RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 GMCL1P1Q8NEA9 526 aa17.37■□□□□ 0.37
RPUSD3-215ENST00000475470 KIF13BQ9NQT8 1826 aa17.37■□□□□ 0.37
RPUSD3-215ENST00000475470 TNNI2P48788 182 aa17.37■□□□□ 0.37
RPUSD3-215ENST00000475470 CUL4BQ13620 913 aa17.37■□□□□ 0.37
RPUSD3-215ENST00000475470 UBE2SQ16763 222 aa17.37■□□□□ 0.37
RPUSD3-215ENST00000475470 AGBL3Q8NEM8 1001 aa17.37■□□□□ 0.37
RPUSD3-215ENST00000475470 MTRQ99707 1265 aa17.37■□□□□ 0.37
RPUSD3-215ENST00000475470 PSTPIP2Q9H939 334 aa17.37■□□□□ 0.37
RPUSD3-215ENST00000475470 ATF5Q9Y2D1 282 aaPredicted RBP17.37■□□□□ 0.37
RPUSD3-215ENST00000475470 CDK11BP21127 795 aaKnown RBP17.36■□□□□ 0.37
RPUSD3-215ENST00000475470 POLD1P28340 1107 aa17.36■□□□□ 0.37
RPUSD3-215ENST00000475470 JAG1P78504 1218 aa17.36■□□□□ 0.37
RPUSD3-215ENST00000475470 ARID5BQ14865 1188 aa17.36■□□□□ 0.37
RPUSD3-215ENST00000475470 QRICH1Q2TAL8 776 aa17.36■□□□□ 0.37
RPUSD3-215ENST00000475470 SPDYE2Q495Y8 402 aa17.36■□□□□ 0.37
RPUSD3-215ENST00000475470 VEZTQ9HBM0 779 aa17.36■□□□□ 0.37
RPUSD3-215ENST00000475470 TECP42680 631 aa17.36■□□□□ 0.37
RPUSD3-215ENST00000475470 RRP1BQ14684 758 aaKnown RBP17.36■□□□□ 0.37
RPUSD3-215ENST00000475470 CDC37Q16543 378 aaPredicted RBP17.36■□□□□ 0.37
RPUSD3-215ENST00000475470 DALRD3Q5D0E6 543 aaKnown RBP17.36■□□□□ 0.37
RPUSD3-215ENST00000475470 KLHL10Q6JEL2 608 aa17.36■□□□□ 0.37
RPUSD3-215ENST00000475470 CABP7Q86V35 215 aa17.36■□□□□ 0.37
RPUSD3-215ENST00000475470 POTEDQ86YR6 584 aa17.36■□□□□ 0.37
RPUSD3-215ENST00000475470 PLIN2Q99541 437 aa17.36■□□□□ 0.37
RPUSD3-215ENST00000475470 NDUFB10O96000 172 aa17.35■□□□□ 0.37
RPUSD3-215ENST00000475470 CLK2P49760 499 aaKnown RBP17.35■□□□□ 0.37
RPUSD3-215ENST00000475470 IKQ13123 557 aaPredicted RBP17.35■□□□□ 0.37
RPUSD3-215ENST00000475470 CALCRLQ16602 461 aa17.35■□□□□ 0.37
RPUSD3-215ENST00000475470 HSP90AA4PQ58FG1 418 aa17.35■□□□□ 0.37
RPUSD3-215ENST00000475470 DPF2Q92785 391 aa17.35■□□□□ 0.37
RPUSD3-215ENST00000475470 GMCL1Q96IK5 515 aa17.35■□□□□ 0.37
RPUSD3-215ENST00000475470 GLT8D2Q9H1C3 349 aa17.35■□□□□ 0.37
RPUSD3-215ENST00000475470 RMND1Q9NWS8 449 aa17.35■□□□□ 0.37
RPUSD3-215ENST00000475470 PCDHA1Q9Y5I3 950 aa17.35■□□□□ 0.37
RPUSD3-215ENST00000475470 CD44P16070 742 aaKnown RBP17.35■□□□□ 0.37
RPUSD3-215ENST00000475470 TXKP42681 527 aa17.35■□□□□ 0.37
RPUSD3-215ENST00000475470 CXCL9Q07325 125 aa17.35■□□□□ 0.37
RPUSD3-215ENST00000475470 NAALADL2Q58DX5 795 aa17.35■□□□□ 0.37
RPUSD3-215ENST00000475470 SMYD4Q8IYR2 804 aaPredicted RBP17.35■□□□□ 0.37
RPUSD3-215ENST00000475470 NUP88Q99567 741 aaPredicted RBP17.35■□□□□ 0.37
RPUSD3-215ENST00000475470 R3HCC1Q9Y3T6 440 aaKnown RBP17.35■□□□□ 0.37
RPUSD3-215ENST00000475470 TDP2O95551 362 aa17.34■□□□□ 0.37
RPUSD3-215ENST00000475470 RPN1P04843 607 aaKnown RBP17.34■□□□□ 0.37
RPUSD3-215ENST00000475470 MED15Q96RN5 788 aa17.34■□□□□ 0.37
RPUSD3-215ENST00000475470 PPP1R3GB7ZBB8 358 aa17.33■□□□□ 0.37
RPUSD3-215ENST00000475470 BMP3P12645 472 aa17.33■□□□□ 0.37
RPUSD3-215ENST00000475470 ZNF18P17022 549 aa17.33■□□□□ 0.37
RPUSD3-215ENST00000475470 MTMR9Q96QG7 549 aa17.33■□□□□ 0.37
RPUSD3-215ENST00000475470 TAOK3Q9H2K8 898 aa17.33■□□□□ 0.37
RPUSD3-215ENST00000475470 CUEDC2Q9H467 287 aa17.33■□□□□ 0.37
RPUSD3-215ENST00000475470 PPP1R1BQ9UD71 204 aaPredicted RBP17.33■□□□□ 0.37
RPUSD3-215ENST00000475470 SYNRGQ9UMZ2 1314 aa17.33■□□□□ 0.37
RPUSD3-215ENST00000475470 CNTNAP1P78357 1384 aa17.33■□□□□ 0.37
RPUSD3-215ENST00000475470 TMEM232C9JQI7 657 aa17.33■□□□□ 0.36
RPUSD3-215ENST00000475470 SKILP12757 684 aa17.33■□□□□ 0.36
RPUSD3-215ENST00000475470 STX17P56962 302 aa17.33■□□□□ 0.36
RPUSD3-215ENST00000475470 DHX8Q14562 1220 aaKnown RBP17.33■□□□□ 0.36
RPUSD3-215ENST00000475470 TMEM266Q2M3C6 531 aa17.33■□□□□ 0.36
RPUSD3-215ENST00000475470 FKBP1CQ5VVH2 108 aa17.33■□□□□ 0.36
RPUSD3-215ENST00000475470 SPATA1Q5VX52 437 aa17.33■□□□□ 0.36
RPUSD3-215ENST00000475470 MTMR14Q8NCE2 650 aa17.33■□□□□ 0.36
RPUSD3-215ENST00000475470 JDP2Q8WYK2 163 aa17.33■□□□□ 0.36
RPUSD3-215ENST00000475470 ARHGEF10LQ9HCE6 1279 aa17.33■□□□□ 0.36
RPUSD3-215ENST00000475470 A0A1W2PRG0 241 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 SLC37A4O43826 429 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 MYL1P05976 194 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 CIAPIN1Q6FI81 312 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 CCDC125Q86Z20 511 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 CCDC150Q8NCX0 1101 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 SAMSN1Q9NSI8 373 aaKnown RBP17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 SYNPO2Q9UMS6 1093 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 ARFGEF1Q9Y6D6 1849 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 EDIL3O43854 480 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 PLCG1P19174 1290 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 ZNF658Q5TYW1 1059 aaPredicted RBP17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 SYDE2Q5VT97 1194 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 PPP4R3AQ6IN85 833 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 IGSF22Q8N9C0 903 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 CALML4Q96GE6 196 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 AMNQ9BXJ7 453 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 RAB34Q9BZG1 259 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 TMEM39BQ9GZU3 492 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 MTFR1LQ9H019 292 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 MAGEF1Q9HAY2 307 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 KBTBD4Q9NVX7 518 aa17.32■□□□□ 0.36
RPUSD3-215ENST00000475470 LRWD1Q9UFC0 647 aa17.31■□□□□ 0.36
RPUSD3-215ENST00000475470 USP17L15C9J2P7 530 aa17.31■□□□□ 0.36
RPUSD3-215ENST00000475470 USP17L13C9JLJ4 530 aa17.31■□□□□ 0.36
RPUSD3-215ENST00000475470 USP17L11C9JVI0 530 aa17.31■□□□□ 0.36
RPUSD3-215ENST00000475470 USP17L18D6R9N7 530 aa17.31■□□□□ 0.36
RPUSD3-215ENST00000475470 USP17L22D6RA61 530 aa17.31■□□□□ 0.36
RPUSD3-215ENST00000475470 USP17L17D6RBQ6 530 aa17.31■□□□□ 0.36
RPUSD3-215ENST00000475470 USP17L19D6RCP7 530 aa17.31■□□□□ 0.36
RPUSD3-215ENST00000475470 USP17L20D6RJB6 530 aa17.31■□□□□ 0.36
RPUSD3-215ENST00000475470 SFPQP23246 707 aaKnown RBP eCLIP17.31■□□□□ 0.36
RPUSD3-215ENST00000475470 FXR2P51116 673 aaKnown RBP eCLIP17.31■□□□□ 0.36
RPUSD3-215ENST00000475470 SNAP25P60880 206 aa17.31■□□□□ 0.36
RPUSD3-215ENST00000475470 USP17L24Q0WX57 530 aa17.31■□□□□ 0.36
RPUSD3-215ENST00000475470 USP17L6PQ6QN14 398 aa17.31■□□□□ 0.36
RPUSD3-215ENST00000475470 FAM83AQ86UY5 434 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms