL1-220ENST00000478454 PLS3P13797 630 aa6.06□□□□□ -1.44
CCNL1-220ENST00000478454 CHRNEQ04844 493 aa6.06□□□□□ -1.44
CCNL1-220ENST00000478454 SOGA3Q5TF21 947 aa6.06□□□□□ -1.44
CCNL1-220ENST00000478454 NLRX1Q86UT6 975 aa6.06□□□□□ -1.44
CCNL1-220ENST00000478454 ZSWIM9Q86XI8 627 aa6.06□□□□□ -1.44
CCNL1-220ENST00000478454 CPNE8Q86YQ8 564 aa6.06□□□□□ -1.44
CCNL1-220ENST00000478454 SPPL2CQ8IUH8 684 aa6.06□□□□□ -1.44
CCNL1-220ENST00000478454 SIRT2Q8IXJ6 389 aa6.06□□□□□ -1.44
CCNL1-220ENST00000478454 NAT16Q8N8M0 369 aa6.06□□□□□ -1.44
CCNL1-220ENST00000478454 KREMEN2Q8NCW0 462 aa6.06□□□□□ -1.44
CCNL1-220ENST00000478454 NPLOC4Q8TAT6 608 aa6.06□□□□□ -1.44
CCNL1-220ENST00000478454 FAM168AQ92567 244 aa6.06□□□□□ -1.44
CCNL1-220ENST00000478454 LIN37Q96GY3 246 aaPredicted RBP6.06□□□□□ -1.44
CCNL1-220ENST00000478454 C1orf159Q96HA4 380 aa6.06□□□□□ -1.44
CCNL1-220ENST00000478454 DNAJC7Q99615 494 aa6.06□□□□□ -1.44
CCNL1-220ENST00000478454 OSBPL2Q9H1P3 480 aa6.06□□□□□ -1.44
CCNL1-220ENST00000478454 CLEC1BQ9P126 229 aa6.06□□□□□ -1.44
CCNL1-220ENST00000478454 TMEFF2Q9UIK5 374 aaPredicted RBP6.06□□□□□ -1.44
CCNL1-220ENST00000478454 SCG5P05408 212 aa6.05□□□□□ -1.44
CCNL1-220ENST00000478454 MSL3P1P0C860 447 aa6.05□□□□□ -1.44
CCNL1-220ENST00000478454 RAC2P15153 192 aa6.05□□□□□ -1.44
CCNL1-220ENST00000478454 ENDOUP21128 410 aaKnown RBP6.05□□□□□ -1.44
CCNL1-220ENST00000478454 SEPHS1P49903 392 aa6.05□□□□□ -1.44
CCNL1-220ENST00000478454 GFRA1P56159 465 aa6.05□□□□□ -1.44
CCNL1-220ENST00000478454 SLC14A2Q15849 920 aa6.05□□□□□ -1.44
CCNL1-220ENST00000478454 KCNMB1Q16558 191 aa6.05□□□□□ -1.44
CCNL1-220ENST00000478454 CCDC144BQ3MJ40 725 aa6.05□□□□□ -1.44
CCNL1-220ENST00000478454 MTERF2Q49AM1 385 aa6.05□□□□□ -1.44
CCNL1-220ENST00000478454 FOXB2Q5VYV0 432 aa6.05□□□□□ -1.44
CCNL1-220ENST00000478454 CCDC103Q8IW40 242 aa6.05□□□□□ -1.44
CCNL1-220ENST00000478454 CRACR2BQ8N4Y2 399 aaPredicted RBP6.05□□□□□ -1.44
CCNL1-220ENST00000478454 TMEM145Q8NBT3 493 aa6.05□□□□□ -1.44
CCNL1-220ENST00000478454 MKL1Q969V6 931 aa6.05□□□□□ -1.44
CCNL1-220ENST00000478454 SGSM3Q96HU1 749 aa6.05□□□□□ -1.44
CCNL1-220ENST00000478454 SRPK1Q96SB4 655 aaKnown RBP6.05□□□□□ -1.44
CCNL1-220ENST00000478454 PIF1Q9H611 641 aa6.05□□□□□ -1.44
CCNL1-220ENST00000478454 FBLN5Q9UBX5 448 aa6.05□□□□□ -1.44
CCNL1-220ENST00000478454 GPR160Q9UJ42 338 aa6.05□□□□□ -1.44
CCNL1-220ENST00000478454 CDK11AQ9UQ88 783 aaPredicted RBP6.05□□□□□ -1.44
CCNL1-220ENST00000478454 A0A1W2PQ45 241 aaPredicted RBP6.04□□□□□ -1.44
CCNL1-220ENST00000478454 A0A1W2PQY0 241 aa6.04□□□□□ -1.44
CCNL1-220ENST00000478454 DLX3O60479 287 aa6.04□□□□□ -1.44
CCNL1-220ENST00000478454 GLI1P08151 1106 aa6.04□□□□□ -1.44
CCNL1-220ENST00000478454 SNRPB2P08579 225 aaKnown RBP6.04□□□□□ -1.44
CCNL1-220ENST00000478454 SDHBP21912 280 aa6.04□□□□□ -1.44
CCNL1-220ENST00000478454 HOXC12P31275 282 aa6.04□□□□□ -1.44
CCNL1-220ENST00000478454 ECI1P42126 302 aa6.04□□□□□ -1.44
CCNL1-220ENST00000478454 MVKQ03426 396 aa6.04□□□□□ -1.44
CCNL1-220ENST00000478454 BMS1Q14692 1282 aaKnown RBP6.04□□□□□ -1.44
CCNL1-220ENST00000478454 INF2Q27J81 1249 aa6.04□□□□□ -1.44
CCNL1-220ENST00000478454 TMEM67Q5HYA8 995 aa6.04□□□□□ -1.44
CCNL1-220ENST00000478454 HLA-DQA1Q5Y7H0 255 aa6.04□□□□□ -1.44
CCNL1-220ENST00000478454 CYP2R1Q6VVX0 501 aa6.04□□□□□ -1.44
CCNL1-220ENST00000478454 DPH6Q7L8W6 267 aa6.04□□□□□ -1.44
CCNL1-220ENST00000478454 LILRA2Q8N149 483 aa6.04□□□□□ -1.44
CCNL1-220ENST00000478454 OSBP2Q969R2 916 aa6.04□□□□□ -1.44
CCNL1-220ENST00000478454 ZNF669Q96BR6 464 aaPredicted RBP6.04□□□□□ -1.44
CCNL1-220ENST00000478454 IER2Q9BTL4 223 aa6.04□□□□□ -1.44
CCNL1-220ENST00000478454 SPATA9Q9BWV2 254 aa6.04□□□□□ -1.44
CCNL1-220ENST00000478454 KCNK12Q9HB15 430 aa6.04□□□□□ -1.44
CCNL1-220ENST00000478454 IMPACTQ9P2X3 320 aa6.04□□□□□ -1.44
CCNL1-220ENST00000478454 YBX2Q9Y2T7 364 aaKnown RBP6.04□□□□□ -1.44
CCNL1-220ENST00000478454 NPHP3-ACAD11A0A0J9YXS1 232 aa6.03□□□□□ -1.44
CCNL1-220ENST00000478454 AGRPO00253 132 aa6.03□□□□□ -1.44
CCNL1-220ENST00000478454 TBC1D8O95759 1140 aa6.03□□□□□ -1.44
CCNL1-220ENST00000478454 FAM153BP0C7A2 387 aa6.03□□□□□ -1.44
CCNL1-220ENST00000478454 PRKCAP17252 672 aa6.03□□□□□ -1.44
CCNL1-220ENST00000478454 SSRP1Q08945 709 aaKnown RBP6.03□□□□□ -1.44
CCNL1-220ENST00000478454 LAPTM5Q13571 262 aa6.03□□□□□ -1.44
CCNL1-220ENST00000478454 HSP90AA2PQ14568 343 aaPredicted RBP6.03□□□□□ -1.44
CCNL1-220ENST00000478454 SLC35F1Q5T1Q4 408 aa6.03□□□□□ -1.44
CCNL1-220ENST00000478454 LRP10Q7Z4F1 713 aa6.03□□□□□ -1.44
CCNL1-220ENST00000478454 LILRB2Q8N423 598 aa6.03□□□□□ -1.44
CCNL1-220ENST00000478454 ASIC4Q96FT7 647 aa6.03□□□□□ -1.44
CCNL1-220ENST00000478454 ZSWIM4Q9H7M6 989 aa6.03□□□□□ -1.44
CCNL1-220ENST00000478454 ACSL6Q9UKU0 697 aa6.03□□□□□ -1.44
CCNL1-220ENST00000478454 C7orf72A4D263 438 aa6.02□□□□□ -1.45
CCNL1-220ENST00000478454 IQCA1LA6NCM1 817 aa6.02□□□□□ -1.45
CCNL1-220ENST00000478454 WTIPA6NIX2 430 aaPredicted RBP6.02□□□□□ -1.45
CCNL1-220ENST00000478454 PRODHO43272 600 aa6.02□□□□□ -1.45
CCNL1-220ENST00000478454 PAMP19021 973 aa6.02□□□□□ -1.45
CCNL1-220ENST00000478454 KCNJ6P48051 423 aa6.02□□□□□ -1.45
CCNL1-220ENST00000478454 SNX17Q15036 470 aa6.02□□□□□ -1.45
CCNL1-220ENST00000478454 GALNT18Q6P9A2 607 aa6.02□□□□□ -1.45
CCNL1-220ENST00000478454 KSR1Q8IVT5 923 aa6.02□□□□□ -1.45
CCNL1-220ENST00000478454 LRRC47Q8N1G4 583 aaKnown RBP6.02□□□□□ -1.45
CCNL1-220ENST00000478454 DPF3Q92784 378 aa6.02□□□□□ -1.45
CCNL1-220ENST00000478454 AARSD1Q9BTE6 412 aaKnown RBP6.02□□□□□ -1.45
CCNL1-220ENST00000478454 KANSL2Q9H9L4 492 aa6.02□□□□□ -1.45
CCNL1-220ENST00000478454 USP35Q9P2H5 1018 aa6.02□□□□□ -1.45
CCNL1-220ENST00000478454 TAF6LQ9Y6J9 622 aa6.02□□□□□ -1.45
CCNL1-220ENST00000478454 KDM2BQ8NHM5 1336 aa6.01□□□□□ -1.45
CCNL1-220ENST00000478454 BLACEA4D250 179 aa6.01□□□□□ -1.45
CCNL1-220ENST00000478454 FGFR1P11362 822 aa6.01□□□□□ -1.45
CCNL1-220ENST00000478454 PABPC1P11940 636 aaKnown RBP6.01□□□□□ -1.45
CCNL1-220ENST00000478454 LCP1P13796 627 aa6.01□□□□□ -1.45
CCNL1-220ENST00000478454 L1CAMP32004 1257 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms