RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 ZNF503-AS2A6NEH8 195 aa6.91□□□□□ -1.3
SMNDC1-205ENST00000477763 WTIPA6NIX2 430 aaPredicted RBP6.91□□□□□ -1.3
SMNDC1-205ENST00000477763 CCDC85CA6NKD9 419 aa6.91□□□□□ -1.3
SMNDC1-205ENST00000477763 AGRPO00253 132 aa6.91□□□□□ -1.3
SMNDC1-205ENST00000477763 VAMP4O75379 141 aa6.91□□□□□ -1.3
SMNDC1-205ENST00000477763 TRHRP34981 398 aaPredicted RBP6.91□□□□□ -1.3
SMNDC1-205ENST00000477763 RBM10P98175 930 aaKnown RBP6.91□□□□□ -1.3
SMNDC1-205ENST00000477763 SLC10A6Q3KNW5 377 aa6.91□□□□□ -1.3
SMNDC1-205ENST00000477763 TIGD5Q53EQ6 642 aa6.91□□□□□ -1.3
SMNDC1-205ENST00000477763 GALNT18Q6P9A2 607 aa6.91□□□□□ -1.3
SMNDC1-205ENST00000477763 NLRX1Q86UT6 975 aa6.91□□□□□ -1.3
SMNDC1-205ENST00000477763 ZNF227Q86WZ6 799 aa6.91□□□□□ -1.3
SMNDC1-205ENST00000477763 SHISA4Q96DD7 197 aa6.91□□□□□ -1.3
SMNDC1-205ENST00000477763 PTCHD1Q96NR3 888 aa6.91□□□□□ -1.3
SMNDC1-205ENST00000477763 C19orf44Q9H6X5 657 aa6.91□□□□□ -1.3
SMNDC1-205ENST00000477763 CYP26B1Q9NR63 512 aa6.91□□□□□ -1.3
SMNDC1-205ENST00000477763 CDK11AQ9UQ88 783 aaPredicted RBP6.91□□□□□ -1.3
SMNDC1-205ENST00000477763 C2orf71A6NGG8 1288 aa6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 STXBP3O00186 592 aa6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 PSPNO60542 156 aa6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 KCNH1O95259 989 aa6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 TBC1D8O95759 1140 aa6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 ITGAVP06756 1048 aa6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 HSF5Q4G112 596 aaPredicted RBP6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 LCE1DQ5T752 114 aa6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 GTF2IRD2BQ6EKJ0 949 aa6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 GTF2IRD2Q86UP8 949 aa6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 PPP1R14AQ96A00 147 aa6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 SGSM3Q96HU1 749 aa6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 DEPDC7Q96QD5 511 aa6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 RNF32Q9H0A6 362 aa6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 NKX2-4Q9H2Z4 354 aa6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 CRTAC1Q9NQ79 661 aa6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 LRP2BPQ9P2M1 347 aa6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 GPR160Q9UJ42 338 aa6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 YBX2Q9Y2T7 364 aaKnown RBP6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 TAF6LQ9Y6J9 622 aa6.9□□□□□ -1.3
SMNDC1-205ENST00000477763 TRBV23OR9-2A0A075B6M9 112 aa6.89□□□□□ -1.31
SMNDC1-205ENST00000477763 IQCA1LA6NCM1 817 aa6.89□□□□□ -1.31
SMNDC1-205ENST00000477763 SEPHS1P49903 392 aa6.89□□□□□ -1.31
SMNDC1-205ENST00000477763 DPY19L1Q2PZI1 675 aa6.89□□□□□ -1.31
SMNDC1-205ENST00000477763 KSR1Q8IVT5 923 aa6.89□□□□□ -1.31
SMNDC1-205ENST00000477763 COPS5Q92905 334 aa6.89□□□□□ -1.31
SMNDC1-205ENST00000477763 CCDC140Q96MF4 163 aa6.89□□□□□ -1.31
SMNDC1-205ENST00000477763 SLC6A17Q9H1V8 727 aa6.89□□□□□ -1.31
SMNDC1-205ENST00000477763 ACSL6Q9UKU0 697 aa6.89□□□□□ -1.31
SMNDC1-205ENST00000477763 LOC105371045A0A1W2PR82 267 aa6.88□□□□□ -1.31
SMNDC1-205ENST00000477763 PDPK1O15530 556 aa6.88□□□□□ -1.31
SMNDC1-205ENST00000477763 CAPNS1P04632 268 aa6.88□□□□□ -1.31
SMNDC1-205ENST00000477763 SCG5P05408 212 aa6.88□□□□□ -1.31
SMNDC1-205ENST00000477763 HOXC12P31275 282 aa6.88□□□□□ -1.31
SMNDC1-205ENST00000477763 CORO7P57737 925 aa6.88□□□□□ -1.31
SMNDC1-205ENST00000477763 IFRD2Q12894 506 aaPredicted RBP6.88□□□□□ -1.31
SMNDC1-205ENST00000477763 RASGRF1Q13972 1273 aa6.88□□□□□ -1.31
SMNDC1-205ENST00000477763 IRF2BP1Q8IU81 584 aa6.88□□□□□ -1.31
SMNDC1-205ENST00000477763 JMJD8Q96S16 334 aa6.88□□□□□ -1.31
SMNDC1-205ENST00000477763 SNTG2Q9NY99 539 aa6.88□□□□□ -1.31
SMNDC1-205ENST00000477763 PNLIPP16233 465 aa6.87□□□□□ -1.31
SMNDC1-205ENST00000477763 LAPTM5Q13571 262 aa6.87□□□□□ -1.31
SMNDC1-205ENST00000477763 MPZL3Q6UWV2 235 aa6.87□□□□□ -1.31
SMNDC1-205ENST00000477763 JAMLQ86YT9 394 aa6.87□□□□□ -1.31
SMNDC1-205ENST00000477763 NLGN2Q8NFZ4 835 aa6.87□□□□□ -1.31
SMNDC1-205ENST00000477763 BTN2A2Q8WVV5 523 aa6.87□□□□□ -1.31
SMNDC1-205ENST00000477763 LIN37Q96GY3 246 aaPredicted RBP6.87□□□□□ -1.31
SMNDC1-205ENST00000477763 INTS4Q96HW7 963 aaKnown RBP6.87□□□□□ -1.31
SMNDC1-205ENST00000477763 PLCD4Q9BRC7 762 aa6.87□□□□□ -1.31
SMNDC1-205ENST00000477763 PIF1Q9H611 641 aa6.87□□□□□ -1.31
SMNDC1-205ENST00000477763 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.87□□□□□ -1.31
SMNDC1-205ENST00000477763 A0A1W2PQU0 124 aa6.86□□□□□ -1.31
SMNDC1-205ENST00000477763 TBX1O43435 398 aa6.86□□□□□ -1.31
SMNDC1-205ENST00000477763 EFEMP2O95967 443 aa6.86□□□□□ -1.31
SMNDC1-205ENST00000477763 CPP00450 1065 aa6.86□□□□□ -1.31
SMNDC1-205ENST00000477763 PAMP19021 973 aa6.86□□□□□ -1.31
SMNDC1-205ENST00000477763 L1CAMP32004 1257 aa6.86□□□□□ -1.31
SMNDC1-205ENST00000477763 JAG1P78504 1218 aa6.86□□□□□ -1.31
SMNDC1-205ENST00000477763 SCRN1Q12765 414 aa6.86□□□□□ -1.31
SMNDC1-205ENST00000477763 POU5F2Q8N7G0 328 aa6.86□□□□□ -1.31
SMNDC1-205ENST00000477763 LGR4Q9BXB1 951 aa6.86□□□□□ -1.31
SMNDC1-205ENST00000477763 KRTAP4-7Q9BYR0 210 aa6.86□□□□□ -1.31
SMNDC1-205ENST00000477763 TMA7Q9Y2S6 64 aaKnown RBP6.86□□□□□ -1.31
SMNDC1-205ENST00000477763 NPHP3-ACAD11A0A0J9YXS1 232 aa6.85□□□□□ -1.31
SMNDC1-205ENST00000477763 FAM221BA6H8Z2 402 aa6.85□□□□□ -1.31
SMNDC1-205ENST00000477763 LRRC10BA6NIK2 292 aa6.85□□□□□ -1.31
SMNDC1-205ENST00000477763 C8AP07357 584 aa6.85□□□□□ -1.31
SMNDC1-205ENST00000477763 ARL4AP40617 200 aa6.85□□□□□ -1.31
SMNDC1-205ENST00000477763 PPP2R2AP63151 447 aa6.85□□□□□ -1.31
SMNDC1-205ENST00000477763 HSP90AA2PQ14568 343 aaPredicted RBP6.85□□□□□ -1.31
SMNDC1-205ENST00000477763 RASA3Q14644 834 aa6.85□□□□□ -1.31
SMNDC1-205ENST00000477763 MTERF2Q49AM1 385 aa6.85□□□□□ -1.31
SMNDC1-205ENST00000477763 LRRC47Q8N1G4 583 aaKnown RBP6.85□□□□□ -1.31
SMNDC1-205ENST00000477763 NPLOC4Q8TAT6 608 aa6.85□□□□□ -1.31
SMNDC1-205ENST00000477763 MMP19Q99542 508 aa6.85□□□□□ -1.31
SMNDC1-205ENST00000477763 IMPACTQ9P2X3 320 aa6.85□□□□□ -1.31
SMNDC1-205ENST00000477763 TLDC2A0PJX2 215 aa6.84□□□□□ -1.31
SMNDC1-205ENST00000477763 THBDP07204 575 aa6.84□□□□□ -1.31
SMNDC1-205ENST00000477763 PRKCAP17252 672 aa6.84□□□□□ -1.31
SMNDC1-205ENST00000477763 GFRA1P56159 465 aa6.84□□□□□ -1.31
SMNDC1-205ENST00000477763 ERVFRD-1P60508 538 aa6.84□□□□□ -1.31
SMNDC1-205ENST00000477763 CYP4F3Q08477 520 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms