RNA–Protein interactions for RNA: ENST00000476173.5

TMEM254-211, Transcript of transmembrane protein 254, humanhuman

TSL 4

Gene TMEM254, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-211ENST00000476173 DDX11Q96FC9 970 aa11.32□□□□□ -0.6
TMEM254-211ENST00000476173 INTS4Q96HW7 963 aaKnown RBP11.32□□□□□ -0.6
TMEM254-211ENST00000476173 AGBL1Q96MI9 1066 aa11.32□□□□□ -0.6
TMEM254-211ENST00000476173 PAGR1Q9BTK6 254 aa11.32□□□□□ -0.6
TMEM254-211ENST00000476173 CFHR5Q9BXR6 569 aa11.32□□□□□ -0.6
TMEM254-211ENST00000476173 R3HDMLQ9H3Y0 253 aa11.32□□□□□ -0.6
TMEM254-211ENST00000476173 RAVER2Q9HCJ3 691 aaKnown RBP11.32□□□□□ -0.6
TMEM254-211ENST00000476173 RBM27Q9P2N5 1060 aaKnown RBP11.32□□□□□ -0.6
TMEM254-211ENST00000476173 ORC3Q9UBD5 711 aaPredicted RBP11.32□□□□□ -0.6
TMEM254-211ENST00000476173 MORF4L1Q9UBU8 362 aa11.32□□□□□ -0.6
TMEM254-211ENST00000476173 SEC63Q9UGP8 760 aaKnown RBP11.32□□□□□ -0.6
TMEM254-211ENST00000476173 MYH6P13533 1939 aa11.32□□□□□ -0.6
TMEM254-211ENST00000476173 STK36Q9NRP7 1315 aa11.32□□□□□ -0.6
TMEM254-211ENST00000476173 TRPA1O75762 1119 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 DEXIO95424 95 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 BCRP11274 1271 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 SCG2P13521 617 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 STAT3P40763 770 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 ERVK-9P63128 1117 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 ERVK-24P63145 666 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 AKAP17AQ02040 695 aaKnown RBP11.31□□□□□ -0.6
TMEM254-211ENST00000476173 FAM110CQ1W6H9 321 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 Q3C1V9 767 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 C17orf99Q6UX52 265 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 FBXO11Q86XK2 927 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 CPXCR1Q8N123 301 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 GPRC5AQ8NFJ5 357 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 TMEM106CQ9BVX2 250 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 TEX13BQ9BXU2 312 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 SPATC1LQ9H0A9 340 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 CPA4Q9UI42 421 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 PNMA2Q9UL42 364 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 RIPK3Q9Y572 518 aa11.31□□□□□ -0.6
TMEM254-211ENST00000476173 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.31□□□□□ -0.6
TMEM254-211ENST00000476173 CTDP1Q9Y5B0 961 aaPredicted RBP11.31□□□□□ -0.6
TMEM254-211ENST00000476173 TBC1D8O95759 1140 aa11.3□□□□□ -0.6
TMEM254-211ENST00000476173 TAL1P17542 331 aaPredicted RBP11.3□□□□□ -0.6
TMEM254-211ENST00000476173 HMGN5P82970 282 aaKnown RBP11.3□□□□□ -0.6
TMEM254-211ENST00000476173 MAP2K1Q02750 393 aaPredicted RBP11.3□□□□□ -0.6
TMEM254-211ENST00000476173 PLS1Q14651 629 aa11.3□□□□□ -0.6
TMEM254-211ENST00000476173 WWC2Q6AWC2 1192 aa11.3□□□□□ -0.6
TMEM254-211ENST00000476173 SNRNP48Q6IEG0 339 aaKnown RBP11.3□□□□□ -0.6
TMEM254-211ENST00000476173 RIOX2Q8IUF8 465 aa11.3□□□□□ -0.6
TMEM254-211ENST00000476173 GPKOWQ92917 476 aaPredicted RBP eCLIP11.3□□□□□ -0.6
TMEM254-211ENST00000476173 AIFM3Q96NN9 605 aa11.3□□□□□ -0.6
TMEM254-211ENST00000476173 AMNQ9BXJ7 453 aa11.3□□□□□ -0.6
TMEM254-211ENST00000476173 MOV10L1Q9BXT6 1211 aaKnown RBP11.3□□□□□ -0.6
TMEM254-211ENST00000476173 CCPG1Q9ULG6 757 aa11.3□□□□□ -0.6
TMEM254-211ENST00000476173 STXBP3O00186 592 aa11.29□□□□□ -0.6
TMEM254-211ENST00000476173 GJB2P29033 226 aa11.29□□□□□ -0.6
TMEM254-211ENST00000476173 TRAF1Q13077 416 aa11.29□□□□□ -0.6
TMEM254-211ENST00000476173 USH1GQ495M9 461 aa11.29□□□□□ -0.6
TMEM254-211ENST00000476173 TYW1BQ6NUM6 668 aa11.29□□□□□ -0.6
TMEM254-211ENST00000476173 HEATR3Q7Z4Q2 680 aa11.29□□□□□ -0.6
TMEM254-211ENST00000476173 EFCAB3Q8N7B9 438 aa11.29□□□□□ -0.6
TMEM254-211ENST00000476173 CLEC4DQ8WXI8 215 aa11.29□□□□□ -0.6
TMEM254-211ENST00000476173 COA7Q96BR5 231 aa11.29□□□□□ -0.6
TMEM254-211ENST00000476173 SHISA4Q96DD7 197 aa11.29□□□□□ -0.6
TMEM254-211ENST00000476173 WBP1LQ9NX94 342 aa11.29□□□□□ -0.6
TMEM254-211ENST00000476173 SAGE1Q9NXZ1 904 aa11.29□□□□□ -0.6
TMEM254-211ENST00000476173 BARHL2Q9NY43 387 aa11.29□□□□□ -0.6
TMEM254-211ENST00000476173 SMC3Q9UQE7 1217 aa11.29□□□□□ -0.6
TMEM254-211ENST00000476173 PCDHA1Q9Y5I3 950 aa11.29□□□□□ -0.6
TMEM254-211ENST00000476173 ABCB11O95342 1321 aa11.29□□□□□ -0.6
TMEM254-211ENST00000476173 OPLAHO14841 1288 aa11.28□□□□□ -0.6
TMEM254-211ENST00000476173 SLC25A27O95847 323 aa11.28□□□□□ -0.6
TMEM254-211ENST00000476173 ALAS1P13196 640 aa11.28□□□□□ -0.6
TMEM254-211ENST00000476173 SLC4A3P48751 1232 aa11.28□□□□□ -0.6
TMEM254-211ENST00000476173 CCNA1P78396 465 aa11.28□□□□□ -0.6
TMEM254-211ENST00000476173 TKFCQ3LXA3 575 aa11.28□□□□□ -0.6
TMEM254-211ENST00000476173 MUM1L1Q5H9M0 696 aa11.28□□□□□ -0.6
TMEM254-211ENST00000476173 JMYQ8N9B5 988 aa11.28□□□□□ -0.6
TMEM254-211ENST00000476173 SHCBP1Q8NEM2 672 aa11.28□□□□□ -0.6
TMEM254-211ENST00000476173 WASF1Q92558 559 aa11.28□□□□□ -0.6
TMEM254-211ENST00000476173 TRERF1Q96PN7 1200 aa11.28□□□□□ -0.6
TMEM254-211ENST00000476173 ALG1Q9BT22 464 aa11.28□□□□□ -0.6
TMEM254-211ENST00000476173 PORCNQ9H237 461 aa11.28□□□□□ -0.6
TMEM254-211ENST00000476173 SH3GLB2Q9NR46 395 aa11.28□□□□□ -0.6
TMEM254-211ENST00000476173 HOMER2Q9NSB8 354 aa11.28□□□□□ -0.6
TMEM254-211ENST00000476173 GJB4Q9NTQ9 266 aa11.28□□□□□ -0.6
TMEM254-211ENST00000476173 RNF146Q9NTX7 359 aa11.28□□□□□ -0.6
TMEM254-211ENST00000476173 hCG_1984214I3L0E3 225 aa11.27□□□□□ -0.61
TMEM254-211ENST00000476173 HSP90AA1P07900 732 aaKnown RBP11.27□□□□□ -0.61
TMEM254-211ENST00000476173 ERCC3P19447 782 aa11.27□□□□□ -0.61
TMEM254-211ENST00000476173 NAPAP54920 295 aa11.27□□□□□ -0.61
TMEM254-211ENST00000476173 PPP1R18Q6NYC8 613 aa11.27□□□□□ -0.61
TMEM254-211ENST00000476173 NCAPG2Q86XI2 1143 aa11.27□□□□□ -0.61
TMEM254-211ENST00000476173 ZNF713Q8N859 430 aaPredicted RBP11.27□□□□□ -0.61
TMEM254-211ENST00000476173 FAM184AQ8NB25 1140 aa11.27□□□□□ -0.61
TMEM254-211ENST00000476173 CHST13Q8NET6 341 aa11.27□□□□□ -0.61
TMEM254-211ENST00000476173 BEGAINQ9BUH8 593 aa11.27□□□□□ -0.61
TMEM254-211ENST00000476173 MROH8Q9H579 483 aa11.27□□□□□ -0.61
TMEM254-211ENST00000476173 EFCC1Q9HA90 598 aa11.27□□□□□ -0.61
TMEM254-211ENST00000476173 VPS54Q9P1Q0 977 aa11.27□□□□□ -0.61
TMEM254-211ENST00000476173 MRPL11Q9Y3B7 192 aaKnown RBP11.27□□□□□ -0.61
TMEM254-211ENST00000476173 DOCK3Q8IZD9 2030 aa11.26□□□□□ -0.61
TMEM254-211ENST00000476173 GPR25O00155 361 aa11.26□□□□□ -0.61
TMEM254-211ENST00000476173 NFIBO00712 420 aa11.26□□□□□ -0.61
TMEM254-211ENST00000476173 COPB2P35606 906 aa11.26□□□□□ -0.61
TMEM254-211ENST00000476173 NOM1Q5C9Z4 860 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms