RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 BPIFA3Q9BQP9 254 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 ZMYND12Q9H0C1 365 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 TAOK3Q9H2K8 898 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 DDX4Q9NQI0 724 aaKnown RBP7.62□□□□□ -1.19
LDB3-206ENST00000477489 YDJCA8MPS7 323 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 F8W031 263 aaPredicted RBP7.61□□□□□ -1.19
LDB3-206ENST00000477489 M0R2N6 131 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 ZNF202O95125 648 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 PFKFB1P16118 471 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 PRPHP41219 470 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 TOB1P50616 345 aaPredicted RBP7.61□□□□□ -1.19
LDB3-206ENST00000477489 SCNN1DP51172 638 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 CEBPZQ03701 1054 aaKnown RBP7.61□□□□□ -1.19
LDB3-206ENST00000477489 FSTL1Q12841 308 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 DHX8Q14562 1220 aaKnown RBP7.61□□□□□ -1.19
LDB3-206ENST00000477489 ZRSR1Q15695 479 aaKnown RBP7.61□□□□□ -1.19
LDB3-206ENST00000477489 NPY5RQ15761 445 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 CFAP100Q494V2 611 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 CERKLQ49MI3 558 aaPredicted RBP7.61□□□□□ -1.19
LDB3-206ENST00000477489 TTC38Q5R3I4 469 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 TRIML1Q8N9V2 468 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 FAM151AQ8WW52 585 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 SDF4Q9BRK5 362 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 C6orf50Q9HD87 102 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 GJB4Q9NTQ9 266 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 VPS54Q9P1Q0 977 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 FBXO2Q9UK22 296 aaPredicted RBP7.61□□□□□ -1.19
LDB3-206ENST00000477489 KCNJ14Q9UNX9 436 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 PCDHB3Q9Y5E6 796 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 MRVI1Q9Y6F6 885 aa7.61□□□□□ -1.19
LDB3-206ENST00000477489 CCDC194A0A1B0GVG4 234 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 STXBP3O00186 592 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 DTNBO60941 627 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 AKR1B1P15121 316 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 HOXA7P31268 230 aaPredicted RBP7.6□□□□□ -1.19
LDB3-206ENST00000477489 TNNI2P48788 182 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 NDUFA8P51970 172 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 RBM5P52756 815 aaKnown RBP eCLIP7.6□□□□□ -1.19
LDB3-206ENST00000477489 ATP2C1P98194 919 aaPredicted RBP7.6□□□□□ -1.19
LDB3-206ENST00000477489 ZNF543Q08ER8 600 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 NFIAQ12857 509 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 TNFAIP1Q13829 316 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 DLGAP5Q15398 846 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.6□□□□□ -1.19
LDB3-206ENST00000477489 METTL3Q86U44 580 aaKnown RBP7.6□□□□□ -1.19
LDB3-206ENST00000477489 CEP57L1Q8IYX8 460 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 FAM43AQ8N2R8 423 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 CCDC82Q8N4S0 544 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 JDP2Q8WYK2 163 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 MTMR8Q96EF0 704 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 GMCL1Q96IK5 515 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 GTPBP4Q9BZE4 634 aaKnown RBP7.6□□□□□ -1.19
LDB3-206ENST00000477489 FTOQ9C0B1 505 aaKnown RBP eCLIP7.6□□□□□ -1.19
LDB3-206ENST00000477489 GOLPH3LQ9H4A5 285 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 SH2D4AQ9H788 454 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 CABP5Q9NP86 173 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 CCDC39Q9UFE4 941 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 DACH1Q9UI36 760 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 TUBE1Q9UJT0 475 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 KCNH3Q9ULD8 1083 aa7.6□□□□□ -1.19
LDB3-206ENST00000477489 DICER1Q9UPY3 1922 aaKnown RBP7.59□□□□□ -1.19
LDB3-206ENST00000477489 PNMA6FA0A0J9YX94 578 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 A0A1B0GVL5 298 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 GOLGA6L6A8MZA4 724 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 PSMD14O00487 310 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 SLC26A4O43511 780 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 CYTH3O43739 400 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 PLA2G6O60733 806 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 PPFIA3O75145 1194 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 MYL1P05976 194 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 FECHP22830 423 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 LONP1P36776 959 aaKnown RBP7.59□□□□□ -1.19
LDB3-206ENST00000477489 TXLNAP40222 546 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 ZNF165P49910 485 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 ZNF280AP59817 542 aaPredicted RBP7.59□□□□□ -1.19
LDB3-206ENST00000477489 TPM4P67936 248 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 MAP3K10Q02779 954 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 NR5A1Q13285 461 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 NT5DC1Q5TFE4 455 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 WWC2Q6AWC2 1192 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 CIAPIN1Q6FI81 312 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 SHC4Q6S5L8 630 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 SARM1Q6SZW1 724 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 KRBA2Q6ZNG9 492 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 CMTR1Q8N1G2 835 aaKnown RBP7.59□□□□□ -1.19
LDB3-206ENST00000477489 STAG2Q8N3U4 1231 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 DPF2Q92785 391 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 HOOK2Q96ED9 719 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 ZBED3Q96IU2 234 aaPredicted RBP7.59□□□□□ -1.19
LDB3-206ENST00000477489 AK8Q96MA6 479 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 MXD3Q9BW11 206 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 PANK2Q9BZ23 570 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 MAGEF1Q9HAY2 307 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 PNMA2Q9UL42 364 aa7.59□□□□□ -1.19
LDB3-206ENST00000477489 BAZ2BQ9UIF8 2168 aaKnown RBP7.59□□□□□ -1.2
LDB3-206ENST00000477489 SMTNL1A8MU46 457 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 GOLGA6L19H0YKK7 550 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 UBE2Q2LH0YL09 131 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 IKBKBO14920 756 aa7.58□□□□□ -1.2
LDB3-206ENST00000477489 ZBTB5O15062 677 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms