RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 PIH1D3Q9NQM4 214 aaKnown RBP8.75□□□□□ -1.01
BRCA1-214ENST00000477152 RBPJLQ9UBG7 517 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 MPHOSPH10O00566 681 aaKnown RBP8.74□□□□□ -1.01
BRCA1-214ENST00000477152 USP4Q13107 963 aa8.74□□□□□ -1.01
BRCA1-214ENST00000477152 RRP1BQ14684 758 aaKnown RBP8.74□□□□□ -1.01
BRCA1-214ENST00000477152 ZSCAN25Q6NSZ9 544 aa8.74□□□□□ -1.01
BRCA1-214ENST00000477152 LBX2Q6XYB7 198 aa8.74□□□□□ -1.01
BRCA1-214ENST00000477152 MB21D1Q8N884 522 aa8.74□□□□□ -1.01
BRCA1-214ENST00000477152 EAF2Q96CJ1 260 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-214ENST00000477152 LBHD1Q9BQE6 289 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-214ENST00000477152 PRO3102Q9H379 93 aa8.74□□□□□ -1.01
BRCA1-214ENST00000477152 STAP2Q9UGK3 403 aa8.74□□□□□ -1.01
BRCA1-214ENST00000477152 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-214ENST00000477152 PLXNB2O15031 1838 aa8.74□□□□□ -1.01
BRCA1-214ENST00000477152 NAV1Q8NEY1 1877 aa8.74□□□□□ -1.01
BRCA1-214ENST00000477152 NR3C2P08235 984 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 ATP1A2P50993 1020 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 COG2Q14746 738 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 ZYXQ15942 572 aaKnown RBP8.73□□□□□ -1.01
BRCA1-214ENST00000477152 SLC9C2Q5TAH2 1124 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 CEP85Q6P2H3 762 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 ADGRA1Q86SQ6 560 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 DPP9Q86TI2 863 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 SIX5Q8N196 739 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 ARRDC4Q8NCT1 418 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 LPAR1Q92633 364 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 CDK15Q96Q40 435 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 MCM9Q9NXL9 1143 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 CDV3Q9UKY7 258 aaKnown RBP8.73□□□□□ -1.01
BRCA1-214ENST00000477152 DDX19BQ9UMR2 479 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 MAP4K5Q9Y4K4 846 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 PRMT3O60678 531 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 CNGA1P29973 690 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 CACNB2Q08289 660 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-214ENST00000477152 TMEM179Q6ZVK1 233 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 TDHQ8IZJ6 230 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 PRIMPOLQ96LW4 560 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 CCDC17Q96LX7 622 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 GDF15Q99988 308 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 UBE2OQ9C0C9 1292 aaKnown RBP8.73□□□□□ -1.01
BRCA1-214ENST00000477152 DNAJC18Q9H819 358 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 ATP8A2Q9NTI2 1148 aa8.73□□□□□ -1.01
BRCA1-214ENST00000477152 ALPK3Q96L96 1907 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 VCAM1P19320 739 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 COPB2P35606 906 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 SLC17A8Q8NDX2 589 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 SHCBP1Q8NEM2 672 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 RHPN1Q8TCX5 695 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 DIS3LQ8TF46 1054 aaKnown RBP8.72□□□□□ -1.01
BRCA1-214ENST00000477152 USP6NLQ92738 828 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 TANGO6Q9C0B7 1094 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 MROH8Q9H579 483 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 RPAP3Q9H6T3 665 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-214ENST00000477152 TXNRD2Q9NNW7 524 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 ZMYND8Q9ULU4 1186 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-214ENST00000477152 TNNQ9UQP3 1299 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 EXOC6BQ9Y2D4 811 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 CEP290O15078 2479 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 HTTP42858 3142 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 KBTBD13C9JR72 458 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 HOXC6P09630 235 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 KCNA1Q09470 495 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 LRRFIP1Q32MZ4 808 aaKnown RBP8.72□□□□□ -1.01
BRCA1-214ENST00000477152 LRIT3Q3SXY7 679 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.72□□□□□ -1.01
BRCA1-214ENST00000477152 TSEN2Q8NCE0 465 aaKnown RBP8.72□□□□□ -1.01
BRCA1-214ENST00000477152 DNAJC2Q99543 621 aaKnown RBP8.72□□□□□ -1.01
BRCA1-214ENST00000477152 PORCNQ9H237 461 aa8.72□□□□□ -1.01
BRCA1-214ENST00000477152 DDX20Q9UHI6 824 aaKnown RBP8.72□□□□□ -1.01
BRCA1-214ENST00000477152 ZBED9Q6R2W3 1325 aa8.71□□□□□ -1.02
BRCA1-214ENST00000477152 DNM1LO00429 736 aa8.71□□□□□ -1.02
BRCA1-214ENST00000477152 SLC25A27O95847 323 aa8.71□□□□□ -1.02
BRCA1-214ENST00000477152 PDE6AP16499 860 aa8.71□□□□□ -1.02
BRCA1-214ENST00000477152 FOXC1Q12948 553 aa8.71□□□□□ -1.02
BRCA1-214ENST00000477152 GRB14Q14449 540 aa8.71□□□□□ -1.02
BRCA1-214ENST00000477152 OLFML2BQ68BL8 750 aa8.71□□□□□ -1.02
BRCA1-214ENST00000477152 ABRAQ8N0Z2 381 aa8.71□□□□□ -1.02
BRCA1-214ENST00000477152 GPATCH3Q96I76 525 aa8.71□□□□□ -1.02
BRCA1-214ENST00000477152 OSBPL3Q9H4L5 887 aa8.71□□□□□ -1.02
BRCA1-214ENST00000477152 TLR7Q9NYK1 1049 aaKnown RBP8.71□□□□□ -1.02
BRCA1-214ENST00000477152 ZNF532Q9HCE3 1301 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 TRIOBPQ9H2D6 2365 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 GOLIM4O00461 696 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 SHMT1P34896 483 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 MAGEA10P43363 369 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-214ENST00000477152 SEC13P55735 322 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 RIOK1Q9BRS2 568 aaKnown RBP8.7□□□□□ -1.02
BRCA1-214ENST00000477152 ZNF287Q9HBT7 754 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 IL1RAPL2Q9NP60 686 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 PAG1Q9NWQ8 432 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 NRBP1Q9UHY1 535 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 FRMPD3Q5JV73 1810 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 ZNF236Q9UL36 1845 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 MYH7P12883 1935 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 WDR46O15213 610 aaKnown RBP8.7□□□□□ -1.02
BRCA1-214ENST00000477152 ADH1CP00326 375 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 COL6A1P12109 1028 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 FCER1AP12319 257 aa8.7□□□□□ -1.02
BRCA1-214ENST00000477152 CCND3P30281 292 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-214ENST00000477152 PLCD1P51178 756 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms