RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 A0A1W2PQ45 241 aaPredicted RBP13.9□□□□□ -0.18
CLIP2-204ENST00000474962 A0A1W2PQY0 241 aa13.9□□□□□ -0.18
CLIP2-204ENST00000474962 MYADML2A6NDP7 307 aa13.9□□□□□ -0.18
CLIP2-204ENST00000474962 POTEB2H3BUK9 544 aa13.9□□□□□ -0.18
CLIP2-204ENST00000474962 DUSP11O75319 330 aaKnown RBP13.9□□□□□ -0.18
CLIP2-204ENST00000474962 TOP1P11387 765 aaKnown RBP13.9□□□□□ -0.18
CLIP2-204ENST00000474962 ACLYP53396 1101 aa13.9□□□□□ -0.18
CLIP2-204ENST00000474962 CCDC96Q2M329 555 aa13.9□□□□□ -0.18
CLIP2-204ENST00000474962 AKNAD1Q5T1N1 836 aa13.9□□□□□ -0.18
CLIP2-204ENST00000474962 C1orf53Q5VUE5 145 aa13.9□□□□□ -0.18
CLIP2-204ENST00000474962 CCSAPQ6IQ19 270 aaPredicted RBP13.9□□□□□ -0.18
CLIP2-204ENST00000474962 Q7L0L9 218 aa13.9□□□□□ -0.18
CLIP2-204ENST00000474962 TBC1D10CQ8IV04 446 aa13.9□□□□□ -0.18
CLIP2-204ENST00000474962 FAM133AQ8N9E0 248 aa13.9□□□□□ -0.18
CLIP2-204ENST00000474962 KLHDC9Q8NEP7 349 aa13.9□□□□□ -0.18
CLIP2-204ENST00000474962 DCAF4Q8WV16 495 aa13.9□□□□□ -0.18
CLIP2-204ENST00000474962 BADQ92934 168 aa13.9□□□□□ -0.18
CLIP2-204ENST00000474962 PURBQ96QR8 312 aaKnown RBP13.9□□□□□ -0.18
CLIP2-204ENST00000474962 IL25Q9H293 177 aa13.9□□□□□ -0.18
CLIP2-204ENST00000474962 ABHD16BQ9H3Z7 469 aa13.9□□□□□ -0.18
CLIP2-204ENST00000474962 RNF41Q9H4P4 317 aaPredicted RBP13.9□□□□□ -0.18
CLIP2-204ENST00000474962 FRMPD2Q68DX3 1309 aaPredicted RBP13.9□□□□□ -0.19
CLIP2-204ENST00000474962 SYNRGQ9UMZ2 1314 aa13.9□□□□□ -0.19
CLIP2-204ENST00000474962 ITGB8P26012 769 aa13.89□□□□□ -0.19
CLIP2-204ENST00000474962 PTH1RQ03431 593 aa13.89□□□□□ -0.19
CLIP2-204ENST00000474962 MKRN4PQ13434 485 aaPredicted RBP13.89□□□□□ -0.19
CLIP2-204ENST00000474962 RNF20Q5VTR2 975 aa13.89□□□□□ -0.19
CLIP2-204ENST00000474962 DEFB123Q8N688 67 aa13.89□□□□□ -0.19
CLIP2-204ENST00000474962 MAP4K1Q92918 833 aa13.89□□□□□ -0.19
CLIP2-204ENST00000474962 ZKSCAN3Q9BRR0 538 aa13.89□□□□□ -0.19
CLIP2-204ENST00000474962 TSEN34Q9BSV6 310 aaKnown RBP13.89□□□□□ -0.19
CLIP2-204ENST00000474962 KATNBL1Q9H079 304 aa13.89□□□□□ -0.19
CLIP2-204ENST00000474962 PDLIM7Q9NR12 457 aa13.89□□□□□ -0.19
CLIP2-204ENST00000474962 PQBP1O60828 265 aaKnown RBP13.88□□□□□ -0.19
CLIP2-204ENST00000474962 C6orf222P0C671 652 aaPredicted RBP13.88□□□□□ -0.19
CLIP2-204ENST00000474962 PTGS1P23219 599 aa13.88□□□□□ -0.19
CLIP2-204ENST00000474962 TRDNQ13061 729 aa13.88□□□□□ -0.19
CLIP2-204ENST00000474962 SHHQ15465 462 aa13.88□□□□□ -0.19
CLIP2-204ENST00000474962 TKFCQ3LXA3 575 aa13.88□□□□□ -0.19
CLIP2-204ENST00000474962 GNASQ5JWF2 1037 aa13.88□□□□□ -0.19
CLIP2-204ENST00000474962 BTNL9Q6UXG8 535 aa13.88□□□□□ -0.19
CLIP2-204ENST00000474962 TTC14Q96N46 770 aa13.88□□□□□ -0.19
CLIP2-204ENST00000474962 LSG1Q9H089 658 aaKnown RBP13.88□□□□□ -0.19
CLIP2-204ENST00000474962 CYP39A1Q9NYL5 469 aa13.88□□□□□ -0.19
CLIP2-204ENST00000474962 CCPG1Q9ULG6 757 aa13.88□□□□□ -0.19
CLIP2-204ENST00000474962 RBM8AQ9Y5S9 174 aaKnown RBP13.88□□□□□ -0.19
CLIP2-204ENST00000474962 ASTN1O14525 1302 aa13.88□□□□□ -0.19
CLIP2-204ENST00000474962 EYSQ5T1H1 3165 aa13.87□□□□□ -0.19
CLIP2-204ENST00000474962 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.87□□□□□ -0.19
CLIP2-204ENST00000474962 ICAM1P05362 532 aa13.87□□□□□ -0.19
CLIP2-204ENST00000474962 PDHBP11177 359 aa13.87□□□□□ -0.19
CLIP2-204ENST00000474962 PCP11498 1178 aaKnown RBP13.87□□□□□ -0.19
CLIP2-204ENST00000474962 BAATQ14032 418 aaPredicted RBP13.87□□□□□ -0.19
CLIP2-204ENST00000474962 C9orf50Q5SZB4 431 aa13.87□□□□□ -0.19
CLIP2-204ENST00000474962 TMEM63BQ5T3F8 832 aa13.87□□□□□ -0.19
CLIP2-204ENST00000474962 SYDE2Q5VT97 1194 aa13.87□□□□□ -0.19
CLIP2-204ENST00000474962 GPR153Q6NV75 609 aa13.87□□□□□ -0.19
CLIP2-204ENST00000474962 NSMFQ6X4W1 530 aa13.87□□□□□ -0.19
CLIP2-204ENST00000474962 NOL8Q76FK4 1167 aaKnown RBP13.87□□□□□ -0.19
CLIP2-204ENST00000474962 EEPD1Q7L9B9 569 aa13.87□□□□□ -0.19
CLIP2-204ENST00000474962 VTI1AQ96AJ9 217 aa13.87□□□□□ -0.19
CLIP2-204ENST00000474962 RANBP17Q9H2T7 1088 aaKnown RBP13.87□□□□□ -0.19
CLIP2-204ENST00000474962 PDGFCQ9NRA1 345 aa13.87□□□□□ -0.19
CLIP2-204ENST00000474962 NEDD4P46934 1319 aa13.87□□□□□ -0.19
CLIP2-204ENST00000474962 PRUNE2Q8WUY3 3088 aa13.86□□□□□ -0.19
CLIP2-204ENST00000474962 CTAGE5O15320 804 aa13.86□□□□□ -0.19
CLIP2-204ENST00000474962 ASGR1P07306 291 aa13.86□□□□□ -0.19
CLIP2-204ENST00000474962 CLTBP09497 229 aa13.86□□□□□ -0.19
CLIP2-204ENST00000474962 GOLGA8HP0CJ92 632 aa13.86□□□□□ -0.19
CLIP2-204ENST00000474962 GJA9P57773 515 aa13.86□□□□□ -0.19
CLIP2-204ENST00000474962 BEX3Q00994 111 aa13.86□□□□□ -0.19
CLIP2-204ENST00000474962 TNFAIP2Q03169 654 aa13.86□□□□□ -0.19
CLIP2-204ENST00000474962 FAAP100Q0VG06 881 aa13.86□□□□□ -0.19
CLIP2-204ENST00000474962 NUP133Q8WUM0 1156 aa13.86□□□□□ -0.19
CLIP2-204ENST00000474962 ESR2Q92731 530 aa13.86□□□□□ -0.19
CLIP2-204ENST00000474962 CPVLQ9H3G5 476 aa13.86□□□□□ -0.19
CLIP2-204ENST00000474962 CNNM2Q9H8M5 875 aa13.86□□□□□ -0.19
CLIP2-204ENST00000474962 STARD7Q9NQZ5 370 aa13.86□□□□□ -0.19
CLIP2-204ENST00000474962 TMEM39AQ9NV64 488 aa13.86□□□□□ -0.19
CLIP2-204ENST00000474962 MCM3APO60318 1980 aa13.85□□□□□ -0.19
CLIP2-204ENST00000474962 UNC80Q8N2C7 3258 aa13.85□□□□□ -0.19
CLIP2-204ENST00000474962 MOXD2PA6NHM9 499 aa13.85□□□□□ -0.19
CLIP2-204ENST00000474962 ASB14A6NK59 587 aa13.85□□□□□ -0.19
CLIP2-204ENST00000474962 NFIBO00712 420 aa13.85□□□□□ -0.19
CLIP2-204ENST00000474962 KIAA0355O15063 1070 aa13.85□□□□□ -0.19
CLIP2-204ENST00000474962 KDM4AO75164 1064 aa13.85□□□□□ -0.19
CLIP2-204ENST00000474962 CDK7P50613 346 aa13.85□□□□□ -0.19
CLIP2-204ENST00000474962 EPHB4P54760 987 aa13.85□□□□□ -0.19
CLIP2-204ENST00000474962 ZNF543Q08ER8 600 aa13.85□□□□□ -0.19
CLIP2-204ENST00000474962 TAPT1Q6NXT6 567 aa13.85□□□□□ -0.19
CLIP2-204ENST00000474962 ANKRD33Q7Z3H0 272 aa13.85□□□□□ -0.19
CLIP2-204ENST00000474962 RALYLQ86SE5 291 aaKnown RBP13.85□□□□□ -0.19
CLIP2-204ENST00000474962 KRT23Q9C075 422 aa13.85□□□□□ -0.19
CLIP2-204ENST00000474962 UBA5Q9GZZ9 404 aa13.85□□□□□ -0.19
CLIP2-204ENST00000474962 UPF3AQ9H1J1 476 aaKnown RBP13.85□□□□□ -0.19
CLIP2-204ENST00000474962 SPC25Q9HBM1 224 aa13.85□□□□□ -0.19
CLIP2-204ENST00000474962 ZSWIM5Q9P217 1185 aa13.85□□□□□ -0.19
CLIP2-204ENST00000474962 DCDC2CA8MYV0 355 aa13.84□□□□□ -0.19
CLIP2-204ENST00000474962 B4E1Z4 1266 aa13.84□□□□□ -0.19
CLIP2-204ENST00000474962 DYNC1LI2O43237 492 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms