RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 TFIP11Q9UBB9 837 aaKnown RBP7.6□□□□□ -1.19
ATG4A-207ENST00000474825 SCAF8Q9UPN6 1271 aaKnown RBP7.6□□□□□ -1.19
ATG4A-207ENST00000474825 A0A1W2PQ27 194 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 A0A1W2PQ64 194 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 A0A1W2PQD8 194 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 C19orf81C9J6K1 198 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 USP17L10C9JJH3 530 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 ADAMTS3O15072 1205 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 WDR46O15213 610 aaKnown RBP7.59□□□□□ -1.19
ATG4A-207ENST00000474825 ECM2O94769 699 aaPredicted RBP7.59□□□□□ -1.19
ATG4A-207ENST00000474825 PTPRAP18433 802 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 GNA11P29992 359 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 SLC16A2P36021 539 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 USP14P54578 494 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 BACE1P56817 501 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 NLRP5P59047 1200 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 MAP3K9P80192 1104 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 ATP2B2Q01814 1243 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 GHRHRQ02643 423 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 EARS2Q5JPH6 523 aaKnown RBP7.59□□□□□ -1.19
ATG4A-207ENST00000474825 PRAMEF18Q5VWM3 479 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 ADALQ6DHV7 355 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.59□□□□□ -1.19
ATG4A-207ENST00000474825 KRT26Q7Z3Y9 468 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 FAM160B2Q86V87 743 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 DNAJC5GQ8N7S2 189 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 ZNF280CQ8ND82 737 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 KCNG4Q8TDN1 519 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 CHURC1Q8WUH1 139 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 GPKOWQ92917 476 aaPredicted RBP eCLIP7.59□□□□□ -1.19
ATG4A-207ENST00000474825 SPATA32Q96LK8 384 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 WRNIP1Q96S55 665 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 GLT8D2Q9H1C3 349 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 RANBP17Q9H2T7 1088 aaKnown RBP7.59□□□□□ -1.19
ATG4A-207ENST00000474825 AS3MTQ9HBK9 375 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 BRMS1Q9HCU9 246 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 EMILIN3Q9NT22 766 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 SEC63Q9UGP8 760 aaKnown RBP7.59□□□□□ -1.19
ATG4A-207ENST00000474825 FEM1BQ9UK73 627 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 PRR12Q9ULL5 1215 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 PCDHA6Q9UN73 950 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 AFG3L2Q9Y4W6 797 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 PCDHA8Q9Y5H6 950 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 CLIC4Q9Y696 253 aa7.59□□□□□ -1.19
ATG4A-207ENST00000474825 PAPPA2Q9BXP8 1791 aa7.59□□□□□ -1.2
ATG4A-207ENST00000474825 SMCO2A6NFE2 343 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 TMEM232C9JQI7 657 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 ADM5C9JUS6 153 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 FIBPO43427 364 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 PPP1R12BO60237 982 aaPredicted RBP7.58□□□□□ -1.2
ATG4A-207ENST00000474825 BMP15O95972 392 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 FDX1P10109 184 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 STAT2P52630 851 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 TRAF1Q13077 416 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 ORC2Q13416 577 aaPredicted RBP7.58□□□□□ -1.2
ATG4A-207ENST00000474825 CDC37Q16543 378 aaPredicted RBP7.58□□□□□ -1.2
ATG4A-207ENST00000474825 CCDC96Q2M329 555 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 QRICH1Q2TAL8 776 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 FOXD4L6Q3SYB3 417 aaPredicted RBP7.58□□□□□ -1.2
ATG4A-207ENST00000474825 AXDND1Q5T1B0 1012 aaPredicted RBP7.58□□□□□ -1.2
ATG4A-207ENST00000474825 LDLRAD1Q5T700 205 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 MCTP2Q6DN12 878 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 FOXD4L3Q6VB84 417 aaPredicted RBP7.58□□□□□ -1.2
ATG4A-207ENST00000474825 HEATR3Q7Z4Q2 680 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 BICD2Q8TD16 824 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 ZKSCAN4Q969J2 545 aaPredicted RBP7.58□□□□□ -1.2
ATG4A-207ENST00000474825 CDCA5Q96FF9 252 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 NUP88Q99567 741 aaPredicted RBP7.58□□□□□ -1.2
ATG4A-207ENST00000474825 FTOQ9C0B1 505 aaKnown RBP eCLIP7.58□□□□□ -1.2
ATG4A-207ENST00000474825 VAT1LQ9HCJ6 419 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 C6orf50Q9HD87 102 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 RIC8AQ9NPQ8 531 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.58□□□□□ -1.2
ATG4A-207ENST00000474825 ADAMTS5Q9UNA0 930 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 MTMR7Q9Y216 660 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 SNCAIPQ9Y6H5 919 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 DDX49Q9Y6V7 483 aaKnown RBP7.58□□□□□ -1.2
ATG4A-207ENST00000474825 MYH4Q9Y623 1939 aa7.58□□□□□ -1.2
ATG4A-207ENST00000474825 PIK3CDO00329 1044 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 OPLAHO14841 1288 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 SPTLC2O15270 562 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 EDIL3O43854 480 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 CMA1P23946 247 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 MRPL12P52815 198 aaKnown RBP7.57□□□□□ -1.2
ATG4A-207ENST00000474825 NAPAP54920 295 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 ZNF445P59923 1031 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 SPP2Q13103 211 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 VGLL4Q14135 290 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 SF3A1Q15459 793 aaKnown RBP7.57□□□□□ -1.2
ATG4A-207ENST00000474825 NOM1Q5C9Z4 860 aaKnown RBP7.57□□□□□ -1.2
ATG4A-207ENST00000474825 FAM83BQ5T0W9 1011 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 NYAP1Q6ZVC0 841 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 KRT25Q7Z3Z0 450 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 CCDC84Q86UT8 332 aaPredicted RBP7.57□□□□□ -1.2
ATG4A-207ENST00000474825 HOMER1Q86YM7 354 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 C4orf32Q8N8J7 132 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 PRPF38AQ8NAV1 312 aaKnown RBP7.57□□□□□ -1.2
ATG4A-207ENST00000474825 ENGASEQ8NFI3 743 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 CRYGNQ8WXF5 182 aa7.57□□□□□ -1.2
ATG4A-207ENST00000474825 COA7Q96BR5 231 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms