RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 GSDMAQ96QA5 445 aa9.01□□□□□ -0.97
VMA21-203ENST00000477649 CCSER1Q9C0I3 900 aa9.01□□□□□ -0.97
VMA21-203ENST00000477649 JMJD4Q9H9V9 463 aa9.01□□□□□ -0.97
VMA21-203ENST00000477649 GOPCQ9HD26 462 aa9.01□□□□□ -0.97
VMA21-203ENST00000477649 RMND1Q9NWS8 449 aa9.01□□□□□ -0.97
VMA21-203ENST00000477649 STK24Q9Y6E0 443 aa9.01□□□□□ -0.97
VMA21-203ENST00000477649 F5H6K3 240 aa9□□□□□ -0.97
VMA21-203ENST00000477649 ACTN4O43707 911 aaKnown RBP9□□□□□ -0.97
VMA21-203ENST00000477649 NEMFO60524 1076 aa9□□□□□ -0.97
VMA21-203ENST00000477649 FOSP01100 380 aaPredicted RBP9□□□□□ -0.97
VMA21-203ENST00000477649 ASNSP08243 561 aa9□□□□□ -0.97
VMA21-203ENST00000477649 MCM7P33993 719 aa9□□□□□ -0.97
VMA21-203ENST00000477649 SARSP49591 514 aaKnown RBP9□□□□□ -0.97
VMA21-203ENST00000477649 MDM2Q00987 491 aaPredicted RBP9□□□□□ -0.97
VMA21-203ENST00000477649 ATP2B2Q01814 1243 aa9□□□□□ -0.97
VMA21-203ENST00000477649 KLRC3Q07444 240 aa9□□□□□ -0.97
VMA21-203ENST00000477649 LONRF3Q496Y0 759 aa9□□□□□ -0.97
VMA21-203ENST00000477649 EARS2Q5JPH6 523 aaKnown RBP9□□□□□ -0.97
VMA21-203ENST00000477649 PPP4R3AQ6IN85 833 aa9□□□□□ -0.97
VMA21-203ENST00000477649 TYW1BQ6NUM6 668 aa9□□□□□ -0.97
VMA21-203ENST00000477649 MOXD1Q6UVY6 613 aa9□□□□□ -0.97
VMA21-203ENST00000477649 SH3RF1Q7Z6J0 888 aa9□□□□□ -0.97
VMA21-203ENST00000477649 LUZP1Q86V48 1076 aa9□□□□□ -0.97
VMA21-203ENST00000477649 HOMER1Q86YM7 354 aa9□□□□□ -0.97
VMA21-203ENST00000477649 PLCD3Q8N3E9 789 aa9□□□□□ -0.97
VMA21-203ENST00000477649 C4orf32Q8N8J7 132 aa9□□□□□ -0.97
VMA21-203ENST00000477649 CHURC1Q8WUH1 139 aa9□□□□□ -0.97
VMA21-203ENST00000477649 AMNQ9BXJ7 453 aa9□□□□□ -0.97
VMA21-203ENST00000477649 UBA5Q9GZZ9 404 aa9□□□□□ -0.97
VMA21-203ENST00000477649 GPCPD1Q9NPB8 672 aa9□□□□□ -0.97
VMA21-203ENST00000477649 MYOZ2Q9NPC6 264 aa9□□□□□ -0.97
VMA21-203ENST00000477649 ZKSCAN5Q9Y2L8 839 aa9□□□□□ -0.97
VMA21-203ENST00000477649 TMX2Q9Y320 296 aa9□□□□□ -0.97
VMA21-203ENST00000477649 VWA3AA6NCI4 1184 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 FZD9O00144 591 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 CBFA2T2O43439 604 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 GH2P01242 217 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 OR52Z1P0C646 297 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 BMP3P12645 472 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 ERCC5P28715 1186 aaPredicted RBP8.99□□□□□ -0.97
VMA21-203ENST00000477649 CLCN1P35523 988 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 UBA7P41226 1012 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 PPP1R2P41236 205 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 CLK2P49760 499 aaKnown RBP8.99□□□□□ -0.97
VMA21-203ENST00000477649 USP11P51784 963 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 CACNB3P54284 484 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 MYL5Q02045 173 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 PDIA5Q14554 519 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 SEPT2Q15019 361 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 TMEM266Q2M3C6 531 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 FAM160B2Q86V87 743 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 PLA2G4DQ86XP0 818 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 KCTD17Q8N5Z5 321 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 PIBF1Q8WXW3 757 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 SYMPKQ92797 1274 aaKnown RBP8.99□□□□□ -0.97
VMA21-203ENST00000477649 CCDC47Q96A33 483 aaKnown RBP8.99□□□□□ -0.97
VMA21-203ENST00000477649 TRIM5Q9C035 493 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 LRRC27Q9C0I9 530 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 PSTPIP2Q9H939 334 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 VAT1LQ9HCJ6 419 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 MTMR7Q9Y216 660 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 PCDHA5Q9Y5H7 936 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 MYH8P13535 1937 aa8.99□□□□□ -0.97
VMA21-203ENST00000477649 FRMPD2Q68DX3 1309 aaPredicted RBP8.99□□□□□ -0.97
VMA21-203ENST00000477649 TCP10L2B9ZVM9 353 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 NFKBIEO00221 500 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 WNT10BO00744 389 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 GTPBP6O43824 516 aaPredicted RBP8.98□□□□□ -0.97
VMA21-203ENST00000477649 ZNF500O60304 480 aaPredicted RBP8.98□□□□□ -0.97
VMA21-203ENST00000477649 NDUFB10O96000 172 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 PYGBP11216 843 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 VEGFAP15692 232 aaPredicted RBP8.98□□□□□ -0.97
VMA21-203ENST00000477649 CAP2P40123 477 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 ZNF75DP51815 510 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 PLCB2Q00722 1185 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 AMPD3Q01432 767 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 MORC3Q14149 939 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 INF2Q27J81 1249 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 DPCR1Q3MIW9 517 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 SYDE2Q5VT97 1194 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 DCAF15Q66K64 600 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 C11orf57Q6ZUT1 292 aaPredicted RBP8.98□□□□□ -0.97
VMA21-203ENST00000477649 SIAH1Q8IUQ4 282 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 DHX40Q8IX18 779 aaKnown RBP8.98□□□□□ -0.97
VMA21-203ENST00000477649 SAMD3Q8N6K7 520 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 ENOX1Q8TC92 643 aaKnown RBP8.98□□□□□ -0.97
VMA21-203ENST00000477649 TBCKQ8TEA7 893 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 VEZTQ9HBM0 779 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 IMPACTQ9P2X3 320 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 SERTAD1Q9UHV2 236 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 ZBTB21Q9ULJ3 1066 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 PCDHAC2Q9Y5I4 1007 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 PPP2R3BQ9Y5P8 575 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 CNTNAP1P78357 1384 aa8.98□□□□□ -0.97
VMA21-203ENST00000477649 CLRN2A0PK11 232 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 USP17L10C9JJH3 530 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 H7C1D1 291 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 PIK3CDO00329 1044 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 TBX3O15119 743 aa8.97□□□□□ -0.97
VMA21-203ENST00000477649 CCNT1O60563 726 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms