RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 RPAINQ86UA6 219 aa7.88□□□□□ -1.15
CLDN4-205ENST00000476494 CLUAP1Q96AJ1 413 aa7.88□□□□□ -1.15
CLDN4-205ENST00000476494 NSUN4Q96CB9 384 aaKnown RBP7.88□□□□□ -1.15
CLDN4-205ENST00000476494 CCDC136Q96JN2 1154 aa7.88□□□□□ -1.15
CLDN4-205ENST00000476494 FGD4Q96M96 766 aa7.88□□□□□ -1.15
CLDN4-205ENST00000476494 RAD9AQ99638 391 aa7.88□□□□□ -1.15
CLDN4-205ENST00000476494 ALDH8A1Q9H2A2 487 aaPredicted RBP7.88□□□□□ -1.15
CLDN4-205ENST00000476494 CLDND1Q9NY35 253 aa7.88□□□□□ -1.15
CLDN4-205ENST00000476494 HDAC5Q9UQL6 1122 aa7.88□□□□□ -1.15
CLDN4-205ENST00000476494 GNEQ9Y223 722 aaKnown RBP7.88□□□□□ -1.15
CLDN4-205ENST00000476494 COG6Q9Y2V7 657 aa7.88□□□□□ -1.15
CLDN4-205ENST00000476494 UNC79Q9P2D8 2635 aa7.88□□□□□ -1.15
CLDN4-205ENST00000476494 KDM4AO75164 1064 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 TBX10O75333 385 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 CABYRO75952 493 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 EYA4O95677 639 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 RLBP1P12271 317 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 SMAD4Q13485 552 aaKnown RBP7.87□□□□□ -1.15
CLDN4-205ENST00000476494 NBPF20Q3BBV1 942 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 TIGD5Q53EQ6 642 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 CCDC102BQ68D86 513 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 RIOX2Q8IUF8 465 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 ITPRIPQ8IWB1 547 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 KIAA2013Q8IYS2 634 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 TMEM57Q8N5G2 664 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 SH3RF3Q8TEJ3 882 aaPredicted RBP7.87□□□□□ -1.15
CLDN4-205ENST00000476494 ATG4CQ96DT6 458 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 MSLNLQ96KJ4 702 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 MMP19Q99542 508 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 TRMT13Q9NUP7 481 aaKnown RBP7.87□□□□□ -1.15
CLDN4-205ENST00000476494 GNL3LQ9NVN8 582 aaKnown RBP7.87□□□□□ -1.15
CLDN4-205ENST00000476494 ABCF2Q9UG63 623 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 CTNNA3Q9UI47 895 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 PALD1Q9ULE6 856 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 SPEGQ15772 3267 aa7.87□□□□□ -1.15
CLDN4-205ENST00000476494 SCN10AQ9Y5Y9 1956 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.86□□□□□ -1.15
CLDN4-205ENST00000476494 H3BNC9 293 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 EYA2O00167 538 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 ZZEF1O43149 2961 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 ALDH1L1O75891 902 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 SLC25A27O95847 323 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 ARP10275 920 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 PTGS1P23219 599 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 ADORA1P30542 326 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 PSMC6P62333 389 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 HYAL1Q12794 435 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 CLUL1Q15846 466 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 SPTY2D1Q68D10 685 aaPredicted RBP7.86□□□□□ -1.15
CLDN4-205ENST00000476494 ZNF467Q7Z7K2 595 aaPredicted RBP7.86□□□□□ -1.15
CLDN4-205ENST00000476494 TEX11Q8IYF3 940 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 MAGEB6Q8N7X4 407 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 FBXO22Q8NEZ5 403 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 REPS2Q8NFH8 660 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 FEZ1Q99689 392 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 SIL1Q9H173 461 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 NSUN3Q9H649 340 aaKnown RBP7.86□□□□□ -1.15
CLDN4-205ENST00000476494 SPC25Q9HBM1 224 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 C9orf78Q9NZ63 289 aaPredicted RBP7.86□□□□□ -1.15
CLDN4-205ENST00000476494 ZHX1Q9UKY1 873 aaPredicted RBP7.86□□□□□ -1.15
CLDN4-205ENST00000476494 PCDHGC5Q9Y5F6 944 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 MICAL3Q7RTP6 2002 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 FANCMQ8IYD8 2048 aa7.86□□□□□ -1.15
CLDN4-205ENST00000476494 FLT1P17948 1338 aa7.85□□□□□ -1.15
CLDN4-205ENST00000476494 PITPNM1O00562 1244 aa7.85□□□□□ -1.15
CLDN4-205ENST00000476494 NCK2O43639 380 aa7.85□□□□□ -1.15
CLDN4-205ENST00000476494 GNAI3P08754 354 aa7.85□□□□□ -1.15
CLDN4-205ENST00000476494 ICAM3P32942 547 aa7.85□□□□□ -1.15
CLDN4-205ENST00000476494 PPP4CP60510 307 aa7.85□□□□□ -1.15
CLDN4-205ENST00000476494 HTRA4P83105 476 aaPredicted RBP7.85□□□□□ -1.15
CLDN4-205ENST00000476494 MKRN4PQ13434 485 aaPredicted RBP7.85□□□□□ -1.15
CLDN4-205ENST00000476494 PLS1Q14651 629 aa7.85□□□□□ -1.15
CLDN4-205ENST00000476494 EPC2Q52LR7 807 aa7.85□□□□□ -1.15
CLDN4-205ENST00000476494 SIAH1Q8IUQ4 282 aa7.85□□□□□ -1.15
CLDN4-205ENST00000476494 CRACR2BQ8N4Y2 399 aaPredicted RBP7.85□□□□□ -1.15
CLDN4-205ENST00000476494 SP7Q8TDD2 431 aaPredicted RBP7.85□□□□□ -1.15
CLDN4-205ENST00000476494 ABHD16BQ9H3Z7 469 aa7.85□□□□□ -1.15
CLDN4-205ENST00000476494 RWDD1Q9H446 243 aaPredicted RBP7.85□□□□□ -1.15
CLDN4-205ENST00000476494 ZBTB40Q9NUA8 1239 aa7.85□□□□□ -1.15
CLDN4-205ENST00000476494 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.85□□□□□ -1.15
CLDN4-205ENST00000476494 ZNF214Q9UL59 606 aaPredicted RBP7.85□□□□□ -1.15
CLDN4-205ENST00000476494 NLRC5Q86WI3 1866 aa7.85□□□□□ -1.15
CLDN4-205ENST00000476494 ASH1LQ9NR48 2969 aaKnown RBP7.84□□□□□ -1.15
CLDN4-205ENST00000476494 MYH1P12882 1939 aa7.84□□□□□ -1.15
CLDN4-205ENST00000476494 LDHCP07864 332 aa7.84□□□□□ -1.15
CLDN4-205ENST00000476494 SUPT20HL2P0C7V6 817 aa7.84□□□□□ -1.15
CLDN4-205ENST00000476494 GTF2F1P35269 517 aaKnown RBP eCLIP7.84□□□□□ -1.15
CLDN4-205ENST00000476494 ADAM15Q13444 863 aa7.84□□□□□ -1.15
CLDN4-205ENST00000476494 RAB3GAP1Q15042 981 aa7.84□□□□□ -1.15
CLDN4-205ENST00000476494 ATP2B3Q16720 1220 aa7.84□□□□□ -1.15
CLDN4-205ENST00000476494 PTPROQ16827 1216 aa7.84□□□□□ -1.15
CLDN4-205ENST00000476494 RSPO4Q2I0M5 234 aaPredicted RBP7.84□□□□□ -1.15
CLDN4-205ENST00000476494 SLC4A10Q6U841 1118 aa7.84□□□□□ -1.15
CLDN4-205ENST00000476494 EP400NLQ6ZTU2 488 aa7.84□□□□□ -1.15
CLDN4-205ENST00000476494 ERICH6Q7L0X2 663 aa7.84□□□□□ -1.15
CLDN4-205ENST00000476494 CENPQQ7L2Z9 268 aaPredicted RBP7.84□□□□□ -1.15
CLDN4-205ENST00000476494 MAPKAPK5Q8IW41 473 aa7.84□□□□□ -1.15
CLDN4-205ENST00000476494 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.84□□□□□ -1.15
CLDN4-205ENST00000476494 TGFBRAP1Q8WUH2 860 aa7.84□□□□□ -1.15
CLDN4-205ENST00000476494 CTAGE1Q96RT6 745 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms