RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 ADAMTS4O75173 837 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 SLC25A27O95847 323 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 SNAI1O95863 264 aaPredicted RBP7.03□□□□□ -1.28
CPSF7-210ENST00000474684 TTLL1O95922 423 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 PGK1P00558 417 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 IGHDP01880 384 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 CAPN2P17655 700 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 BMP8BP34820 402 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 ADCYAP1R1P41586 468 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 HAND2P61296 217 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 TFAP4Q01664 338 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 SNX17Q15036 470 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 SLFN13Q68D06 897 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 B4GALNT3Q6L9W6 998 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 KCTD1Q719H9 257 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 SH3RF1Q7Z6J0 888 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 TDHQ8IZJ6 230 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 GMCL1P1Q8NEA9 526 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 MKL1Q969V6 931 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 EVI5LQ96CN4 794 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 UBE2OQ9C0C9 1292 aaKnown RBP7.03□□□□□ -1.28
CPSF7-210ENST00000474684 KATNBL1Q9H079 304 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 SLC38A10Q9HBR0 1119 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 PDLIM7Q9NR12 457 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 ZHX1Q9UKY1 873 aaPredicted RBP7.03□□□□□ -1.28
CPSF7-210ENST00000474684 ISY1Q9ULR0 285 aaKnown RBP7.03□□□□□ -1.28
CPSF7-210ENST00000474684 STX8Q9UNK0 236 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 MTMR7Q9Y216 660 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 ATP11BQ9Y2G3 1177 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 WDR81Q562E7 1941 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 LOXHD1Q8IVV2 1947 aa7.03□□□□□ -1.28
CPSF7-210ENST00000474684 CCDC171Q6TFL3 1326 aa7.02□□□□□ -1.28
CPSF7-210ENST00000474684 NCOR1O75376 2440 aa7.02□□□□□ -1.28
CPSF7-210ENST00000474684 SIP14410 1827 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 KAT6AQ92794 2004 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 TSPY2A6NKD2 308 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 TMEM232C9JQI7 657 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 KBTBD13C9JR72 458 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 ATP2A1O14983 1001 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 ORC4O43929 436 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 BMP3P12645 472 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 MCCP23508 829 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 ITGB8P26012 769 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 CNTN2Q02246 1040 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 PDE4BQ07343 736 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 MUM1L1Q5H9M0 696 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 TTBK2Q6IQ55 1244 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 CCDC174Q6PII3 467 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.02□□□□□ -1.29
CPSF7-210ENST00000474684 PLEKHM2Q8IWE5 1019 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 ZNF444Q8N0Y2 327 aaPredicted RBP7.02□□□□□ -1.29
CPSF7-210ENST00000474684 ANKK1Q8NFD2 765 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 AGBL1Q96MI9 1066 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 PURBQ96QR8 312 aaKnown RBP7.02□□□□□ -1.29
CPSF7-210ENST00000474684 NACAP1Q9BZK3 213 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 A1CFQ9NQ94 594 aaKnown RBP7.02□□□□□ -1.29
CPSF7-210ENST00000474684 XPNPEP3Q9NQH7 507 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 PRDM5Q9NQX1 630 aaPredicted RBP7.02□□□□□ -1.29
CPSF7-210ENST00000474684 RNF146Q9NTX7 359 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 PHF24Q9UPV7 400 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 COL4A4P53420 1690 aaPredicted RBP7.02□□□□□ -1.29
CPSF7-210ENST00000474684 TTC28Q96AY4 2481 aa7.02□□□□□ -1.29
CPSF7-210ENST00000474684 ZMYM6O95789 1325 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 FRMPD2Q68DX3 1309 aaPredicted RBP7.01□□□□□ -1.29
CPSF7-210ENST00000474684 ATG2AQ2TAZ0 1938 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 MICAL3Q7RTP6 2002 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 CHD7Q9P2D1 2997 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.01□□□□□ -1.29
CPSF7-210ENST00000474684 A0A1W2PQ45 241 aaPredicted RBP7.01□□□□□ -1.29
CPSF7-210ENST00000474684 A0A1W2PQY0 241 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 TRIM43BA6NCK2 446 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 RBAK-RBAKDNI3L0D1 243 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 RANBP6O60518 1105 aaKnown RBP7.01□□□□□ -1.29
CPSF7-210ENST00000474684 FGAP02671 866 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 FGRP09769 529 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 HSPD1P10809 573 aaKnown RBP7.01□□□□□ -1.29
CPSF7-210ENST00000474684 RARBP10826 455 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 AKR1A1P14550 325 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 PDE4AP27815 886 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 COPB2P35606 906 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 SLC16A2P36021 539 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 SLC1A4P43007 532 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 NOVP48745 357 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 STAT2P52630 851 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 FOSBP53539 338 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 KCNC4Q03721 635 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 CCDC96Q2M329 555 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 LRRFIP1Q32MZ4 808 aaKnown RBP7.01□□□□□ -1.29
CPSF7-210ENST00000474684 RRP12Q5JTH9 1297 aaKnown RBP7.01□□□□□ -1.29
CPSF7-210ENST00000474684 C9orf50Q5SZB4 431 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 TMEM63BQ5T3F8 832 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 RCSD1Q6JBY9 416 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 SLC39A5Q6ZMH5 540 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 ARMCX2Q7L311 632 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 FAM133AQ8N9E0 248 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 PRPF38AQ8NAV1 312 aaKnown RBP7.01□□□□□ -1.29
CPSF7-210ENST00000474684 TRIM43Q96BQ3 446 aaPredicted RBP7.01□□□□□ -1.29
CPSF7-210ENST00000474684 GMCL1Q96IK5 515 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 CPVLQ9H3G5 476 aa7.01□□□□□ -1.29
CPSF7-210ENST00000474684 HELLSQ9NRZ9 838 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms