RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 TRPV6Q9H1D0 765 aa18.98■□□□□ 0.63
ITGB1-211ENST00000475184 PCDHA11Q9Y5I1 949 aa18.98■□□□□ 0.63
ITGB1-211ENST00000475184 ASB14A6NK59 587 aa18.97■□□□□ 0.63
ITGB1-211ENST00000475184 FDX1P10109 184 aa18.97■□□□□ 0.63
ITGB1-211ENST00000475184 BMP1P13497 986 aa18.97■□□□□ 0.63
ITGB1-211ENST00000475184 TFF2Q03403 129 aa18.97■□□□□ 0.63
ITGB1-211ENST00000475184 AAK1Q2M2I8 961 aa18.97■□□□□ 0.63
ITGB1-211ENST00000475184 RPUSD2Q8IZ73 545 aaKnown RBP18.97■□□□□ 0.63
ITGB1-211ENST00000475184 C1QTNF1Q9BXJ1 281 aa18.97■□□□□ 0.63
ITGB1-211ENST00000475184 A1CFQ9NQ94 594 aaKnown RBP18.97■□□□□ 0.63
ITGB1-211ENST00000475184 MTMR4Q9NYA4 1195 aa18.97■□□□□ 0.63
ITGB1-211ENST00000475184 TANC1Q9C0D5 1861 aa18.97■□□□□ 0.63
ITGB1-211ENST00000475184 SOWAHBA6NEL2 793 aa18.96■□□□□ 0.63
ITGB1-211ENST00000475184 ZBBXA8MT70 800 aa18.96■□□□□ 0.63
ITGB1-211ENST00000475184 ZEB2O60315 1214 aa18.96■□□□□ 0.63
ITGB1-211ENST00000475184 TTLL1O95922 423 aa18.96■□□□□ 0.63
ITGB1-211ENST00000475184 BMP3P12645 472 aa18.96■□□□□ 0.63
ITGB1-211ENST00000475184 SMPD1P17405 629 aa18.96■□□□□ 0.63
ITGB1-211ENST00000475184 PTGS1P23219 599 aa18.96■□□□□ 0.63
ITGB1-211ENST00000475184 ZNF444Q8N0Y2 327 aaPredicted RBP18.96■□□□□ 0.63
ITGB1-211ENST00000475184 TET1Q8NFU7 2136 aa18.96■□□□□ 0.63
ITGB1-211ENST00000475184 ZNF287Q9HBT7 754 aa18.96■□□□□ 0.63
ITGB1-211ENST00000475184 RNF146Q9NTX7 359 aa18.96■□□□□ 0.63
ITGB1-211ENST00000475184 COG6Q9Y2V7 657 aa18.96■□□□□ 0.63
ITGB1-211ENST00000475184 TRIP12Q14669 1992 aaPredicted RBP18.95■□□□□ 0.62
ITGB1-211ENST00000475184 SCN10AQ9Y5Y9 1956 aa18.95■□□□□ 0.62
ITGB1-211ENST00000475184 DYNC1LI2O43237 492 aaPredicted RBP18.95■□□□□ 0.62
ITGB1-211ENST00000475184 PRDM1O75626 825 aa18.95■□□□□ 0.62
ITGB1-211ENST00000475184 ATP2A2P16615 1042 aaKnown RBP18.95■□□□□ 0.62
ITGB1-211ENST00000475184 SKIV2LQ15477 1246 aaKnown RBP18.95■□□□□ 0.62
ITGB1-211ENST00000475184 SLFN13Q68D06 897 aa18.95■□□□□ 0.62
ITGB1-211ENST00000475184 VWCEQ96DN2 955 aa18.95■□□□□ 0.62
ITGB1-211ENST00000475184 SCLYQ96I15 445 aa18.95■□□□□ 0.62
ITGB1-211ENST00000475184 ZBTB40Q9NUA8 1239 aa18.95■□□□□ 0.62
ITGB1-211ENST00000475184 ISY1Q9ULR0 285 aaKnown RBP18.95■□□□□ 0.62
ITGB1-211ENST00000475184 PLIN4Q96Q06 1357 aa18.94■□□□□ 0.62
ITGB1-211ENST00000475184 MUC6Q6W4X9 2439 aa18.94■□□□□ 0.62
ITGB1-211ENST00000475184 TMEM232C9JQI7 657 aa18.94■□□□□ 0.62
ITGB1-211ENST00000475184 KCNQ1P51787 676 aa18.94■□□□□ 0.62
ITGB1-211ENST00000475184 STAT2P52630 851 aa18.94■□□□□ 0.62
ITGB1-211ENST00000475184 PSMC6P62333 389 aa18.94■□□□□ 0.62
ITGB1-211ENST00000475184 AGBL1Q96MI9 1066 aa18.94■□□□□ 0.62
ITGB1-211ENST00000475184 EPB41L4AQ9HCS5 686 aaPredicted RBP18.94■□□□□ 0.62
ITGB1-211ENST00000475184 PDGFCQ9NRA1 345 aa18.94■□□□□ 0.62
ITGB1-211ENST00000475184 DDX49Q9Y6V7 483 aaKnown RBP18.94■□□□□ 0.62
ITGB1-211ENST00000475184 ZNF536O15090 1300 aa18.94■□□□□ 0.62
ITGB1-211ENST00000475184 ERC2O15083 957 aa18.93■□□□□ 0.62
ITGB1-211ENST00000475184 PFKMP08237 780 aa18.93■□□□□ 0.62
ITGB1-211ENST00000475184 MS4A1P11836 297 aa18.93■□□□□ 0.62
ITGB1-211ENST00000475184 TDO2P48775 406 aa18.93■□□□□ 0.62
ITGB1-211ENST00000475184 HNRNPUQ00839 825 aaKnown RBP eCLIP18.93■□□□□ 0.62
ITGB1-211ENST00000475184 TKFCQ3LXA3 575 aa18.93■□□□□ 0.62
ITGB1-211ENST00000475184 IQSEC1Q6DN90 963 aa18.93■□□□□ 0.62
ITGB1-211ENST00000475184 FBXO16Q8IX29 292 aaPredicted RBP18.93■□□□□ 0.62
ITGB1-211ENST00000475184 APPBP2Q92624 585 aa18.93■□□□□ 0.62
ITGB1-211ENST00000475184 OSBP2Q969R2 916 aa18.93■□□□□ 0.62
ITGB1-211ENST00000475184 TRERF1Q96PN7 1200 aa18.93■□□□□ 0.62
ITGB1-211ENST00000475184 ALDH8A1Q9H2A2 487 aaPredicted RBP18.93■□□□□ 0.62
ITGB1-211ENST00000475184 DDX19BQ9UMR2 479 aa18.93■□□□□ 0.62
ITGB1-211ENST00000475184 Q9Y3F1 56 aa18.93■□□□□ 0.62
ITGB1-211ENST00000475184 PTPRSQ13332 1948 aa18.92■□□□□ 0.62
ITGB1-211ENST00000475184 GTPBP6O43824 516 aaPredicted RBP18.92■□□□□ 0.62
ITGB1-211ENST00000475184 CA3P07451 260 aa18.92■□□□□ 0.62
ITGB1-211ENST00000475184 IKQ13123 557 aaPredicted RBP18.92■□□□□ 0.62
ITGB1-211ENST00000475184 TTLL4Q14679 1199 aa18.92■□□□□ 0.62
ITGB1-211ENST00000475184 TMEM67Q5HYA8 995 aa18.92■□□□□ 0.62
ITGB1-211ENST00000475184 TAPT1Q6NXT6 567 aa18.92■□□□□ 0.62
ITGB1-211ENST00000475184 EEPD1Q7L9B9 569 aa18.92■□□□□ 0.62
ITGB1-211ENST00000475184 FAM160B2Q86V87 743 aa18.92■□□□□ 0.62
ITGB1-211ENST00000475184 KBTBD3Q8NAB2 608 aa18.92■□□□□ 0.62
ITGB1-211ENST00000475184 CHURC1Q8WUH1 139 aa18.92■□□□□ 0.62
ITGB1-211ENST00000475184 MTCH2Q9Y6C9 303 aa18.92■□□□□ 0.62
ITGB1-211ENST00000475184 COL4A4P53420 1690 aaPredicted RBP18.92■□□□□ 0.62
ITGB1-211ENST00000475184 GPAA1O43292 621 aa18.91■□□□□ 0.62
ITGB1-211ENST00000475184 TSPY3P0CV98 308 aa18.91■□□□□ 0.62
ITGB1-211ENST00000475184 TSPY8P0CW00 308 aa18.91■□□□□ 0.62
ITGB1-211ENST00000475184 ALAS1P13196 640 aa18.91■□□□□ 0.62
ITGB1-211ENST00000475184 GNAT2P19087 354 aa18.91■□□□□ 0.62
ITGB1-211ENST00000475184 POU3F3P20264 500 aaPredicted RBP18.91■□□□□ 0.62
ITGB1-211ENST00000475184 TMEM63BQ5T3F8 832 aa18.91■□□□□ 0.62
ITGB1-211ENST00000475184 NEDD1Q8NHV4 660 aa18.91■□□□□ 0.62
ITGB1-211ENST00000475184 STAG1Q8WVM7 1258 aa18.91■□□□□ 0.62
ITGB1-211ENST00000475184 GMCL1Q96IK5 515 aa18.91■□□□□ 0.62
ITGB1-211ENST00000475184 LRRCC1Q9C099 1032 aa18.91■□□□□ 0.62
ITGB1-211ENST00000475184 VTA1Q9NP79 307 aa18.91■□□□□ 0.62
ITGB1-211ENST00000475184 TRMT13Q9NUP7 481 aaKnown RBP18.91■□□□□ 0.62
ITGB1-211ENST00000475184 CYP39A1Q9NYL5 469 aa18.91■□□□□ 0.62
ITGB1-211ENST00000475184 RFXAPO00287 272 aa18.9■□□□□ 0.62
ITGB1-211ENST00000475184 APPP05067 770 aa18.9■□□□□ 0.62
ITGB1-211ENST00000475184 SUPT20HL2P0C7V6 817 aa18.9■□□□□ 0.62
ITGB1-211ENST00000475184 CYP2C9P11712 490 aa18.9■□□□□ 0.62
ITGB1-211ENST00000475184 SLC1A4P43007 532 aa18.9■□□□□ 0.62
ITGB1-211ENST00000475184 DEFB128Q7Z7B8 93 aa18.9■□□□□ 0.62
ITGB1-211ENST00000475184 ECHDC1Q9NTX5 307 aa18.9■□□□□ 0.62
ITGB1-211ENST00000475184 TNKSO95271 1327 aa18.9■□□□□ 0.62
ITGB1-211ENST00000475184 SMARCA5O60264 1052 aaPredicted RBP18.89■□□□□ 0.61
ITGB1-211ENST00000475184 HOXD11P31277 338 aaPredicted RBP18.89■□□□□ 0.61
ITGB1-211ENST00000475184 MUM1L1Q5H9M0 696 aa18.89■□□□□ 0.61
ITGB1-211ENST00000475184 KIAA1211Q6ZU35 1233 aa18.89■□□□□ 0.61
ITGB1-211ENST00000475184 CHMP4CQ96CF2 233 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms