RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.61□□□□□ -1.67
USP16-205ENST00000474835 PPFIA2O75334 1257 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 RNF8O76064 485 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 CIAO1O76071 339 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 HSPD1P10809 573 aaKnown RBP4.61□□□□□ -1.67
USP16-205ENST00000474835 MCM3P25205 808 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 MARSP56192 900 aaKnown RBP4.61□□□□□ -1.67
USP16-205ENST00000474835 HDLBPQ00341 1268 aaKnown RBP4.61□□□□□ -1.67
USP16-205ENST00000474835 ROR2Q01974 943 aaKnown RBP4.61□□□□□ -1.67
USP16-205ENST00000474835 PNOCQ13519 176 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 ZRSR1Q15695 479 aaKnown RBP4.61□□□□□ -1.67
USP16-205ENST00000474835 MAATS1Q7Z4T9 603 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 SESTD1Q86VW0 696 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 NLRP14Q86W24 1093 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 TBC1D16Q8TBP0 767 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 PBKQ96KB5 322 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 LACRTQ9GZZ8 138 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 DPH5Q9H2P9 285 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 VEZTQ9HBM0 779 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 RWDD2AQ9UIY3 292 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 TSC2P49815 1807 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 ZSWIM8A7E2V4 1837 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 MAP4K4O95819 1239 aaPredicted RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 CYP1A1P04798 512 aaPredicted RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 GM2AP17900 193 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 CDK11BP21127 795 aaKnown RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 HOXC9P31274 260 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 EPHB4P54760 987 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 MGAT5Q09328 741 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 STIM1Q13586 685 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 NAALADL2Q58DX5 795 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 KLHDC7AQ5VTJ3 777 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 LRCH2Q5VUJ6 765 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 NCAPH2Q6IBW4 605 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 CCDC170Q8IYT3 715 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 TRERF1Q96PN7 1200 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 DUSP9Q99956 384 aaKnown RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 CCDC28BQ9BUN5 200 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 RBM38Q9H0Z9 239 aaKnown RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 HAUS4Q9H6D7 363 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 SAMSN1Q9NSI8 373 aaKnown RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 PCMTD2Q9NV79 361 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 NKRFO15226 690 aaKnown RBP eCLIP4.6□□□□□ -1.67
USP16-205ENST00000474835 EDIL3O43854 480 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 URI1O94763 535 aaPredicted RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 NDUFA10O95299 355 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 FAM153BP0C7A2 387 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 CASP14P31944 242 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 NOVP48745 357 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 MNAT1P51948 309 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 EMP3P54852 163 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 SULT2A1Q06520 285 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 ZNF844Q08AG5 666 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 HNRNPDQ14103 355 aaKnown RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 TAF7Q15545 349 aaPredicted RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 EZH2Q15910 746 aaKnown RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 PKN1Q16512 942 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 FAM153CQ494X1 144 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 MCMDC2Q4G0Z9 681 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 ARMC9Q7Z3E5 817 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 FMNL3Q8IVF7 1028 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 LINS1Q8NG48 757 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 ERCC4Q92889 916 aaPredicted RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 CUL5Q93034 780 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 PLA2G12BQ9BX93 195 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 FOXP1Q9H334 677 aaPredicted RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 DEF6Q9H4E7 631 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 FAM153AQ9UHL3 310 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 BLOC1S6Q9UL45 172 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 PHF8Q9UPP1 1060 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 NFASCO94856 1347 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 TNS3Q68CZ2 1445 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 ENO4A6NNW6 628 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 HMGB1P1B2RPK0 211 aaPredicted RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 BTBD18B2RXH4 712 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 TCEA3O75764 348 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 SLC3A2P08195 630 aaKnown RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 ADKP55263 362 aaKnown RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 BTG3Q14201 252 aaPredicted RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 KCNB1Q14721 858 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 TNNI3KQ59H18 835 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 NUTM2DQ5VT03 806 aaPredicted RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 SULT6B1Q6IMI4 303 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 MFSD5Q6N075 450 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 TTI2Q6NXR4 508 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 DHRS4L2Q6PKH6 230 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 CADPS2Q86UW7 1296 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 FERMT3Q86UX7 667 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 NUTM2AQ8IVF1 878 aaPredicted RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 CCHCR1Q8TD31 782 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 ATP6V1G3Q96LB4 118 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 SLF1Q9BQI6 1058 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 LY9Q9HBG7 655 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 FPGT-TNNI3KV9GXZ4 949 aa4.6□□□□□ -1.67
USP16-205ENST00000474835 COL16A1Q07092 1604 aaPredicted RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 AHDC1Q5TGY3 1603 aaPredicted RBP4.6□□□□□ -1.67
USP16-205ENST00000474835 CTAGE9A4FU28 777 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 M0R2C6 588 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 OPLAHO14841 1288 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 KINO60870 393 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms