RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 SEMA3FQ13275 785 aa17■□□□□ 0.31
CLSTN1-205ENST00000477264 GLE1Q53GS7 698 aaKnown RBP17■□□□□ 0.31
CLSTN1-205ENST00000477264 CCDC155Q8N6L0 562 aa17■□□□□ 0.31
CLSTN1-205ENST00000477264 C3orf20Q8ND61 904 aa17■□□□□ 0.31
CLSTN1-205ENST00000477264 NLRP3Q96P20 1036 aa17■□□□□ 0.31
CLSTN1-205ENST00000477264 SNX12Q9UMY4 172 aa17■□□□□ 0.31
CLSTN1-205ENST00000477264 DOCK2Q92608 1830 aa17■□□□□ 0.31
CLSTN1-205ENST00000477264 A0A087X0B3 334 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 TTC26A0AVF1 554 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 SRGAP2O75044 1071 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 GYS1P13807 737 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 XBP1P17861 261 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 CDC25AP30304 524 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 TDO2P48775 406 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 CDK17Q00537 523 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 NFIXQ14938 502 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 TTMPQ5BVD1 217 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 ZNF658Q5TYW1 1059 aaPredicted RBP16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 RRAGBQ5VZM2 374 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 USP49Q70CQ1 688 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 MB21D1Q8N884 522 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 ZKSCAN4Q969J2 545 aaPredicted RBP16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 AIDAQ96BJ3 306 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 GDAP1L1Q96MZ0 367 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 JPH2Q9BR39 696 aaPredicted RBP16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 SAMM50Q9Y512 469 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 CASZ1Q86V15 1759 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 GOLGA6L7A0A1B0GV03 622 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 ZMYND10O75800 440 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 TCP1P17987 556 aaKnown RBP16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 NF2P35240 595 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 ZAP70P43403 619 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 ACTN3Q08043 901 aaPredicted RBP16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 UBE3CQ15386 1083 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 SF3B3Q15393 1217 aaKnown RBP16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 WLSQ5T9L3 541 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 CD302Q8IX05 232 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 MAGEC3Q8TD91 643 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 NELFBQ8WX92 580 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 SYMPKQ92797 1274 aaKnown RBP16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 KRT23Q9C075 422 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 EHD4Q9H223 541 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 KCNJ14Q9UNX9 436 aa16.99■□□□□ 0.31
CLSTN1-205ENST00000477264 MROH5Q6ZUA9 1318 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 PDE2AO00408 941 aaPredicted RBP16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 IFIT3O14879 490 aaKnown RBP16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 SATB1Q01826 763 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 NAA35Q5VZE5 725 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 CEP120Q8N960 986 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 NOC3LQ8WTT2 800 aaKnown RBP16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 ZNF512BQ96KM6 892 aaPredicted RBP16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 JADE2Q9NQC1 790 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 STIM2Q9P246 746 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 MYO1FO00160 1098 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 TACC1O75410 805 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 LSP1P33241 339 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 VAV2P52735 878 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 KIF5AQ12840 1032 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 PDCLQ13371 301 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 PPP2R5BQ15173 497 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 SMYD4Q8IYR2 804 aaPredicted RBP16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 MREGQ8N565 214 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 CNBD1Q8NA66 436 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 FLAD1Q8NFF5 587 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 THAP9Q9H5L6 903 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 SENP2Q9HC62 589 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 KLC4Q9NSK0 619 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 ARAP2Q8WZ64 1704 aa16.98■□□□□ 0.31
CLSTN1-205ENST00000477264 RIC1Q4ADV7 1423 aa16.97■□□□□ 0.31
CLSTN1-205ENST00000477264 LRP5O75197 1615 aa16.97■□□□□ 0.31
CLSTN1-205ENST00000477264 USO1O60763 962 aaKnown RBP16.97■□□□□ 0.31
CLSTN1-205ENST00000477264 PDE8BO95263 885 aa16.97■□□□□ 0.31
CLSTN1-205ENST00000477264 DNM2P50570 870 aa16.97■□□□□ 0.31
CLSTN1-205ENST00000477264 CDR1P51861 262 aa16.97■□□□□ 0.31
CLSTN1-205ENST00000477264 WDR59Q6PJI9 974 aa16.97■□□□□ 0.31
CLSTN1-205ENST00000477264 TAX1BP1Q86VP1 789 aa16.97■□□□□ 0.31
CLSTN1-205ENST00000477264 TMTC2Q8N394 836 aa16.97■□□□□ 0.31
CLSTN1-205ENST00000477264 AKT1S1Q96B36 256 aa16.97■□□□□ 0.31
CLSTN1-205ENST00000477264 VEZTQ9HBM0 779 aa16.97■□□□□ 0.31
CLSTN1-205ENST00000477264 HYOU1Q9Y4L1 999 aa16.97■□□□□ 0.31
CLSTN1-205ENST00000477264 XDHP47989 1333 aa16.97■□□□□ 0.31
CLSTN1-205ENST00000477264 RASSF9O75901 435 aa16.96■□□□□ 0.31
CLSTN1-205ENST00000477264 PARP1P09874 1014 aaKnown RBP16.96■□□□□ 0.31
CLSTN1-205ENST00000477264 ERCC3P19447 782 aa16.96■□□□□ 0.31
CLSTN1-205ENST00000477264 CALRP27797 417 aaKnown RBP16.96■□□□□ 0.31
CLSTN1-205ENST00000477264 MRPL12P52815 198 aaKnown RBP16.96■□□□□ 0.31
CLSTN1-205ENST00000477264 NR5A1Q13285 461 aa16.96■□□□□ 0.31
CLSTN1-205ENST00000477264 CCDC40Q4G0X9 1142 aa16.96■□□□□ 0.31
CLSTN1-205ENST00000477264 CREG2Q8IUH2 290 aa16.96■□□□□ 0.31
CLSTN1-205ENST00000477264 CRACR2BQ8N4Y2 399 aaPredicted RBP16.96■□□□□ 0.31
CLSTN1-205ENST00000477264 ZNF473Q8WTR7 871 aaKnown RBP16.96■□□□□ 0.31
CLSTN1-205ENST00000477264 RRP36Q96EU6 259 aaKnown RBP16.96■□□□□ 0.31
CLSTN1-205ENST00000477264 RNF26Q9BY78 433 aaPredicted RBP16.96■□□□□ 0.31
CLSTN1-205ENST00000477264 PPP1R37O75864 691 aa16.96■□□□□ 0.31
CLSTN1-205ENST00000477264 GUCY1A2P33402 732 aa16.96■□□□□ 0.31
CLSTN1-205ENST00000477264 PTGISQ16647 500 aa16.96■□□□□ 0.31
CLSTN1-205ENST00000477264 ZNF507Q8TCN5 953 aa16.96■□□□□ 0.31
CLSTN1-205ENST00000477264 EPSTI1Q96J88 318 aa16.96■□□□□ 0.31
CLSTN1-205ENST00000477264 MYL10Q9BUA6 226 aa16.96■□□□□ 0.31
CLSTN1-205ENST00000477264 CABP5Q9NP86 173 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms