RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 TEX13BQ9BXU2 312 aa16.92■□□□□ 0.3
ATG9A-220ENST00000475339 FTOQ9C0B1 505 aaKnown RBP eCLIP16.92■□□□□ 0.3
ATG9A-220ENST00000475339 ZBTB40Q9NUA8 1239 aa16.92■□□□□ 0.3
ATG9A-220ENST00000475339 TECTAO75443 2155 aa16.92■□□□□ 0.3
ATG9A-220ENST00000475339 IGSF3O75054 1194 aa16.91■□□□□ 0.3
ATG9A-220ENST00000475339 AKR1B1P15121 316 aa16.91■□□□□ 0.3
ATG9A-220ENST00000475339 NEK9Q8TD19 979 aa16.91■□□□□ 0.3
ATG9A-220ENST00000475339 MCM9Q9NXL9 1143 aa16.91■□□□□ 0.3
ATG9A-220ENST00000475339 GNEQ9Y223 722 aaKnown RBP16.91■□□□□ 0.3
ATG9A-220ENST00000475339 C5orf42Q9H799 3197 aa16.91■□□□□ 0.3
ATG9A-220ENST00000475339 C19orf67A6NJJ6 358 aa16.9■□□□□ 0.3
ATG9A-220ENST00000475339 DYNC1LI2O43237 492 aaPredicted RBP16.9■□□□□ 0.3
ATG9A-220ENST00000475339 TCF15Q12870 199 aa16.9■□□□□ 0.3
ATG9A-220ENST00000475339 FAM83BQ5T0W9 1011 aa16.9■□□□□ 0.3
ATG9A-220ENST00000475339 RPAP2Q8IXW5 612 aaPredicted RBP16.9■□□□□ 0.3
ATG9A-220ENST00000475339 AP5M1Q9H0R1 490 aa16.9■□□□□ 0.3
ATG9A-220ENST00000475339 FAM86C1Q9NVL1 165 aa16.9■□□□□ 0.3
ATG9A-220ENST00000475339 TNKSO95271 1327 aa16.9■□□□□ 0.3
ATG9A-220ENST00000475339 RAD21O60216 631 aa16.89■□□□□ 0.29
ATG9A-220ENST00000475339 ZEB2O60315 1214 aa16.89■□□□□ 0.29
ATG9A-220ENST00000475339 IQCF3P0C7M6 154 aa16.89■□□□□ 0.29
ATG9A-220ENST00000475339 SUPT20HL2P0C7V6 817 aa16.89■□□□□ 0.29
ATG9A-220ENST00000475339 CYP2D6P10635 497 aa16.89■□□□□ 0.29
ATG9A-220ENST00000475339 RFC2P35250 354 aa16.89■□□□□ 0.29
ATG9A-220ENST00000475339 IRS1P35568 1242 aa16.89■□□□□ 0.29
ATG9A-220ENST00000475339 CPXCR1Q8N123 301 aa16.89■□□□□ 0.29
ATG9A-220ENST00000475339 ANKRD35Q8N283 1001 aa16.89■□□□□ 0.29
ATG9A-220ENST00000475339 TET1Q8NFU7 2136 aa16.89■□□□□ 0.29
ATG9A-220ENST00000475339 DYNLL2Q96FJ2 89 aa16.89■□□□□ 0.29
ATG9A-220ENST00000475339 RIOK1Q9BRS2 568 aaKnown RBP16.89■□□□□ 0.29
ATG9A-220ENST00000475339 ZBED2Q9BTP6 218 aa16.89■□□□□ 0.29
ATG9A-220ENST00000475339 MUTYHQ9UIF7 546 aa16.89■□□□□ 0.29
ATG9A-220ENST00000475339 RIF1Q5UIP0 2472 aaKnown RBP16.89■□□□□ 0.29
ATG9A-220ENST00000475339 EEF2P13639 858 aaKnown RBP16.88■□□□□ 0.29
ATG9A-220ENST00000475339 SMPD1P17405 629 aa16.88■□□□□ 0.29
ATG9A-220ENST00000475339 ERVK-21P61565 698 aa16.88■□□□□ 0.29
ATG9A-220ENST00000475339 HSP90AB4PQ58FF6 505 aa16.88■□□□□ 0.29
ATG9A-220ENST00000475339 ERC1Q8IUD2 1116 aa16.88■□□□□ 0.29
ATG9A-220ENST00000475339 ZNF512BQ96KM6 892 aaPredicted RBP16.88■□□□□ 0.29
ATG9A-220ENST00000475339 PRKAG3Q9UGI9 489 aa16.88■□□□□ 0.29
ATG9A-220ENST00000475339 NOP58Q9Y2X3 529 aaKnown RBP16.88■□□□□ 0.29
ATG9A-220ENST00000475339 KCNJ6P48051 423 aa16.87■□□□□ 0.29
ATG9A-220ENST00000475339 TNNI3KQ59H18 835 aa16.87■□□□□ 0.29
ATG9A-220ENST00000475339 TMEM63BQ5T3F8 832 aa16.87■□□□□ 0.29
ATG9A-220ENST00000475339 ADHFE1Q8IWW8 467 aa16.87■□□□□ 0.29
ATG9A-220ENST00000475339 TGS1Q96RS0 853 aaKnown RBP16.87■□□□□ 0.29
ATG9A-220ENST00000475339 NUP88Q99567 741 aaPredicted RBP16.87■□□□□ 0.29
ATG9A-220ENST00000475339 SLF1Q9BQI6 1058 aa16.87■□□□□ 0.29
ATG9A-220ENST00000475339 UPF3BQ9BZI7 483 aaKnown RBP16.87■□□□□ 0.29
ATG9A-220ENST00000475339 EXOC6BQ9Y2D4 811 aa16.87■□□□□ 0.29
ATG9A-220ENST00000475339 FPGT-TNNI3KV9GXZ4 949 aa16.87■□□□□ 0.29
ATG9A-220ENST00000475339 CACNA1BQ00975 2339 aa16.86■□□□□ 0.29
ATG9A-220ENST00000475339 BAIAP3O94812 1187 aa16.86■□□□□ 0.29
ATG9A-220ENST00000475339 WDR5P61964 334 aaKnown RBP16.86■□□□□ 0.29
ATG9A-220ENST00000475339 CNTN2Q02246 1040 aa16.86■□□□□ 0.29
ATG9A-220ENST00000475339 EP400NLQ6ZTU2 488 aa16.86■□□□□ 0.29
ATG9A-220ENST00000475339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.86■□□□□ 0.29
ATG9A-220ENST00000475339 ANTXR1Q9H6X2 564 aa16.86■□□□□ 0.29
ATG9A-220ENST00000475339 GOPCQ9HD26 462 aa16.86■□□□□ 0.29
ATG9A-220ENST00000475339 SWAP70Q9UH65 585 aa16.86■□□□□ 0.29
ATG9A-220ENST00000475339 DDX49Q9Y6V7 483 aaKnown RBP16.86■□□□□ 0.29
ATG9A-220ENST00000475339 LINC01553A4QN01 128 aa16.85■□□□□ 0.29
ATG9A-220ENST00000475339 DEFB103AP81534 67 aa16.85■□□□□ 0.29
ATG9A-220ENST00000475339 HERC4Q5GLZ8 1057 aaPredicted RBP16.85■□□□□ 0.29
ATG9A-220ENST00000475339 RETREG2Q8NC44 543 aa16.85■□□□□ 0.29
ATG9A-220ENST00000475339 PPP1R13LQ8WUF5 828 aa16.85■□□□□ 0.29
ATG9A-220ENST00000475339 SDR42E1Q8WUS8 393 aa16.85■□□□□ 0.29
ATG9A-220ENST00000475339 PRRX2Q99811 253 aa16.85■□□□□ 0.29
ATG9A-220ENST00000475339 RAVER2Q9HCJ3 691 aaKnown RBP16.85■□□□□ 0.29
ATG9A-220ENST00000475339 GPR108Q9NPR9 543 aa16.85■□□□□ 0.29
ATG9A-220ENST00000475339 PDGFCQ9NRA1 345 aa16.85■□□□□ 0.29
ATG9A-220ENST00000475339 FAM50BQ9Y247 325 aa16.85■□□□□ 0.29
ATG9A-220ENST00000475339 PTPRSQ13332 1948 aa16.84■□□□□ 0.29
ATG9A-220ENST00000475339 MYO15AQ9UKN7 3530 aa16.84■□□□□ 0.29
ATG9A-220ENST00000475339 MAGEB6P1A0A0J9YX57 407 aa16.84■□□□□ 0.29
ATG9A-220ENST00000475339 PITPNM1O00562 1244 aa16.84■□□□□ 0.29
ATG9A-220ENST00000475339 ATP2A1O14983 1001 aa16.84■□□□□ 0.29
ATG9A-220ENST00000475339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.84■□□□□ 0.29
ATG9A-220ENST00000475339 BMP8AQ7Z5Y6 402 aa16.84■□□□□ 0.29
ATG9A-220ENST00000475339 PBXIP1Q96AQ6 731 aa16.84■□□□□ 0.29
ATG9A-220ENST00000475339 CRNKL1Q9BZJ0 848 aaKnown RBP16.84■□□□□ 0.29
ATG9A-220ENST00000475339 DCP1AQ9NPI6 582 aaPredicted RBP16.84■□□□□ 0.29
ATG9A-220ENST00000475339 DCHS1Q96JQ0 3298 aa16.83■□□□□ 0.29
ATG9A-220ENST00000475339 FAM186AA6NE01 2351 aa16.83■□□□□ 0.28
ATG9A-220ENST00000475339 FAM47CQ5HY64 1035 aa16.83■□□□□ 0.28
ATG9A-220ENST00000475339 EEPD1Q7L9B9 569 aa16.83■□□□□ 0.28
ATG9A-220ENST00000475339 RNF135Q8IUD6 432 aa16.83■□□□□ 0.28
ATG9A-220ENST00000475339 SIRT2Q8IXJ6 389 aa16.83■□□□□ 0.28
ATG9A-220ENST00000475339 FAM133AQ8N9E0 248 aa16.83■□□□□ 0.28
ATG9A-220ENST00000475339 NAV1Q8NEY1 1877 aa16.83■□□□□ 0.28
ATG9A-220ENST00000475339 EDAQ92838 391 aa16.83■□□□□ 0.28
ATG9A-220ENST00000475339 CCDC17Q96LX7 622 aa16.83■□□□□ 0.28
ATG9A-220ENST00000475339 CRBNQ96SW2 442 aa16.83■□□□□ 0.28
ATG9A-220ENST00000475339 RAD9AQ99638 391 aa16.83■□□□□ 0.28
ATG9A-220ENST00000475339 KANSL2Q9H9L4 492 aa16.83■□□□□ 0.28
ATG9A-220ENST00000475339 CACNA1GO43497 2377 aa16.82■□□□□ 0.28
ATG9A-220ENST00000475339 SOWAHBA6NEL2 793 aa16.82■□□□□ 0.28
ATG9A-220ENST00000475339 GJB5O95377 273 aa16.82■□□□□ 0.28
ATG9A-220ENST00000475339 ERMP1Q7Z2K6 904 aa16.82■□□□□ 0.28
ATG9A-220ENST00000475339 PRPF38AQ8NAV1 312 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms