RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 DEFB129Q9H1M3 183 aa11.64□□□□□ -0.55
PCCB-213ENST00000475214 HPSEQ9Y251 543 aa11.64□□□□□ -0.55
PCCB-213ENST00000475214 PPP2R3BQ9Y5P8 575 aa11.64□□□□□ -0.55
PCCB-213ENST00000475214 CTNND1O60716 968 aaKnown RBP11.63□□□□□ -0.55
PCCB-213ENST00000475214 MCM7P33993 719 aa11.63□□□□□ -0.55
PCCB-213ENST00000475214 HUNKP57058 714 aa11.63□□□□□ -0.55
PCCB-213ENST00000475214 ATP2C1P98194 919 aaPredicted RBP11.63□□□□□ -0.55
PCCB-213ENST00000475214 TYRO3Q06418 890 aa11.63□□□□□ -0.55
PCCB-213ENST00000475214 PTGDRQ13258 359 aa11.63□□□□□ -0.55
PCCB-213ENST00000475214 QRICH1Q2TAL8 776 aa11.63□□□□□ -0.55
PCCB-213ENST00000475214 UVSSAQ2YD98 709 aa11.63□□□□□ -0.55
PCCB-213ENST00000475214 ANGEL2Q5VTE6 544 aaKnown RBP11.63□□□□□ -0.55
PCCB-213ENST00000475214 ACER1Q8TDN7 264 aa11.63□□□□□ -0.55
PCCB-213ENST00000475214 CHURC1Q8WUH1 139 aa11.63□□□□□ -0.55
PCCB-213ENST00000475214 CUL5Q93034 780 aa11.63□□□□□ -0.55
PCCB-213ENST00000475214 CCDC102AQ96A19 550 aa11.63□□□□□ -0.55
PCCB-213ENST00000475214 NUP88Q99567 741 aaPredicted RBP11.63□□□□□ -0.55
PCCB-213ENST00000475214 ZNF341Q9BYN7 854 aa11.63□□□□□ -0.55
PCCB-213ENST00000475214 VCPKMTQ9H867 229 aa11.63□□□□□ -0.55
PCCB-213ENST00000475214 GBA2Q9HCG7 927 aaPredicted RBP11.63□□□□□ -0.55
PCCB-213ENST00000475214 RIC8AQ9NPQ8 531 aa11.63□□□□□ -0.55
PCCB-213ENST00000475214 BIN2Q9UBW5 565 aaPredicted RBP11.63□□□□□ -0.55
PCCB-213ENST00000475214 KCNH3Q9ULD8 1083 aa11.63□□□□□ -0.55
PCCB-213ENST00000475214 SCAF8Q9UPN6 1271 aaKnown RBP11.63□□□□□ -0.55
PCCB-213ENST00000475214 ASTN2O75129 1339 aaPredicted RBP11.62□□□□□ -0.55
PCCB-213ENST00000475214 PITPNM2Q9BZ72 1349 aa11.62□□□□□ -0.55
PCCB-213ENST00000475214 PHF20L1A8MW92 1017 aa11.62□□□□□ -0.55
PCCB-213ENST00000475214 LAD1O00515 517 aa11.62□□□□□ -0.55
PCCB-213ENST00000475214 ADAMTS3O15072 1205 aa11.62□□□□□ -0.55
PCCB-213ENST00000475214 SLC34A2O95436 690 aa11.62□□□□□ -0.55
PCCB-213ENST00000475214 CAVIN2O95810 425 aa11.62□□□□□ -0.55
PCCB-213ENST00000475214 STAT2P52630 851 aa11.62□□□□□ -0.55
PCCB-213ENST00000475214 ORC2Q13416 577 aaPredicted RBP11.62□□□□□ -0.55
PCCB-213ENST00000475214 ZRSR1Q15695 479 aaKnown RBP11.62□□□□□ -0.55
PCCB-213ENST00000475214 INF2Q27J81 1249 aa11.62□□□□□ -0.55
PCCB-213ENST00000475214 JAKMIP3Q5VZ66 844 aa11.62□□□□□ -0.55
PCCB-213ENST00000475214 ARL6IP4Q66PJ3 421 aaKnown RBP11.62□□□□□ -0.55
PCCB-213ENST00000475214 MCTP2Q6DN12 878 aa11.62□□□□□ -0.55
PCCB-213ENST00000475214 FAM160B2Q86V87 743 aa11.62□□□□□ -0.55
PCCB-213ENST00000475214 FBXO11Q86XK2 927 aa11.62□□□□□ -0.55
PCCB-213ENST00000475214 RNF214Q8ND24 703 aa11.62□□□□□ -0.55
PCCB-213ENST00000475214 CCDC34Q96HJ3 373 aa11.62□□□□□ -0.55
PCCB-213ENST00000475214 AMNQ9BXJ7 453 aa11.62□□□□□ -0.55
PCCB-213ENST00000475214 CSRNP2Q9H175 543 aa11.62□□□□□ -0.55
PCCB-213ENST00000475214 GGA3Q9NZ52 723 aa11.62□□□□□ -0.55
PCCB-213ENST00000475214 HOOK1Q9UJC3 728 aaKnown RBP11.62□□□□□ -0.55
PCCB-213ENST00000475214 ATAD5Q96QE3 1844 aa11.62□□□□□ -0.55
PCCB-213ENST00000475214 PLA2G6O60733 806 aa11.61□□□□□ -0.55
PCCB-213ENST00000475214 PPP1R11O60927 126 aaPredicted RBP11.61□□□□□ -0.55
PCCB-213ENST00000475214 RGS19P49795 217 aa11.61□□□□□ -0.55
PCCB-213ENST00000475214 FKBP1BP68106 108 aa11.61□□□□□ -0.55
PCCB-213ENST00000475214 GRIN1Q05586 938 aa11.61□□□□□ -0.55
PCCB-213ENST00000475214 STX1AQ16623 288 aa11.61□□□□□ -0.55
PCCB-213ENST00000475214 SPECC1Q5M775 1068 aa11.61□□□□□ -0.55
PCCB-213ENST00000475214 NBPF12Q5TAG4 269 aaPredicted RBP11.61□□□□□ -0.55
PCCB-213ENST00000475214 RGMBQ6NW40 437 aa11.61□□□□□ -0.55
PCCB-213ENST00000475214 KANK3Q6NY19 840 aa11.61□□□□□ -0.55
PCCB-213ENST00000475214 NEK8Q86SG6 692 aa11.61□□□□□ -0.55
PCCB-213ENST00000475214 ELOA2Q8IYF1 753 aaPredicted RBP11.61□□□□□ -0.55
PCCB-213ENST00000475214 REM2Q8IYK8 340 aaPredicted RBP11.61□□□□□ -0.55
PCCB-213ENST00000475214 SPICE1Q8N0Z3 855 aa11.61□□□□□ -0.55
PCCB-213ENST00000475214 CNNM3Q8NE01 707 aa11.61□□□□□ -0.55
PCCB-213ENST00000475214 TBCKQ8TEA7 893 aa11.61□□□□□ -0.55
PCCB-213ENST00000475214 FEZ1Q99689 392 aa11.61□□□□□ -0.55
PCCB-213ENST00000475214 PYM1Q9BRP8 204 aaKnown RBP11.61□□□□□ -0.55
PCCB-213ENST00000475214 PSTPIP2Q9H939 334 aa11.61□□□□□ -0.55
PCCB-213ENST00000475214 PCDHA1Q9Y5I3 950 aa11.61□□□□□ -0.55
PCCB-213ENST00000475214 VWA3AA6NCI4 1184 aa11.6□□□□□ -0.55
PCCB-213ENST00000475214 WNT7AO00755 349 aa11.6□□□□□ -0.55
PCCB-213ENST00000475214 CCNT1O60563 726 aaKnown RBP11.6□□□□□ -0.55
PCCB-213ENST00000475214 AOC2O75106 756 aa11.6□□□□□ -0.55
PCCB-213ENST00000475214 NF2P35240 595 aa11.6□□□□□ -0.55
PCCB-213ENST00000475214 LONP1P36776 959 aaKnown RBP11.6□□□□□ -0.55
PCCB-213ENST00000475214 ZYXQ15942 572 aaKnown RBP11.6□□□□□ -0.55
PCCB-213ENST00000475214 LETM2Q2VYF4 491 aa11.6□□□□□ -0.55
PCCB-213ENST00000475214 SUPT20HL1Q3ZLR7 823 aa11.6□□□□□ -0.55
PCCB-213ENST00000475214 FAM83BQ5T0W9 1011 aa11.6□□□□□ -0.55
PCCB-213ENST00000475214 DTHD1Q6ZMT9 781 aa11.6□□□□□ -0.55
PCCB-213ENST00000475214 KRBA2Q6ZNG9 492 aa11.6□□□□□ -0.55
PCCB-213ENST00000475214 NAP1L4Q99733 375 aaKnown RBP11.6□□□□□ -0.55
PCCB-213ENST00000475214 PANK2Q9BZ23 570 aa11.6□□□□□ -0.55
PCCB-213ENST00000475214 AS3MTQ9HBK9 375 aa11.6□□□□□ -0.55
PCCB-213ENST00000475214 ANO10Q9NW15 660 aa11.6□□□□□ -0.55
PCCB-213ENST00000475214 TMEM260Q9NX78 707 aa11.6□□□□□ -0.55
PCCB-213ENST00000475214 KIAA1468Q9P260 1216 aa11.6□□□□□ -0.55
PCCB-213ENST00000475214 USP25Q9UHP3 1055 aa11.6□□□□□ -0.55
PCCB-213ENST00000475214 FEM1BQ9UK73 627 aa11.6□□□□□ -0.55
PCCB-213ENST00000475214 PRR12Q9ULL5 1215 aa11.6□□□□□ -0.55
PCCB-213ENST00000475214 MRVI1Q9Y6F6 885 aa11.6□□□□□ -0.55
PCCB-213ENST00000475214 CCDC85CA6NKD9 419 aa11.59□□□□□ -0.55
PCCB-213ENST00000475214 ADM5C9JUS6 153 aa11.59□□□□□ -0.55
PCCB-213ENST00000475214 POLR2DO15514 142 aaKnown RBP11.59□□□□□ -0.55
PCCB-213ENST00000475214 TXLNAP40222 546 aa11.59□□□□□ -0.55
PCCB-213ENST00000475214 PRPHP41219 470 aa11.59□□□□□ -0.55
PCCB-213ENST00000475214 CLK2P49760 499 aaKnown RBP11.59□□□□□ -0.55
PCCB-213ENST00000475214 ZNF157P51786 506 aaPredicted RBP11.59□□□□□ -0.55
PCCB-213ENST00000475214 USP14P54578 494 aa11.59□□□□□ -0.55
PCCB-213ENST00000475214 MLLT1Q03111 559 aaPredicted RBP11.59□□□□□ -0.55
PCCB-213ENST00000475214 CCDC173Q0VFZ6 552 aa11.59□□□□□ -0.55
PCCB-213ENST00000475214 ANO6Q4KMQ2 910 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms