RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 LRRFIP1Q32MZ4 808 aaKnown RBP15□□□□□ -0.01
SKA3-206ENST00000475251 SLFN13Q68D06 897 aa15□□□□□ -0.01
SKA3-206ENST00000475251 CXCL17Q6UXB2 119 aa15□□□□□ -0.01
SKA3-206ENST00000475251 APPBP2Q92624 585 aa15□□□□□ -0.01
SKA3-206ENST00000475251 CEP95Q96GE4 821 aa15□□□□□ -0.01
SKA3-206ENST00000475251 GPATCH3Q96I76 525 aa15□□□□□ -0.01
SKA3-206ENST00000475251 ECHDC1Q9NTX5 307 aa15□□□□□ -0.01
SKA3-206ENST00000475251 CXXC1Q9P0U4 656 aaPredicted RBP15□□□□□ -0.01
SKA3-206ENST00000475251 ISY1Q9ULR0 285 aaKnown RBP15□□□□□ -0.01
SKA3-206ENST00000475251 GNEQ9Y223 722 aaKnown RBP15□□□□□ -0.01
SKA3-206ENST00000475251 Q9Y3F1 56 aa15□□□□□ -0.01
SKA3-206ENST00000475251 SLC4A7Q9Y6M7 1214 aa15□□□□□ -0.01
SKA3-206ENST00000475251 MUC3AQ02505 3323 aa15□□□□□ -0.01
SKA3-206ENST00000475251 PLIN4Q96Q06 1357 aa14.99□□□□□ -0.01
SKA3-206ENST00000475251 APPP05067 770 aa14.99□□□□□ -0.01
SKA3-206ENST00000475251 PFKMP08237 780 aa14.99□□□□□ -0.01
SKA3-206ENST00000475251 TSPY3P0CV98 308 aa14.99□□□□□ -0.01
SKA3-206ENST00000475251 TSPY8P0CW00 308 aa14.99□□□□□ -0.01
SKA3-206ENST00000475251 CNTN2Q02246 1040 aa14.99□□□□□ -0.01
SKA3-206ENST00000475251 PDE4BQ07343 736 aa14.99□□□□□ -0.01
SKA3-206ENST00000475251 IKQ13123 557 aaPredicted RBP14.99□□□□□ -0.01
SKA3-206ENST00000475251 PPP2R2DQ66LE6 453 aa14.99□□□□□ -0.01
SKA3-206ENST00000475251 OTOP2Q7RTS6 562 aa14.99□□□□□ -0.01
SKA3-206ENST00000475251 LRRC47Q8N1G4 583 aaKnown RBP14.99□□□□□ -0.01
SKA3-206ENST00000475251 KBTBD3Q8NAB2 608 aa14.99□□□□□ -0.01
SKA3-206ENST00000475251 NACAP1Q9BZK3 213 aa14.99□□□□□ -0.01
SKA3-206ENST00000475251 A1CFQ9NQ94 594 aaKnown RBP14.99□□□□□ -0.01
SKA3-206ENST00000475251 RNF146Q9NTX7 359 aa14.99□□□□□ -0.01
SKA3-206ENST00000475251 PCDHA11Q9Y5I1 949 aa14.99□□□□□ -0.01
SKA3-206ENST00000475251 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.98□□□□□ -0.01
SKA3-206ENST00000475251 TMEM232C9JQI7 657 aa14.98□□□□□ -0.01
SKA3-206ENST00000475251 SUPT20HL2P0C7V6 817 aa14.98□□□□□ -0.01
SKA3-206ENST00000475251 IQSEC1Q6DN90 963 aa14.98□□□□□ -0.01
SKA3-206ENST00000475251 STAG1Q8WVM7 1258 aa14.98□□□□□ -0.01
SKA3-206ENST00000475251 GMCL1Q96IK5 515 aa14.98□□□□□ -0.01
SKA3-206ENST00000475251 NOC4LQ9BVI4 516 aaKnown RBP14.98□□□□□ -0.01
SKA3-206ENST00000475251 C1QTNF1Q9BXJ1 281 aa14.98□□□□□ -0.01
SKA3-206ENST00000475251 YBX2Q9Y2T7 364 aaKnown RBP14.98□□□□□ -0.01
SKA3-206ENST00000475251 ZBBXA8MT70 800 aa14.97□□□□□ -0.01
SKA3-206ENST00000475251 RNF113AO15541 343 aaKnown RBP14.97□□□□□ -0.01
SKA3-206ENST00000475251 DYNC1LI2O43237 492 aaPredicted RBP14.97□□□□□ -0.01
SKA3-206ENST00000475251 GPAA1O43292 621 aa14.97□□□□□ -0.01
SKA3-206ENST00000475251 PLA2G6O60733 806 aa14.97□□□□□ -0.01
SKA3-206ENST00000475251 PRDM1O75626 825 aa14.97□□□□□ -0.01
SKA3-206ENST00000475251 SLC1A4P43007 532 aa14.97□□□□□ -0.01
SKA3-206ENST00000475251 CCL23P55773 120 aa14.97□□□□□ -0.01
SKA3-206ENST00000475251 NEDD1Q8NHV4 660 aa14.97□□□□□ -0.01
SKA3-206ENST00000475251 OSBP2Q969R2 916 aa14.97□□□□□ -0.01
SKA3-206ENST00000475251 TRERF1Q96PN7 1200 aa14.97□□□□□ -0.01
SKA3-206ENST00000475251 VTA1Q9NP79 307 aa14.97□□□□□ -0.01
SKA3-206ENST00000475251 GBF1Q92538 1859 aa14.97□□□□□ -0.01
SKA3-206ENST00000475251 ASTN1O14525 1302 aa14.96□□□□□ -0.01
SKA3-206ENST00000475251 UMODL1Q5DID0 1318 aa14.96□□□□□ -0.01
SKA3-206ENST00000475251 SOWAHBA6NEL2 793 aa14.96□□□□□ -0.01
SKA3-206ENST00000475251 PATL2C9JE40 543 aaKnown RBP14.96□□□□□ -0.01
SKA3-206ENST00000475251 GTPBP6O43824 516 aaPredicted RBP14.96□□□□□ -0.01
SKA3-206ENST00000475251 B4GALT4O60513 344 aa14.96□□□□□ -0.01
SKA3-206ENST00000475251 ACTN1P12814 892 aa14.96□□□□□ -0.01
SKA3-206ENST00000475251 ALAS1P13196 640 aa14.96□□□□□ -0.01
SKA3-206ENST00000475251 ATP2A2P16615 1042 aaKnown RBP14.96□□□□□ -0.01
SKA3-206ENST00000475251 SMPD1P17405 629 aa14.96□□□□□ -0.01
SKA3-206ENST00000475251 PLA2G5P39877 138 aa14.96□□□□□ -0.01
SKA3-206ENST00000475251 FAM122AQ96E09 287 aa14.96□□□□□ -0.01
SKA3-206ENST00000475251 EPB41L4AQ9HCS5 686 aaPredicted RBP14.96□□□□□ -0.01
SKA3-206ENST00000475251 SSUH2Q9Y2M2 353 aa14.96□□□□□ -0.01
SKA3-206ENST00000475251 LRRC37A2A6NM11 1700 aa14.95□□□□□ -0.02
SKA3-206ENST00000475251 LOC102724159A0A0B4J2E5 919 aa14.95□□□□□ -0.02
SKA3-206ENST00000475251 PWP2Q15269 919 aaKnown RBP14.95□□□□□ -0.02
SKA3-206ENST00000475251 SKIV2LQ15477 1246 aaKnown RBP14.95□□□□□ -0.02
SKA3-206ENST00000475251 TMEM67Q5HYA8 995 aa14.95□□□□□ -0.02
SKA3-206ENST00000475251 IFNL3Q8IZI9 196 aa14.95□□□□□ -0.02
SKA3-206ENST00000475251 MICALL1Q8N3F8 863 aa14.95□□□□□ -0.02
SKA3-206ENST00000475251 AGBL1Q96MI9 1066 aa14.95□□□□□ -0.02
SKA3-206ENST00000475251 TRPV6Q9H1D0 765 aa14.95□□□□□ -0.02
SKA3-206ENST00000475251 WNT8AQ9H1J5 351 aa14.95□□□□□ -0.02
SKA3-206ENST00000475251 ALDH8A1Q9H2A2 487 aaPredicted RBP14.95□□□□□ -0.02
SKA3-206ENST00000475251 POLR3EQ9NVU0 708 aa14.95□□□□□ -0.02
SKA3-206ENST00000475251 ADD3Q9UEY8 706 aaKnown RBP14.95□□□□□ -0.02
SKA3-206ENST00000475251 ZNF536O15090 1300 aa14.94□□□□□ -0.02
SKA3-206ENST00000475251 GRIN2DO15399 1336 aa14.94□□□□□ -0.02
SKA3-206ENST00000475251 RFC2P35250 354 aa14.94□□□□□ -0.02
SKA3-206ENST00000475251 CPT1AP50416 773 aa14.94□□□□□ -0.02
SKA3-206ENST00000475251 RABGGTBP53611 331 aa14.94□□□□□ -0.02
SKA3-206ENST00000475251 TFAP4Q01664 338 aa14.94□□□□□ -0.02
SKA3-206ENST00000475251 BRDTQ58F21 947 aaPredicted RBP14.94□□□□□ -0.02
SKA3-206ENST00000475251 TAPT1Q6NXT6 567 aa14.94□□□□□ -0.02
SKA3-206ENST00000475251 KIAA1211Q6ZU35 1233 aa14.94□□□□□ -0.02
SKA3-206ENST00000475251 FBXO16Q8IX29 292 aaPredicted RBP14.94□□□□□ -0.02
SKA3-206ENST00000475251 NAPBQ9H115 298 aa14.94□□□□□ -0.02
SKA3-206ENST00000475251 GPHNQ9NQX3 736 aaPredicted RBP14.94□□□□□ -0.02
SKA3-206ENST00000475251 CYP39A1Q9NYL5 469 aa14.94□□□□□ -0.02
SKA3-206ENST00000475251 MYO9BQ13459 2157 aa14.94□□□□□ -0.02
SKA3-206ENST00000475251 PITPNM1O00562 1244 aa14.93□□□□□ -0.02
SKA3-206ENST00000475251 ERC2O15083 957 aa14.93□□□□□ -0.02
SKA3-206ENST00000475251 SMARCA5O60264 1052 aaPredicted RBP14.93□□□□□ -0.02
SKA3-206ENST00000475251 BMP1P13497 986 aa14.93□□□□□ -0.02
SKA3-206ENST00000475251 POU3F3P20264 500 aaPredicted RBP14.93□□□□□ -0.02
SKA3-206ENST00000475251 MCCP23508 829 aa14.93□□□□□ -0.02
SKA3-206ENST00000475251 PSMC6P62333 389 aa14.93□□□□□ -0.02
SKA3-206ENST00000475251 DUSP28Q4G0W2 176 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms