RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 FAM126BQ8IXS8 530 aa15.36■□□□□ 0.05
ABCF3-212ENST00000478288 SLC43A3Q8NBI5 491 aa15.36■□□□□ 0.05
ABCF3-212ENST00000478288 MORC4Q8TE76 937 aa15.36■□□□□ 0.05
ABCF3-212ENST00000478288 CYP39A1Q9NYL5 469 aa15.36■□□□□ 0.05
ABCF3-212ENST00000478288 ISY1Q9ULR0 285 aaKnown RBP15.36■□□□□ 0.05
ABCF3-212ENST00000478288 Q9Y3F1 56 aa15.36■□□□□ 0.05
ABCF3-212ENST00000478288 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.35■□□□□ 0.05
ABCF3-212ENST00000478288 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.35■□□□□ 0.05
ABCF3-212ENST00000478288 SOWAHBA6NEL2 793 aa15.35■□□□□ 0.05
ABCF3-212ENST00000478288 TLR3O15455 904 aaKnown RBP15.35■□□□□ 0.05
ABCF3-212ENST00000478288 ICAM1P05362 532 aa15.35■□□□□ 0.05
ABCF3-212ENST00000478288 PCP11498 1178 aaKnown RBP15.35■□□□□ 0.05
ABCF3-212ENST00000478288 PDE1AP54750 535 aa15.35■□□□□ 0.05
ABCF3-212ENST00000478288 CTDSPL2Q05D32 466 aa15.35■□□□□ 0.05
ABCF3-212ENST00000478288 PPIGQ13427 754 aaKnown RBP eCLIP15.35■□□□□ 0.053e-6■□□□□ 9.2
ABCF3-212ENST00000478288 BTNL9Q6UXG8 535 aa15.35■□□□□ 0.05
ABCF3-212ENST00000478288 KCTD1Q719H9 257 aa15.35■□□□□ 0.05
ABCF3-212ENST00000478288 RANBP17Q9H2T7 1088 aaKnown RBP15.35■□□□□ 0.05
ABCF3-212ENST00000478288 VTA1Q9NP79 307 aa15.35■□□□□ 0.05
ABCF3-212ENST00000478288 TCP11L1Q9NUJ3 509 aa15.35■□□□□ 0.05
ABCF3-212ENST00000478288 PNMA2Q9UL42 364 aa15.35■□□□□ 0.05
ABCF3-212ENST00000478288 ASTN1O14525 1302 aa15.35■□□□□ 0.05
ABCF3-212ENST00000478288 TRANK1O15050 2925 aa15.34■□□□□ 0.05
ABCF3-212ENST00000478288 RANBP6O60518 1105 aaKnown RBP15.34■□□□□ 0.05
ABCF3-212ENST00000478288 NMT2O60551 498 aa15.34■□□□□ 0.05
ABCF3-212ENST00000478288 CD4P01730 458 aa15.34■□□□□ 0.05
ABCF3-212ENST00000478288 ALAS1P13196 640 aa15.34■□□□□ 0.05
ABCF3-212ENST00000478288 NT5C2P49902 561 aa15.34■□□□□ 0.05
ABCF3-212ENST00000478288 IRX5P78411 483 aaPredicted RBP15.34■□□□□ 0.05
ABCF3-212ENST00000478288 AAMPQ13685 434 aa15.34■□□□□ 0.05
ABCF3-212ENST00000478288 MCMDC2Q4G0Z9 681 aa15.34■□□□□ 0.05
ABCF3-212ENST00000478288 ANKRD45Q5TZF3 282 aa15.34■□□□□ 0.05
ABCF3-212ENST00000478288 RASIP1Q5U651 963 aa15.34■□□□□ 0.05
ABCF3-212ENST00000478288 VPS53Q5VIR6 699 aa15.34■□□□□ 0.05
ABCF3-212ENST00000478288 PSRC1Q6PGN9 363 aaPredicted RBP15.34■□□□□ 0.05
ABCF3-212ENST00000478288 TLK2Q86UE8 772 aa15.34■□□□□ 0.05
ABCF3-212ENST00000478288 TMEM199Q8N511 208 aa15.34■□□□□ 0.05
ABCF3-212ENST00000478288 MAFAQ8NHW3 353 aaPredicted RBP15.34■□□□□ 0.05
ABCF3-212ENST00000478288 CCPG1Q9ULG6 757 aa15.34■□□□□ 0.05
ABCF3-212ENST00000478288 LAMA4Q16363 1823 aa15.33■□□□□ 0.05
ABCF3-212ENST00000478288 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.33■□□□□ 0.04
ABCF3-212ENST00000478288 ZEB2O60315 1214 aa15.33■□□□□ 0.04
ABCF3-212ENST00000478288 FGAP02671 866 aa15.33■□□□□ 0.04
ABCF3-212ENST00000478288 TOP1P11387 765 aaKnown RBP15.33■□□□□ 0.04
ABCF3-212ENST00000478288 DNAJB2P25686 324 aa15.33■□□□□ 0.04
ABCF3-212ENST00000478288 FSCN1Q16658 493 aaKnown RBP15.33■□□□□ 0.04
ABCF3-212ENST00000478288 IQSEC1Q6DN90 963 aa15.33■□□□□ 0.04
ABCF3-212ENST00000478288 VTI1AQ96AJ9 217 aa15.33■□□□□ 0.04
ABCF3-212ENST00000478288 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.33■□□□□ 0.04
ABCF3-212ENST00000478288 SCN10AQ9Y5Y9 1956 aa15.33■□□□□ 0.04
ABCF3-212ENST00000478288 FOSL2P15408 326 aa15.32■□□□□ 0.04
ABCF3-212ENST00000478288 SMPD1P17405 629 aa15.32■□□□□ 0.04
ABCF3-212ENST00000478288 CCDC96Q2M329 555 aa15.32■□□□□ 0.04
ABCF3-212ENST00000478288 MUM1L1Q5H9M0 696 aa15.32■□□□□ 0.04
ABCF3-212ENST00000478288 TMEM240Q5SV17 173 aa15.32■□□□□ 0.04
ABCF3-212ENST00000478288 TAPT1Q6NXT6 567 aa15.32■□□□□ 0.04
ABCF3-212ENST00000478288 MYLIPQ8WY64 445 aa15.32■□□□□ 0.04
ABCF3-212ENST00000478288 COL25A1Q9BXS0 654 aaPredicted RBP15.32■□□□□ 0.04
ABCF3-212ENST00000478288 AP5M1Q9H0R1 490 aa15.32■□□□□ 0.04
ABCF3-212ENST00000478288 INCENPQ9NQS7 918 aa15.32■□□□□ 0.04
ABCF3-212ENST00000478288 ADD3Q9UEY8 706 aaKnown RBP15.32■□□□□ 0.04
ABCF3-212ENST00000478288 A0A0D9SFI3 127 aa15.31■□□□□ 0.04
ABCF3-212ENST00000478288 HSPD1P10809 573 aaKnown RBP15.31■□□□□ 0.04
ABCF3-212ENST00000478288 CSF2RAP15509 400 aa15.31■□□□□ 0.04
ABCF3-212ENST00000478288 BEX3Q00994 111 aa15.31■□□□□ 0.04
ABCF3-212ENST00000478288 SYDE2Q5VT97 1194 aa15.31■□□□□ 0.04
ABCF3-212ENST00000478288 CXCL17Q6UXB2 119 aa15.31■□□□□ 0.04
ABCF3-212ENST00000478288 NOL8Q76FK4 1167 aaKnown RBP15.31■□□□□ 0.04
ABCF3-212ENST00000478288 C16orf59Q7L2K0 433 aa15.31■□□□□ 0.04
ABCF3-212ENST00000478288 RASGRP2Q7LDG7 609 aa15.31■□□□□ 0.04
ABCF3-212ENST00000478288 FBXO16Q8IX29 292 aaPredicted RBP15.31■□□□□ 0.04
ABCF3-212ENST00000478288 FAM227BQ96M60 508 aa15.31■□□□□ 0.04
ABCF3-212ENST00000478288 TTC14Q96N46 770 aa15.31■□□□□ 0.04
ABCF3-212ENST00000478288 TMEM47Q9BQJ4 181 aa15.31■□□□□ 0.04
ABCF3-212ENST00000478288 BDP1A6H8Y1 2624 aa15.3■□□□□ 0.04
ABCF3-212ENST00000478288 SNHG28P0DPA3 235 aa15.3■□□□□ 0.04
ABCF3-212ENST00000478288 PDHBP11177 359 aa15.3■□□□□ 0.04
ABCF3-212ENST00000478288 ITGA7Q13683 1181 aa15.3■□□□□ 0.04
ABCF3-212ENST00000478288 DUSP28Q4G0W2 176 aa15.3■□□□□ 0.04
ABCF3-212ENST00000478288 CCDC171Q6TFL3 1326 aa15.3■□□□□ 0.04
ABCF3-212ENST00000478288 NSMFQ6X4W1 530 aa15.3■□□□□ 0.04
ABCF3-212ENST00000478288 WDR19Q8NEZ3 1342 aa15.3■□□□□ 0.04
ABCF3-212ENST00000478288 GBF1Q92538 1859 aa15.3■□□□□ 0.04
ABCF3-212ENST00000478288 TIFAQ96CG3 184 aa15.3■□□□□ 0.04
ABCF3-212ENST00000478288 CRBNQ96SW2 442 aa15.3■□□□□ 0.04
ABCF3-212ENST00000478288 MAF1Q9H063 256 aa15.3■□□□□ 0.04
ABCF3-212ENST00000478288 IL23AQ9NPF7 189 aa15.3■□□□□ 0.04
ABCF3-212ENST00000478288 MYH6P13533 1939 aa15.29■□□□□ 0.04
ABCF3-212ENST00000478288 GRIN2DO15399 1336 aa15.29■□□□□ 0.04
ABCF3-212ENST00000478288 RBM47A0AV96 593 aaKnown RBP15.29■□□□□ 0.04
ABCF3-212ENST00000478288 ALDH5A1P51649 535 aaPredicted RBP15.29■□□□□ 0.04
ABCF3-212ENST00000478288 MFAP1P55081 439 aaKnown RBP15.29■□□□□ 0.04
ABCF3-212ENST00000478288 SNAP25P60880 206 aa15.29■□□□□ 0.04
ABCF3-212ENST00000478288 BAATQ14032 418 aaPredicted RBP15.29■□□□□ 0.04
ABCF3-212ENST00000478288 TTBK2Q6IQ55 1244 aa15.29■□□□□ 0.04
ABCF3-212ENST00000478288 ZNF589Q86UQ0 364 aaPredicted RBP15.29■□□□□ 0.04
ABCF3-212ENST00000478288 HERVK_113Q902F9 699 aa15.29■□□□□ 0.04
ABCF3-212ENST00000478288 PPP1R12CQ9BZL4 782 aa15.29■□□□□ 0.04
ABCF3-212ENST00000478288 MTIF3Q9H2K0 278 aaKnown RBP15.29■□□□□ 0.04
ABCF3-212ENST00000478288 HIPK3Q9H422 1215 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms