RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 SLC4A4Q9Y6R1 1079 aa11.75□□□□□ -0.53
COL4A5-204ENST00000477429 NKX3-2P78367 333 aa11.74□□□□□ -0.53
COL4A5-204ENST00000477429 RASGRP2Q7LDG7 609 aa11.74□□□□□ -0.53
COL4A5-204ENST00000477429 ZNF467Q7Z7K2 595 aaPredicted RBP11.74□□□□□ -0.53
COL4A5-204ENST00000477429 MICALL1Q8N3F8 863 aa11.74□□□□□ -0.53
COL4A5-204ENST00000477429 TMEM199Q8N511 208 aa11.74□□□□□ -0.53
COL4A5-204ENST00000477429 MSL3Q8N5Y2 521 aaKnown RBP11.74□□□□□ -0.53
COL4A5-204ENST00000477429 KIFC2Q96AC6 838 aa11.74□□□□□ -0.53
COL4A5-204ENST00000477429 SCLYQ96I15 445 aa11.74□□□□□ -0.53
COL4A5-204ENST00000477429 NOC4LQ9BVI4 516 aaKnown RBP11.74□□□□□ -0.53
COL4A5-204ENST00000477429 GOPCQ9HD26 462 aa11.74□□□□□ -0.53
COL4A5-204ENST00000477429 PRRC2BQ5JSZ5 2229 aaKnown RBP11.74□□□□□ -0.53
COL4A5-204ENST00000477429 GSG1L2A8MUP6 293 aa11.73□□□□□ -0.53
COL4A5-204ENST00000477429 PI4K2BG5E9Z4 385 aa11.73□□□□□ -0.53
COL4A5-204ENST00000477429 ATP2A1O14983 1001 aa11.73□□□□□ -0.53
COL4A5-204ENST00000477429 ZNF536O15090 1300 aa11.73□□□□□ -0.53
COL4A5-204ENST00000477429 B4GALT4O60513 344 aa11.73□□□□□ -0.53
COL4A5-204ENST00000477429 PRDM1O75626 825 aa11.73□□□□□ -0.53
COL4A5-204ENST00000477429 RGS20O76081 388 aa11.73□□□□□ -0.53
COL4A5-204ENST00000477429 FGBP02675 491 aa11.73□□□□□ -0.53
COL4A5-204ENST00000477429 SMPD1P17405 629 aa11.73□□□□□ -0.53
COL4A5-204ENST00000477429 PTPRZ1P23471 2315 aaPredicted RBP11.73□□□□□ -0.53
COL4A5-204ENST00000477429 SNAP25P60880 206 aa11.73□□□□□ -0.53
COL4A5-204ENST00000477429 COL9A2Q14055 689 aaPredicted RBP11.73□□□□□ -0.53
COL4A5-204ENST00000477429 TTLL4Q14679 1199 aa11.73□□□□□ -0.53
COL4A5-204ENST00000477429 PSRC1Q6PGN9 363 aaPredicted RBP11.73□□□□□ -0.53
COL4A5-204ENST00000477429 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.73□□□□□ -0.53
COL4A5-204ENST00000477429 ERC1Q8IUD2 1116 aa11.73□□□□□ -0.53
COL4A5-204ENST00000477429 FTSJ3Q8IY81 847 aaKnown RBP11.73□□□□□ -0.53
COL4A5-204ENST00000477429 AGBL1Q96MI9 1066 aa11.73□□□□□ -0.53
COL4A5-204ENST00000477429 HIPK3Q9H422 1215 aa11.73□□□□□ -0.53
COL4A5-204ENST00000477429 CERS4Q9HA82 394 aa11.73□□□□□ -0.53
COL4A5-204ENST00000477429 SLC38A10Q9HBR0 1119 aa11.73□□□□□ -0.53
COL4A5-204ENST00000477429 EPB41L4AQ9HCS5 686 aaPredicted RBP11.73□□□□□ -0.53
COL4A5-204ENST00000477429 HOMER2Q9NSB8 354 aa11.73□□□□□ -0.53
COL4A5-204ENST00000477429 CLIP2Q9UDT6 1046 aa11.73□□□□□ -0.53
COL4A5-204ENST00000477429 GNEQ9Y223 722 aaKnown RBP11.73□□□□□ -0.53
COL4A5-204ENST00000477429 LRRC37A2A6NM11 1700 aa11.72□□□□□ -0.53
COL4A5-204ENST00000477429 ATP5JP18859 108 aa11.72□□□□□ -0.53
COL4A5-204ENST00000477429 RAB30Q15771 203 aa11.72□□□□□ -0.53
COL4A5-204ENST00000477429 LRRC47Q8N1G4 583 aaKnown RBP11.72□□□□□ -0.53
COL4A5-204ENST00000477429 ANKRD35Q8N283 1001 aa11.72□□□□□ -0.53
COL4A5-204ENST00000477429 FAM133AQ8N9E0 248 aa11.72□□□□□ -0.53
COL4A5-204ENST00000477429 PCSK9Q8NBP7 692 aaKnown RBP11.72□□□□□ -0.53
COL4A5-204ENST00000477429 UIMC1Q96RL1 719 aa11.72□□□□□ -0.53
COL4A5-204ENST00000477429 STRBPQ96SI9 672 aaKnown RBP11.72□□□□□ -0.53
COL4A5-204ENST00000477429 HAUS7Q99871 368 aa11.72□□□□□ -0.53
COL4A5-204ENST00000477429 ABHD16BQ9H3Z7 469 aa11.72□□□□□ -0.53
COL4A5-204ENST00000477429 SLC28A3Q9HAS3 691 aa11.72□□□□□ -0.53
COL4A5-204ENST00000477429 CD320Q9NPF0 282 aa11.72□□□□□ -0.53
COL4A5-204ENST00000477429 A1CFQ9NQ94 594 aaKnown RBP11.72□□□□□ -0.53
COL4A5-204ENST00000477429 NYAP2Q9P242 653 aa11.72□□□□□ -0.53
COL4A5-204ENST00000477429 MSRAQ9UJ68 235 aa11.72□□□□□ -0.53
COL4A5-204ENST00000477429 NCOR2Q9Y618 2525 aa11.72□□□□□ -0.53
COL4A5-204ENST00000477429 MROH7Q68CQ1 1323 aa11.71□□□□□ -0.53
COL4A5-204ENST00000477429 IFIT2P09913 472 aaKnown RBP11.71□□□□□ -0.53
COL4A5-204ENST00000477429 CYP2C9P11712 490 aa11.71□□□□□ -0.53
COL4A5-204ENST00000477429 COPB2P35606 906 aa11.71□□□□□ -0.53
COL4A5-204ENST00000477429 TNFAIP2Q03169 654 aa11.71□□□□□ -0.53
COL4A5-204ENST00000477429 ITGA7Q13683 1181 aa11.71□□□□□ -0.53
COL4A5-204ENST00000477429 UBE3CQ15386 1083 aa11.71□□□□□ -0.53
COL4A5-204ENST00000477429 TAPT1Q6NXT6 567 aa11.71□□□□□ -0.53
COL4A5-204ENST00000477429 EEPD1Q7L9B9 569 aa11.71□□□□□ -0.53
COL4A5-204ENST00000477429 CLASRPQ8N2M8 674 aaKnown RBP11.71□□□□□ -0.53
COL4A5-204ENST00000477429 PRPF38AQ8NAV1 312 aaKnown RBP11.71□□□□□ -0.53
COL4A5-204ENST00000477429 OSBP2Q969R2 916 aa11.71□□□□□ -0.53
COL4A5-204ENST00000477429 CEP95Q96GE4 821 aa11.71□□□□□ -0.53
COL4A5-204ENST00000477429 MTCH2Q9Y6C9 303 aa11.71□□□□□ -0.53
COL4A5-204ENST00000477429 FASNP49327 2511 aaKnown RBP11.7□□□□□ -0.54
COL4A5-204ENST00000477429 DYNC1LI2O43237 492 aaPredicted RBP11.7□□□□□ -0.54
COL4A5-204ENST00000477429 SMARCA5O60264 1052 aaPredicted RBP11.7□□□□□ -0.54
COL4A5-204ENST00000477429 CA3P07451 260 aa11.7□□□□□ -0.54
COL4A5-204ENST00000477429 SBK1Q52WX2 424 aa11.7□□□□□ -0.54
COL4A5-204ENST00000477429 MUM1L1Q5H9M0 696 aa11.7□□□□□ -0.54
COL4A5-204ENST00000477429 PPP2R2DQ66LE6 453 aa11.7□□□□□ -0.54
COL4A5-204ENST00000477429 TLK2Q86UE8 772 aa11.7□□□□□ -0.54
COL4A5-204ENST00000477429 FBXO16Q8IX29 292 aaPredicted RBP11.7□□□□□ -0.54
COL4A5-204ENST00000477429 KIF1BPQ96EK5 621 aa11.7□□□□□ -0.54
COL4A5-204ENST00000477429 TRMT13Q9NUP7 481 aaKnown RBP11.7□□□□□ -0.54
COL4A5-204ENST00000477429 LCTP09848 1927 aa11.7□□□□□ -0.54
COL4A5-204ENST00000477429 SCN5AQ14524 2016 aa11.69□□□□□ -0.54
COL4A5-204ENST00000477429 MINDY4BA8MYZ0 360 aa11.69□□□□□ -0.54
COL4A5-204ENST00000477429 M0R2C6 588 aa11.69□□□□□ -0.54
COL4A5-204ENST00000477429 TLR3O15455 904 aaKnown RBP11.69□□□□□ -0.54
COL4A5-204ENST00000477429 ABCB7O75027 752 aa11.69□□□□□ -0.54
COL4A5-204ENST00000477429 ZBED4O75132 1171 aa11.69□□□□□ -0.54
COL4A5-204ENST00000477429 FSCN1Q16658 493 aaKnown RBP11.69□□□□□ -0.54
COL4A5-204ENST00000477429 TSHZ3Q63HK5 1081 aa11.69□□□□□ -0.54
COL4A5-204ENST00000477429 NOL8Q76FK4 1167 aaKnown RBP11.69□□□□□ -0.54
COL4A5-204ENST00000477429 TMCO2Q7Z6W1 182 aaPredicted RBP11.69□□□□□ -0.54
COL4A5-204ENST00000477429 MKL1Q969V6 931 aa11.69□□□□□ -0.54
COL4A5-204ENST00000477429 INCENPQ9NQS7 918 aa11.69□□□□□ -0.54
COL4A5-204ENST00000477429 MTMR4Q9NYA4 1195 aa11.69□□□□□ -0.54
COL4A5-204ENST00000477429 ZBBXA8MT70 800 aa11.68□□□□□ -0.54
COL4A5-204ENST00000477429 TMEM232C9JQI7 657 aa11.68□□□□□ -0.54
COL4A5-204ENST00000477429 CCER2I3L3R5 266 aa11.68□□□□□ -0.54
COL4A5-204ENST00000477429 TLL1O43897 1013 aa11.68□□□□□ -0.54
COL4A5-204ENST00000477429 ATP2A2P16615 1042 aaKnown RBP11.68□□□□□ -0.54
COL4A5-204ENST00000477429 TCTN1Q2MV58 587 aa11.68□□□□□ -0.54
COL4A5-204ENST00000477429 CCDC174Q6PII3 467 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms