RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 ST7Q9NRC1 585 aa7.03□□□□□ -1.28
SOX2-OT-207ENST00000476964 MSRB2Q9Y3D2 182 aa7.03□□□□□ -1.28
SOX2-OT-207ENST00000476964 R3HCC1Q9Y3T6 440 aaKnown RBP7.03□□□□□ -1.28
SOX2-OT-207ENST00000476964 STXBP3O00186 592 aa7.02□□□□□ -1.29
SOX2-OT-207ENST00000476964 KCNH1O95259 989 aa7.02□□□□□ -1.29
SOX2-OT-207ENST00000476964 ERVFRD-1P60508 538 aa7.02□□□□□ -1.29
SOX2-OT-207ENST00000476964 MVKQ03426 396 aa7.02□□□□□ -1.29
SOX2-OT-207ENST00000476964 NBPF6Q5VWK0 638 aa7.02□□□□□ -1.29
SOX2-OT-207ENST00000476964 GTF2IRD2BQ6EKJ0 949 aa7.02□□□□□ -1.29
SOX2-OT-207ENST00000476964 GTF2IRD2Q86UP8 949 aa7.02□□□□□ -1.29
SOX2-OT-207ENST00000476964 KRTAP19-1Q8IUB9 90 aa7.02□□□□□ -1.29
SOX2-OT-207ENST00000476964 NAT16Q8N8M0 369 aa7.02□□□□□ -1.29
SOX2-OT-207ENST00000476964 NBPF4Q96M43 638 aa7.02□□□□□ -1.29
SOX2-OT-207ENST00000476964 LGR4Q9BXB1 951 aa7.02□□□□□ -1.29
SOX2-OT-207ENST00000476964 NSUN3Q9H649 340 aaKnown RBP7.02□□□□□ -1.29
SOX2-OT-207ENST00000476964 TAF6LQ9Y6J9 622 aa7.02□□□□□ -1.29
SOX2-OT-207ENST00000476964 KRTAP9-6A0A140TA67 174 aa7.01□□□□□ -1.29
SOX2-OT-207ENST00000476964 HRKO00198 91 aa7.01□□□□□ -1.29
SOX2-OT-207ENST00000476964 TBX1O43435 398 aa7.01□□□□□ -1.29
SOX2-OT-207ENST00000476964 PEX10O60683 326 aa7.01□□□□□ -1.29
SOX2-OT-207ENST00000476964 SCG5P05408 212 aa7.01□□□□□ -1.29
SOX2-OT-207ENST00000476964 PRKCAP17252 672 aa7.01□□□□□ -1.29
SOX2-OT-207ENST00000476964 SEPHS1P49903 392 aa7.01□□□□□ -1.29
SOX2-OT-207ENST00000476964 CORO7P57737 925 aa7.01□□□□□ -1.29
SOX2-OT-207ENST00000476964 LAPTM5Q13571 262 aa7.01□□□□□ -1.29
SOX2-OT-207ENST00000476964 SLC10A6Q3KNW5 377 aa7.01□□□□□ -1.29
SOX2-OT-207ENST00000476964 SV2CQ496J9 727 aa7.01□□□□□ -1.29
SOX2-OT-207ENST00000476964 ZNF227Q86WZ6 799 aa7.01□□□□□ -1.29
SOX2-OT-207ENST00000476964 SIRT2Q8IXJ6 389 aa7.01□□□□□ -1.29
SOX2-OT-207ENST00000476964 DIRC2Q96SL1 478 aa7.01□□□□□ -1.29
SOX2-OT-207ENST00000476964 GOLGA2P5Q9HBQ8 144 aa7.01□□□□□ -1.29
SOX2-OT-207ENST00000476964 IMPACTQ9P2X3 320 aa7.01□□□□□ -1.29
SOX2-OT-207ENST00000476964 KRT1P04264 644 aa7□□□□□ -1.29
SOX2-OT-207ENST00000476964 C8AP07357 584 aa7□□□□□ -1.29
SOX2-OT-207ENST00000476964 MSL3P1P0C860 447 aa7□□□□□ -1.29
SOX2-OT-207ENST00000476964 HOXC12P31275 282 aa7□□□□□ -1.29
SOX2-OT-207ENST00000476964 L1CAMP32004 1257 aa7□□□□□ -1.29
SOX2-OT-207ENST00000476964 YBX1P67809 324 aaKnown RBP7□□□□□ -1.29
SOX2-OT-207ENST00000476964 CYP4F8P98187 520 aa7□□□□□ -1.29
SOX2-OT-207ENST00000476964 ZNF648Q5T619 568 aaPredicted RBP7□□□□□ -1.29
SOX2-OT-207ENST00000476964 CKAP2LQ8IYA6 745 aa7□□□□□ -1.29
SOX2-OT-207ENST00000476964 FBXO15Q8NCQ5 510 aaPredicted RBP7□□□□□ -1.29
SOX2-OT-207ENST00000476964 ST13P5Q8NFI4 369 aaPredicted RBP7□□□□□ -1.29
SOX2-OT-207ENST00000476964 CCDC140Q96MF4 163 aa7□□□□□ -1.29
SOX2-OT-207ENST00000476964 EPB41L4BQ9H329 900 aa7□□□□□ -1.29
SOX2-OT-207ENST00000476964 KCNK12Q9HB15 430 aa7□□□□□ -1.29
SOX2-OT-207ENST00000476964 DCP1AQ9NPI6 582 aaPredicted RBP7□□□□□ -1.29
SOX2-OT-207ENST00000476964 TRBV23OR9-2A0A075B6M9 112 aa6.99□□□□□ -1.29
SOX2-OT-207ENST00000476964 ARNTLO00327 626 aa6.99□□□□□ -1.29
SOX2-OT-207ENST00000476964 PPP1R11O60927 126 aaPredicted RBP6.99□□□□□ -1.29
SOX2-OT-207ENST00000476964 PAMP19021 973 aa6.99□□□□□ -1.29
SOX2-OT-207ENST00000476964 SCRN1Q12765 414 aa6.99□□□□□ -1.29
SOX2-OT-207ENST00000476964 CBX2Q14781 532 aaPredicted RBP6.99□□□□□ -1.29
SOX2-OT-207ENST00000476964 TESK1Q15569 626 aa6.99□□□□□ -1.29
SOX2-OT-207ENST00000476964 NUP43Q8NFH3 380 aa6.99□□□□□ -1.29
SOX2-OT-207ENST00000476964 NPLOC4Q8TAT6 608 aa6.99□□□□□ -1.29
SOX2-OT-207ENST00000476964 ZNF669Q96BR6 464 aaPredicted RBP6.99□□□□□ -1.29
SOX2-OT-207ENST00000476964 SGSM3Q96HU1 749 aa6.99□□□□□ -1.29
SOX2-OT-207ENST00000476964 MMP19Q99542 508 aa6.99□□□□□ -1.29
SOX2-OT-207ENST00000476964 HIRIP3Q9BW71 556 aaPredicted RBP6.99□□□□□ -1.29
SOX2-OT-207ENST00000476964 TNFRSF12AQ9NP84 129 aa6.99□□□□□ -1.29
SOX2-OT-207ENST00000476964 GPRC5CQ9NQ84 441 aa6.99□□□□□ -1.29
SOX2-OT-207ENST00000476964 SHROOM4Q9ULL8 1493 aa6.98□□□□□ -1.29
SOX2-OT-207ENST00000476964 MYOCOSA0A1B0GUC4 107 aa6.98□□□□□ -1.29
SOX2-OT-207ENST00000476964 A0A1W2PQU0 124 aa6.98□□□□□ -1.29
SOX2-OT-207ENST00000476964 OR14I1A6ND48 311 aa6.98□□□□□ -1.29
SOX2-OT-207ENST00000476964 JAMLQ86YT9 394 aa6.98□□□□□ -1.29
SOX2-OT-207ENST00000476964 KREMEN2Q8NCW0 462 aa6.98□□□□□ -1.29
SOX2-OT-207ENST00000476964 FRS2Q8WU20 508 aa6.98□□□□□ -1.29
SOX2-OT-207ENST00000476964 BTN2A2Q8WVV5 523 aa6.98□□□□□ -1.29
SOX2-OT-207ENST00000476964 PPP1R14AQ96A00 147 aa6.98□□□□□ -1.29
SOX2-OT-207ENST00000476964 SLC26A8Q96RN1 970 aa6.98□□□□□ -1.29
SOX2-OT-207ENST00000476964 MCOLN1Q9GZU1 580 aa6.98□□□□□ -1.29
SOX2-OT-207ENST00000476964 CCDC113Q9H0I3 377 aa6.98□□□□□ -1.29
SOX2-OT-207ENST00000476964 PDLIM7Q9NR12 457 aa6.98□□□□□ -1.29
SOX2-OT-207ENST00000476964 LRP2BPQ9P2M1 347 aa6.98□□□□□ -1.29
SOX2-OT-207ENST00000476964 NPHP3-ACAD11A0A0J9YXS1 232 aa6.97□□□□□ -1.29
SOX2-OT-207ENST00000476964 THBDP07204 575 aa6.97□□□□□ -1.29
SOX2-OT-207ENST00000476964 MED14OSP0DP75 135 aa6.97□□□□□ -1.29
SOX2-OT-207ENST00000476964 PLS3P13797 630 aa6.97□□□□□ -1.29
SOX2-OT-207ENST00000476964 GTF2F1P35269 517 aaKnown RBP eCLIP6.97□□□□□ -1.29
SOX2-OT-207ENST00000476964 PDE6BP35913 854 aa6.97□□□□□ -1.29
SOX2-OT-207ENST00000476964 ARL4AP40617 200 aa6.97□□□□□ -1.29
SOX2-OT-207ENST00000476964 SERINC3Q13530 473 aa6.97□□□□□ -1.29
SOX2-OT-207ENST00000476964 SF1Q15637 639 aaKnown RBP6.97□□□□□ -1.29
SOX2-OT-207ENST00000476964 ADGRF1Q5T601 910 aa6.97□□□□□ -1.29
SOX2-OT-207ENST00000476964 KSR1Q8IVT5 923 aa6.97□□□□□ -1.29
SOX2-OT-207ENST00000476964 TRIM55Q9BYV6 548 aa6.97□□□□□ -1.29
SOX2-OT-207ENST00000476964 KLHL14Q9P2G3 628 aa6.97□□□□□ -1.29
SOX2-OT-207ENST00000476964 TEX51A0A1B0GUA7 166 aa6.96□□□□□ -1.3
SOX2-OT-207ENST00000476964 C7orf72A4D263 438 aa6.96□□□□□ -1.3
SOX2-OT-207ENST00000476964 CPP00450 1065 aa6.96□□□□□ -1.3
SOX2-OT-207ENST00000476964 MPOP05164 745 aa6.96□□□□□ -1.3
SOX2-OT-207ENST00000476964 GRIA2P42262 883 aa6.96□□□□□ -1.3
SOX2-OT-207ENST00000476964 GFRA1P56159 465 aa6.96□□□□□ -1.3
SOX2-OT-207ENST00000476964 PPP2R2AP63151 447 aa6.96□□□□□ -1.3
SOX2-OT-207ENST00000476964 SF3A1Q15459 793 aaKnown RBP6.96□□□□□ -1.3
SOX2-OT-207ENST00000476964 MBLAC2Q68D91 279 aa6.96□□□□□ -1.3
SOX2-OT-207ENST00000476964 SYDE1Q6ZW31 735 aaPredicted RBP6.96□□□□□ -1.3
SOX2-OT-207ENST00000476964 CPNE8Q86YQ8 564 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms