RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 TTLL4Q14679 1199 aa21.47■■□□□ 1.03
RNF220-212ENST00000475378 MKL1Q969V6 931 aa21.47■■□□□ 1.03
RNF220-212ENST00000475378 CLIP2Q9UDT6 1046 aa21.47■■□□□ 1.03
RNF220-212ENST00000475378 TANC1Q9C0D5 1861 aa21.47■■□□□ 1.03
RNF220-212ENST00000475378 EPOPA6NHQ4 379 aa21.46■■□□□ 1.03
RNF220-212ENST00000475378 ZBBXA8MT70 800 aa21.46■■□□□ 1.03
RNF220-212ENST00000475378 TLL1O43897 1013 aa21.46■■□□□ 1.03
RNF220-212ENST00000475378 PSMC6P62333 389 aa21.46■■□□□ 1.03
RNF220-212ENST00000475378 SKIV2LQ15477 1246 aaKnown RBP21.46■■□□□ 1.03
RNF220-212ENST00000475378 NOL8Q76FK4 1167 aaKnown RBP21.46■■□□□ 1.03
RNF220-212ENST00000475378 A1CFQ9NQ94 594 aaKnown RBP21.46■■□□□ 1.03
RNF220-212ENST00000475378 HCN4Q9Y3Q4 1203 aa21.46■■□□□ 1.03
RNF220-212ENST00000475378 PIEZO1Q92508 2521 aa21.46■■□□□ 1.03
RNF220-212ENST00000475378 SCN10AQ9Y5Y9 1956 aa21.45■■□□□ 1.02
RNF220-212ENST00000475378 MUC6Q6W4X9 2439 aa21.45■■□□□ 1.02
RNF220-212ENST00000475378 COL4A4P53420 1690 aaPredicted RBP21.45■■□□□ 1.02
RNF220-212ENST00000475378 CA3P07451 260 aa21.45■■□□□ 1.02
RNF220-212ENST00000475378 TMEM67Q5HYA8 995 aa21.45■■□□□ 1.02
RNF220-212ENST00000475378 ALDH8A1Q9H2A2 487 aaPredicted RBP21.45■■□□□ 1.02
RNF220-212ENST00000475378 ACAD9Q9H845 621 aa21.45■■□□□ 1.02
RNF220-212ENST00000475378 HOMER2Q9NSB8 354 aa21.45■■□□□ 1.02
RNF220-212ENST00000475378 SYNPO2Q9UMS6 1093 aa21.45■■□□□ 1.02
RNF220-212ENST00000475378 COG5Q9UP83 839 aa21.45■■□□□ 1.02
RNF220-212ENST00000475378 DDX49Q9Y6V7 483 aaKnown RBP21.45■■□□□ 1.02
RNF220-212ENST00000475378 ASB14A6NK59 587 aa21.44■■□□□ 1.02
RNF220-212ENST00000475378 DYNC1LI2O43237 492 aaPredicted RBP21.44■■□□□ 1.02
RNF220-212ENST00000475378 GTPBP6O43824 516 aaPredicted RBP21.44■■□□□ 1.02
RNF220-212ENST00000475378 ZEB2O60315 1214 aa21.44■■□□□ 1.02
RNF220-212ENST00000475378 PFKMP08237 780 aa21.44■■□□□ 1.02
RNF220-212ENST00000475378 TMEM63BQ5T3F8 832 aa21.44■■□□□ 1.02
RNF220-212ENST00000475378 KRT40Q6A162 431 aa21.44■■□□□ 1.02
RNF220-212ENST00000475378 TAPT1Q6NXT6 567 aa21.44■■□□□ 1.02
RNF220-212ENST00000475378 STK11IPQ8N1F8 1099 aa21.44■■□□□ 1.02
RNF220-212ENST00000475378 GMCL1P1Q8NEA9 526 aa21.44■■□□□ 1.02
RNF220-212ENST00000475378 CEP95Q96GE4 821 aa21.44■■□□□ 1.02
RNF220-212ENST00000475378 STRBPQ96SI9 672 aaKnown RBP21.44■■□□□ 1.02
RNF220-212ENST00000475378 AP5M1Q9H0R1 490 aa21.44■■□□□ 1.02
RNF220-212ENST00000475378 MKNK2Q9HBH9 465 aa21.44■■□□□ 1.02
RNF220-212ENST00000475378 C11orf16Q9NQ32 467 aa21.44■■□□□ 1.02
RNF220-212ENST00000475378 PDGFCQ9NRA1 345 aa21.44■■□□□ 1.02
RNF220-212ENST00000475378 Q9Y3F1 56 aa21.44■■□□□ 1.02
RNF220-212ENST00000475378 ZNF536O15090 1300 aa21.44■■□□□ 1.02
RNF220-212ENST00000475378 TRIP12Q14669 1992 aaPredicted RBP21.43■■□□□ 1.02
RNF220-212ENST00000475378 GSG1L2A8MUP6 293 aa21.43■■□□□ 1.02
RNF220-212ENST00000475378 FDX1P10109 184 aa21.43■■□□□ 1.02
RNF220-212ENST00000475378 TMEM31Q5JXX7 168 aa21.43■■□□□ 1.02
RNF220-212ENST00000475378 KHSRPQ92945 711 aaKnown RBP eCLIP21.43■■□□□ 1.02
RNF220-212ENST00000475378 CERS4Q9HA82 394 aa21.43■■□□□ 1.02
RNF220-212ENST00000475378 MTMR4Q9NYA4 1195 aa21.43■■□□□ 1.02
RNF220-212ENST00000475378 ARHGEF15O94989 841 aa21.42■■□□□ 1.02
RNF220-212ENST00000475378 IQSEC1Q6DN90 963 aa21.42■■□□□ 1.02
RNF220-212ENST00000475378 GIMAP6Q6P9H5 292 aa21.42■■□□□ 1.02
RNF220-212ENST00000475378 SIRT2Q8IXJ6 389 aa21.42■■□□□ 1.02
RNF220-212ENST00000475378 RPAP2Q8IXW5 612 aaPredicted RBP21.42■■□□□ 1.02
RNF220-212ENST00000475378 LRRC47Q8N1G4 583 aaKnown RBP21.42■■□□□ 1.02
RNF220-212ENST00000475378 RNF146Q9NTX7 359 aa21.42■■□□□ 1.02
RNF220-212ENST00000475378 TRMT13Q9NUP7 481 aaKnown RBP21.42■■□□□ 1.02
RNF220-212ENST00000475378 GPR37L1O60883 481 aa21.41■■□□□ 1.02
RNF220-212ENST00000475378 CYP2C9P11712 490 aa21.41■■□□□ 1.02
RNF220-212ENST00000475378 BMP3P12645 472 aa21.41■■□□□ 1.02
RNF220-212ENST00000475378 ZSCAN25Q6NSZ9 544 aa21.41■■□□□ 1.02
RNF220-212ENST00000475378 FBXO16Q8IX29 292 aaPredicted RBP21.41■■□□□ 1.02
RNF220-212ENST00000475378 PANK1Q8TE04 598 aa21.41■■□□□ 1.02
RNF220-212ENST00000475378 BCL11AQ9H165 835 aa21.41■■□□□ 1.02
RNF220-212ENST00000475378 COG6Q9Y2V7 657 aa21.41■■□□□ 1.02
RNF220-212ENST00000475378 PLIN4Q96Q06 1357 aa21.4■■□□□ 1.02
RNF220-212ENST00000475378 MINDY4BA8MYZ0 360 aa21.4■■□□□ 1.02
RNF220-212ENST00000475378 CCER2I3L3R5 266 aa21.4■■□□□ 1.02
RNF220-212ENST00000475378 RAB11FIP3O75154 756 aa21.4■■□□□ 1.02
RNF220-212ENST00000475378 TTLL1O95922 423 aa21.4■■□□□ 1.02
RNF220-212ENST00000475378 TAP1Q03518 808 aa21.4■■□□□ 1.02
RNF220-212ENST00000475378 TKFCQ3LXA3 575 aa21.4■■□□□ 1.02
RNF220-212ENST00000475378 SLFN13Q68D06 897 aa21.4■■□□□ 1.02
RNF220-212ENST00000475378 DEFB128Q7Z7B8 93 aa21.4■■□□□ 1.02
RNF220-212ENST00000475378 SLC9A7Q96T83 725 aa21.4■■□□□ 1.02
RNF220-212ENST00000475378 TNKSO95271 1327 aa21.39■■□□□ 1.01
RNF220-212ENST00000475378 TMEM232C9JQI7 657 aa21.39■■□□□ 1.01
RNF220-212ENST00000475378 SUPT20HL2P0C7V6 817 aa21.39■■□□□ 1.01
RNF220-212ENST00000475378 EEPD1Q7L9B9 569 aa21.39■■□□□ 1.01
RNF220-212ENST00000475378 PHOSPHO2Q8TCD6 241 aa21.39■■□□□ 1.01
RNF220-212ENST00000475378 MORC4Q8TE76 937 aa21.39■■□□□ 1.01
RNF220-212ENST00000475378 HLA-CQ95604 372 aa21.39■■□□□ 1.01
RNF220-212ENST00000475378 TRERF1Q96PN7 1200 aa21.39■■□□□ 1.01
RNF220-212ENST00000475378 EPB41L4AQ9HCS5 686 aaPredicted RBP21.39■■□□□ 1.01
RNF220-212ENST00000475378 LPXNO60711 386 aa21.38■■□□□ 1.01
RNF220-212ENST00000475378 PRDM1O75626 825 aa21.38■■□□□ 1.01
RNF220-212ENST00000475378 STAT2P52630 851 aa21.38■■□□□ 1.01
RNF220-212ENST00000475378 ZNF444Q8N0Y2 327 aaPredicted RBP21.38■■□□□ 1.01
RNF220-212ENST00000475378 ARNTL2Q8WYA1 636 aa21.38■■□□□ 1.01
RNF220-212ENST00000475378 VTA1Q9NP79 307 aa21.38■■□□□ 1.01
RNF220-212ENST00000475378 CYP39A1Q9NYL5 469 aa21.38■■□□□ 1.01
RNF220-212ENST00000475378 HMMRO75330 724 aa21.37■■□□□ 1.01
RNF220-212ENST00000475378 ACTN1P12814 892 aa21.37■■□□□ 1.01
RNF220-212ENST00000475378 PURAQ00577 322 aaKnown RBP21.37■■□□□ 1.01
RNF220-212ENST00000475378 DUSP28Q4G0W2 176 aa21.37■■□□□ 1.01
RNF220-212ENST00000475378 MUM1L1Q5H9M0 696 aa21.37■■□□□ 1.01
RNF220-212ENST00000475378 FAM160B2Q86V87 743 aa21.37■■□□□ 1.01
RNF220-212ENST00000475378 STAG1Q8WVM7 1258 aa21.37■■□□□ 1.01
RNF220-212ENST00000475378 OSBP2Q969R2 916 aa21.37■■□□□ 1.01
RNF220-212ENST00000475378 ALAS1P13196 640 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms