RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 NAT10Q9H0A0 1025 aaKnown RBP23.26■■□□□ 1.31
ITGA4-207ENST00000476089 FEM1BQ9UK73 627 aa23.26■■□□□ 1.31
ITGA4-207ENST00000476089 USH1GQ495M9 461 aa23.25■■□□□ 1.31
ITGA4-207ENST00000476089 CCDC84Q86UT8 332 aaPredicted RBP23.25■■□□□ 1.31
ITGA4-207ENST00000476089 CBX8Q9HC52 389 aa23.25■■□□□ 1.31
ITGA4-207ENST00000476089 ADARB2Q9NS39 739 aaKnown RBP23.25■■□□□ 1.31
ITGA4-207ENST00000476089 USP25Q9UHP3 1055 aa23.25■■□□□ 1.31
ITGA4-207ENST00000476089 SERTAD1Q9UHV2 236 aa23.25■■□□□ 1.31
ITGA4-207ENST00000476089 OR52Z1P0C646 297 aa23.24■■□□□ 1.31
ITGA4-207ENST00000476089 HIRAP54198 1017 aaPredicted RBP23.24■■□□□ 1.31
ITGA4-207ENST00000476089 C9orf131Q5VYM1 1079 aa23.24■■□□□ 1.31
ITGA4-207ENST00000476089 CEP57L1Q8IYX8 460 aa23.24■■□□□ 1.31
ITGA4-207ENST00000476089 LPAR1Q92633 364 aa23.24■■□□□ 1.31
ITGA4-207ENST00000476089 KIFC2Q96AC6 838 aa23.24■■□□□ 1.31
ITGA4-207ENST00000476089 PPP1R9BQ96SB3 815 aa23.24■■□□□ 1.31
ITGA4-207ENST00000476089 TMEM60Q9H2L4 133 aa23.24■■□□□ 1.31
ITGA4-207ENST00000476089 IL17AQ16552 155 aa23.24■■□□□ 1.31
ITGA4-207ENST00000476089 SUPT20HL1Q3ZLR7 823 aa23.24■■□□□ 1.31
ITGA4-207ENST00000476089 DHX58Q96C10 678 aa23.24■■□□□ 1.31
ITGA4-207ENST00000476089 NAP1L4Q99733 375 aaKnown RBP23.24■■□□□ 1.31
ITGA4-207ENST00000476089 KIAA1683Q9H0B3 1180 aa23.24■■□□□ 1.31
ITGA4-207ENST00000476089 PITPNM2Q9BZ72 1349 aa23.23■■□□□ 1.31
ITGA4-207ENST00000476089 INPP5BP32019 993 aa23.23■■□□□ 1.31
ITGA4-207ENST00000476089 PNOCQ13519 176 aa23.23■■□□□ 1.31
ITGA4-207ENST00000476089 SCYL3Q8IZE3 742 aa23.23■■□□□ 1.31
ITGA4-207ENST00000476089 NLRP12P59046 1061 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 AP3B2Q13367 1082 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 POSTNQ15063 836 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 PRAMEF18Q5VWM3 479 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 LUZP1Q86V48 1076 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 WRNIP1Q96S55 665 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 PICK1Q9NRD5 415 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 TUBE1Q9UJT0 475 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 ZNF112Q9UJU3 913 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 USP17L15C9J2P7 530 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 USP17L13C9JLJ4 530 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 USP17L11C9JVI0 530 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 USP17L18D6R9N7 530 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 USP17L22D6RA61 530 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 USP17L17D6RBQ6 530 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 USP17L19D6RCP7 530 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 USP17L20D6RJB6 530 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 WDR46O15213 610 aaKnown RBP23.22■■□□□ 1.31
ITGA4-207ENST00000476089 ACTN4O43707 911 aaKnown RBP23.22■■□□□ 1.31
ITGA4-207ENST00000476089 SLFN14P0C7P3 912 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 USP17L24Q0WX57 530 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 DPY19L2Q6NUT2 758 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 USP17L6PQ6QN14 398 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 IQUBQ8NA54 791 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 AS3MTQ9HBK9 375 aa23.22■■□□□ 1.31
ITGA4-207ENST00000476089 BIN1O00499 593 aa23.21■■□□□ 1.31
ITGA4-207ENST00000476089 USP14P54578 494 aa23.21■■□□□ 1.31
ITGA4-207ENST00000476089 C11orf57Q6ZUT1 292 aaPredicted RBP23.21■■□□□ 1.31
ITGA4-207ENST00000476089 RANBP17Q9H2T7 1088 aaKnown RBP23.21■■□□□ 1.31
ITGA4-207ENST00000476089 FOSP01100 380 aaPredicted RBP23.2■■□□□ 1.3
ITGA4-207ENST00000476089 PLCB2Q00722 1185 aa23.2■■□□□ 1.3
ITGA4-207ENST00000476089 MDM2Q00987 491 aaPredicted RBP23.2■■□□□ 1.3
ITGA4-207ENST00000476089 CALCRLQ16602 461 aa23.2■■□□□ 1.3
ITGA4-207ENST00000476089 PPP4R3AQ6IN85 833 aa23.2■■□□□ 1.3
ITGA4-207ENST00000476089 SAMD1Q6SPF0 538 aaPredicted RBP23.2■■□□□ 1.3
ITGA4-207ENST00000476089 DCPSQ96C86 337 aaKnown RBP23.2■■□□□ 1.3
ITGA4-207ENST00000476089 TRIM44Q96DX7 344 aaPredicted RBP23.2■■□□□ 1.3
ITGA4-207ENST00000476089 AK8Q96MA6 479 aa23.2■■□□□ 1.3
ITGA4-207ENST00000476089 DOCK1Q14185 1865 aa23.2■■□□□ 1.3
ITGA4-207ENST00000476089 A0A087X0B3 334 aa23.19■■□□□ 1.3
ITGA4-207ENST00000476089 BECN2A8MW95 431 aa23.19■■□□□ 1.3
ITGA4-207ENST00000476089 GOLGA6L19H0YKK7 550 aa23.19■■□□□ 1.3
ITGA4-207ENST00000476089 GCFC2P16383 781 aaKnown RBP23.19■■□□□ 1.3
ITGA4-207ENST00000476089 UBA7P41226 1012 aa23.19■■□□□ 1.3
ITGA4-207ENST00000476089 CCDC174Q6PII3 467 aa23.19■■□□□ 1.3
ITGA4-207ENST00000476089 TEX2Q8IWB9 1127 aa23.19■■□□□ 1.3
ITGA4-207ENST00000476089 RASSF8Q8NHQ8 419 aa23.19■■□□□ 1.3
ITGA4-207ENST00000476089 ANO3Q9BYT9 981 aa23.19■■□□□ 1.3
ITGA4-207ENST00000476089 PCDHA5Q9Y5H7 936 aa23.19■■□□□ 1.3
ITGA4-207ENST00000476089 MEIS2O14770 477 aa23.19■■□□□ 1.3
ITGA4-207ENST00000476089 POTEDQ86YR6 584 aa23.19■■□□□ 1.3
ITGA4-207ENST00000476089 SMARCE1Q969G3 411 aa23.19■■□□□ 1.3
ITGA4-207ENST00000476089 WDR18Q9BV38 432 aa23.19■■□□□ 1.3
ITGA4-207ENST00000476089 A0A087WWV3 80 aa23.18■■□□□ 1.3
ITGA4-207ENST00000476089 SPDYE3A6NKU9 549 aa23.18■■□□□ 1.3
ITGA4-207ENST00000476089 FOXN1O15353 648 aa23.18■■□□□ 1.3
ITGA4-207ENST00000476089 SMC2O95347 1197 aa23.18■■□□□ 1.3
ITGA4-207ENST00000476089 TDP2O95551 362 aa23.18■■□□□ 1.3
ITGA4-207ENST00000476089 USP11P51784 963 aa23.18■■□□□ 1.3
ITGA4-207ENST00000476089 PRPF38AQ8NAV1 312 aaKnown RBP23.18■■□□□ 1.3
ITGA4-207ENST00000476089 ZKSCAN4Q969J2 545 aaPredicted RBP23.18■■□□□ 1.3
ITGA4-207ENST00000476089 PDLIM2Q96JY6 352 aa23.18■■□□□ 1.3
ITGA4-207ENST00000476089 CCDC39Q9UFE4 941 aa23.18■■□□□ 1.3
ITGA4-207ENST00000476089 MTMR2Q13614 643 aa23.17■■□□□ 1.3
ITGA4-207ENST00000476089 TMEM266Q2M3C6 531 aa23.17■■□□□ 1.3
ITGA4-207ENST00000476089 DPCR1Q3MIW9 517 aa23.17■■□□□ 1.3
ITGA4-207ENST00000476089 SULF1Q8IWU6 871 aa23.17■■□□□ 1.3
ITGA4-207ENST00000476089 KLRG1Q96E93 195 aa23.17■■□□□ 1.3
ITGA4-207ENST00000476089 CCSER1Q9C0I3 900 aa23.17■■□□□ 1.3
ITGA4-207ENST00000476089 FBXO28Q9NVF7 368 aa23.17■■□□□ 1.3
ITGA4-207ENST00000476089 DDX25Q9UHL0 483 aaKnown RBP23.17■■□□□ 1.3
ITGA4-207ENST00000476089 MRPL11Q9Y3B7 192 aaKnown RBP23.17■■□□□ 1.3
ITGA4-207ENST00000476089 PTPRAP18433 802 aa23.17■■□□□ 1.3
ITGA4-207ENST00000476089 SPP2Q13103 211 aa23.17■■□□□ 1.3
ITGA4-207ENST00000476089 GPR162Q16538 588 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms