RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 MAPK4P31152 587 aa23.05■■□□□ 1.28
ACTB-210ENST00000477812 SSRP1Q08945 709 aaKnown RBP23.05■■□□□ 1.28
ACTB-210ENST00000477812 TYW1BQ6NUM6 668 aa23.05■■□□□ 1.28
ACTB-210ENST00000477812 TRIM22Q8IYM9 498 aa23.05■■□□□ 1.28
ACTB-210ENST00000477812 CHST13Q8NET6 341 aa23.05■■□□□ 1.28
ACTB-210ENST00000477812 SHISA4Q96DD7 197 aa23.05■■□□□ 1.28
ACTB-210ENST00000477812 TRIM47Q96LD4 638 aa23.05■■□□□ 1.28
ACTB-210ENST00000477812 HOMER2Q9NSB8 354 aa23.05■■□□□ 1.28
ACTB-210ENST00000477812 PCDHA1Q9Y5I3 950 aa23.05■■□□□ 1.28
ACTB-210ENST00000477812 MGAMO43451 1857 aa23.05■■□□□ 1.28
ACTB-210ENST00000477812 ZNF236Q9UL36 1845 aa23.04■■□□□ 1.28
ACTB-210ENST00000477812 NFIBO00712 420 aa23.04■■□□□ 1.28
ACTB-210ENST00000477812 NCAPG2Q86XI2 1143 aa23.04■■□□□ 1.28
ACTB-210ENST00000477812 GPKOWQ92917 476 aaPredicted RBP eCLIP23.04■■□□□ 1.28
ACTB-210ENST00000477812 COA7Q96BR5 231 aa23.04■■□□□ 1.28
ACTB-210ENST00000477812 TRERF1Q96PN7 1200 aa23.04■■□□□ 1.28
ACTB-210ENST00000477812 STXBP3O00186 592 aa23.03■■□□□ 1.28
ACTB-210ENST00000477812 DEXIO95424 95 aa23.03■■□□□ 1.28
ACTB-210ENST00000477812 HEATR3Q7Z4Q2 680 aa23.03■■□□□ 1.28
ACTB-210ENST00000477812 GPR142Q7Z601 462 aa23.03■■□□□ 1.28
ACTB-210ENST00000477812 HSCBQ8IWL3 235 aa23.03■■□□□ 1.28
ACTB-210ENST00000477812 CD99L2Q8TCZ2 262 aa23.03■■□□□ 1.28
ACTB-210ENST00000477812 AIFM3Q96NN9 605 aa23.03■■□□□ 1.28
ACTB-210ENST00000477812 ACAD9Q9H845 621 aa23.03■■□□□ 1.28
ACTB-210ENST00000477812 BARHL2Q9NY43 387 aa23.03■■□□□ 1.28
ACTB-210ENST00000477812 ORC3Q9UBD5 711 aaPredicted RBP23.03■■□□□ 1.28
ACTB-210ENST00000477812 FBXO40Q9UH90 709 aa23.03■■□□□ 1.28
ACTB-210ENST00000477812 hCG_1984214I3L0E3 225 aa23.02■■□□□ 1.28
ACTB-210ENST00000477812 PSMC4P43686 418 aa23.02■■□□□ 1.28
ACTB-210ENST00000477812 SLC4A3P48751 1232 aa23.02■■□□□ 1.28
ACTB-210ENST00000477812 CTCFP49711 727 aaPredicted RBP23.02■■□□□ 1.28
ACTB-210ENST00000477812 FCGRTP55899 365 aa23.02■■□□□ 1.28
ACTB-210ENST00000477812 AKAP17AQ02040 695 aaKnown RBP23.02■■□□□ 1.28
ACTB-210ENST00000477812 GHRHRQ02643 423 aa23.02■■□□□ 1.28
ACTB-210ENST00000477812 TRAF1Q13077 416 aa23.02■■□□□ 1.28
ACTB-210ENST00000477812 ZNF713Q8N859 430 aaPredicted RBP23.02■■□□□ 1.28
ACTB-210ENST00000477812 PLXNB2O15031 1838 aa23.02■■□□□ 1.28
ACTB-210ENST00000477812 RBBP6Q7Z6E9 1792 aaKnown RBP23.01■■□□□ 1.27
ACTB-210ENST00000477812 GRB14Q14449 540 aa23.01■■□□□ 1.27
ACTB-210ENST00000477812 PPP1R18Q6NYC8 613 aa23.01■■□□□ 1.27
ACTB-210ENST00000477812 PLEKHH3Q7Z736 793 aa23.01■■□□□ 1.27
ACTB-210ENST00000477812 ABRAQ8N0Z2 381 aa23.01■■□□□ 1.27
ACTB-210ENST00000477812 DDX11Q96FC9 970 aa23.01■■□□□ 1.27
ACTB-210ENST00000477812 ERO1AQ96HE7 468 aa23.01■■□□□ 1.27
ACTB-210ENST00000477812 A1CFQ9NQ94 594 aaKnown RBP23.01■■□□□ 1.27
ACTB-210ENST00000477812 MRPL11Q9Y3B7 192 aaKnown RBP23.01■■□□□ 1.27
ACTB-210ENST00000477812 DOCK3Q8IZD9 2030 aa23.01■■□□□ 1.27
ACTB-210ENST00000477812 TNPO2O14787 897 aaKnown RBP23■■□□□ 1.27
ACTB-210ENST00000477812 PTPREP23469 700 aa23■■□□□ 1.27
ACTB-210ENST00000477812 MORN1Q5T089 497 aa23■■□□□ 1.27
ACTB-210ENST00000477812 RGS22Q8NE09 1264 aa23■■□□□ 1.27
ACTB-210ENST00000477812 USP6NLQ92738 828 aa23■■□□□ 1.27
ACTB-210ENST00000477812 GJD2Q9UKL4 321 aa23■■□□□ 1.27
ACTB-210ENST00000477812 DNAJC25-GNG10A0A024R161 153 aa22.99■■□□□ 1.27
ACTB-210ENST00000477812 STRNO43815 780 aa22.99■■□□□ 1.27
ACTB-210ENST00000477812 ECM2O94769 699 aaPredicted RBP22.99■■□□□ 1.27
ACTB-210ENST00000477812 LBX1P52954 281 aa22.99■■□□□ 1.27
ACTB-210ENST00000477812 HMGN5P82970 282 aaKnown RBP22.99■■□□□ 1.27
ACTB-210ENST00000477812 WDR78Q5VTH9 848 aa22.99■■□□□ 1.27
ACTB-210ENST00000477812 CCAR1Q8IX12 1150 aaKnown RBP22.99■■□□□ 1.27
ACTB-210ENST00000477812 MAF1Q9H063 256 aa22.99■■□□□ 1.27
ACTB-210ENST00000477812 TSHZ2Q9NRE2 1034 aa22.99■■□□□ 1.27
ACTB-210ENST00000477812 LCTP09848 1927 aa22.98■■□□□ 1.27
ACTB-210ENST00000477812 ESYT2A0FGR8 921 aa22.98■■□□□ 1.27
ACTB-210ENST00000477812 SLC15A5A6NIM6 579 aa22.98■■□□□ 1.27
ACTB-210ENST00000477812 FCER1AP12319 257 aa22.98■■□□□ 1.27
ACTB-210ENST00000477812 HSD17B4P51659 736 aa22.98■■□□□ 1.27
ACTB-210ENST00000477812 KIF22Q14807 665 aa22.98■■□□□ 1.27
ACTB-210ENST00000477812 TBC1D5Q92609 795 aa22.98■■□□□ 1.27
ACTB-210ENST00000477812 INTS4Q96HW7 963 aaKnown RBP22.98■■□□□ 1.27
ACTB-210ENST00000477812 MMP19Q99542 508 aa22.98■■□□□ 1.27
ACTB-210ENST00000477812 SH3GLB2Q9NR46 395 aa22.98■■□□□ 1.27
ACTB-210ENST00000477812 CYP39A1Q9NYL5 469 aa22.98■■□□□ 1.27
ACTB-210ENST00000477812 VPS54Q9P1Q0 977 aa22.98■■□□□ 1.27
ACTB-210ENST00000477812 HTTP42858 3142 aa22.97■■□□□ 1.27
ACTB-210ENST00000477812 ADORA2AP29274 412 aa22.97■■□□□ 1.27
ACTB-210ENST00000477812 NAPAP54920 295 aa22.97■■□□□ 1.27
ACTB-210ENST00000477812 SLC30A10Q6XR72 485 aa22.97■■□□□ 1.27
ACTB-210ENST00000477812 FAM177A1Q8N128 213 aaPredicted RBP22.97■■□□□ 1.27
ACTB-210ENST00000477812 SOCS4Q8WXH5 440 aa22.97■■□□□ 1.27
ACTB-210ENST00000477812 ALG1Q9BT22 464 aa22.97■■□□□ 1.27
ACTB-210ENST00000477812 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.97■■□□□ 1.27
ACTB-210ENST00000477812 IVNS1ABPQ9Y6Y0 642 aa22.97■■□□□ 1.27
ACTB-210ENST00000477812 CASP8AP2Q9UKL3 1982 aa22.97■■□□□ 1.27
ACTB-210ENST00000477812 PFASO15067 1338 aa22.97■■□□□ 1.27
ACTB-210ENST00000477812 GNRH1P01148 92 aa22.96■■□□□ 1.27
ACTB-210ENST00000477812 RPS6P62753 249 aaKnown RBP22.96■■□□□ 1.27
ACTB-210ENST00000477812 KCTD2Q14681 263 aa22.96■■□□□ 1.27
ACTB-210ENST00000477812 NPY5RQ15761 445 aa22.96■■□□□ 1.27
ACTB-210ENST00000477812 NSMFQ6X4W1 530 aa22.96■■□□□ 1.27
ACTB-210ENST00000477812 MCF2L2Q86YR7 1114 aa22.96■■□□□ 1.27
ACTB-210ENST00000477812 WASF1Q92558 559 aa22.96■■□□□ 1.27
ACTB-210ENST00000477812 ZMYND12Q9H0C1 365 aa22.96■■□□□ 1.27
ACTB-210ENST00000477812 GJB4Q9NTQ9 266 aa22.96■■□□□ 1.27
ACTB-210ENST00000477812 PIK3CDO00329 1044 aa22.95■■□□□ 1.26
ACTB-210ENST00000477812 ASTN1O14525 1302 aa22.95■■□□□ 1.26
ACTB-210ENST00000477812 MEIS2O14770 477 aa22.95■■□□□ 1.26
ACTB-210ENST00000477812 ADAMTS3O15072 1205 aa22.95■■□□□ 1.26
ACTB-210ENST00000477812 COBLO75128 1261 aa22.95■■□□□ 1.26
ACTB-210ENST00000477812 HOXC6P09630 235 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms