RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 SLC1A4P43007 532 aa16.62■□□□□ 0.25
CCDC78-209ENST00000474647 PPARAQ07869 468 aa16.62■□□□□ 0.25
CCDC78-209ENST00000474647 TJAP1Q5JTD0 557 aa16.62■□□□□ 0.25
CCDC78-209ENST00000474647 FAM160B2Q86V87 743 aa16.62■□□□□ 0.25
CCDC78-209ENST00000474647 FAM133AQ8N9E0 248 aa16.62■□□□□ 0.25
CCDC78-209ENST00000474647 CHURC1Q8WUH1 139 aa16.62■□□□□ 0.25
CCDC78-209ENST00000474647 TRERF1Q96PN7 1200 aa16.62■□□□□ 0.25
CCDC78-209ENST00000474647 FSD1Q9BTV5 496 aa16.62■□□□□ 0.25
CCDC78-209ENST00000474647 PRDM6Q9NQX0 595 aa16.62■□□□□ 0.25
CCDC78-209ENST00000474647 STX8Q9UNK0 236 aa16.62■□□□□ 0.25
CCDC78-209ENST00000474647 ASTN1O14525 1302 aa16.62■□□□□ 0.25
CCDC78-209ENST00000474647 PTPRSQ13332 1948 aa16.61■□□□□ 0.25
CCDC78-209ENST00000474647 KIAA1217Q5T5P2 1943 aa16.61■□□□□ 0.25
CCDC78-209ENST00000474647 SOWAHBA6NEL2 793 aa16.61■□□□□ 0.25
CCDC78-209ENST00000474647 ASB14A6NK59 587 aa16.61■□□□□ 0.25
CCDC78-209ENST00000474647 PTGS1P23219 599 aa16.61■□□□□ 0.25
CCDC78-209ENST00000474647 MCCP23508 829 aa16.61■□□□□ 0.25
CCDC78-209ENST00000474647 SNAP25P60880 206 aa16.61■□□□□ 0.25
CCDC78-209ENST00000474647 FSCN1Q16658 493 aaKnown RBP16.61■□□□□ 0.25
CCDC78-209ENST00000474647 KCTD1Q719H9 257 aa16.61■□□□□ 0.25
CCDC78-209ENST00000474647 EEPD1Q7L9B9 569 aa16.61■□□□□ 0.25
CCDC78-209ENST00000474647 RASGRP2Q7LDG7 609 aa16.61■□□□□ 0.25
CCDC78-209ENST00000474647 AP5M1Q9H0R1 490 aa16.61■□□□□ 0.25
CCDC78-209ENST00000474647 HIPK3Q9H422 1215 aa16.61■□□□□ 0.25
CCDC78-209ENST00000474647 IL23AQ9NPF7 189 aa16.61■□□□□ 0.25
CCDC78-209ENST00000474647 ZNF536O15090 1300 aa16.61■□□□□ 0.25
CCDC78-209ENST00000474647 MYH7BA7E2Y1 1941 aa16.6■□□□□ 0.25
CCDC78-209ENST00000474647 TSPY2A6NKD2 308 aa16.6■□□□□ 0.25
CCDC78-209ENST00000474647 CD4P01730 458 aa16.6■□□□□ 0.25
CCDC78-209ENST00000474647 ITGA7Q13683 1181 aa16.6■□□□□ 0.25
CCDC78-209ENST00000474647 RASIP1Q5U651 963 aa16.6■□□□□ 0.25
CCDC78-209ENST00000474647 FBXO16Q8IX29 292 aaPredicted RBP16.6■□□□□ 0.25
CCDC78-209ENST00000474647 STAG1Q8WVM7 1258 aa16.6■□□□□ 0.25
CCDC78-209ENST00000474647 GMCL1Q96IK5 515 aa16.6■□□□□ 0.25
CCDC78-209ENST00000474647 MTIF3Q9H2K0 278 aaKnown RBP16.6■□□□□ 0.25
CCDC78-209ENST00000474647 DCTPP1Q9H773 170 aa16.6■□□□□ 0.25
CCDC78-209ENST00000474647 MSRAQ9UJ68 235 aa16.6■□□□□ 0.25
CCDC78-209ENST00000474647 UMODL1Q5DID0 1318 aa16.6■□□□□ 0.25
CCDC78-209ENST00000474647 XIRP2A4UGR9 3374 aa16.6■□□□□ 0.25
CCDC78-209ENST00000474647 SCN10AQ9Y5Y9 1956 aa16.59■□□□□ 0.25
CCDC78-209ENST00000474647 ERC2O15083 957 aa16.59■□□□□ 0.25
CCDC78-209ENST00000474647 DYNC1LI2O43237 492 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-209ENST00000474647 SMPD1P17405 629 aa16.59■□□□□ 0.25
CCDC78-209ENST00000474647 IGFBP4P22692 258 aa16.59■□□□□ 0.25
CCDC78-209ENST00000474647 CCL23P55773 120 aa16.59■□□□□ 0.25
CCDC78-209ENST00000474647 CTDSPL2Q05D32 466 aa16.59■□□□□ 0.25
CCDC78-209ENST00000474647 RAB30Q15771 203 aa16.59■□□□□ 0.25
CCDC78-209ENST00000474647 CCDC85BQ15834 202 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-209ENST00000474647 TKFCQ3LXA3 575 aa16.59■□□□□ 0.25
CCDC78-209ENST00000474647 MUM1L1Q5H9M0 696 aa16.59■□□□□ 0.25
CCDC78-209ENST00000474647 NSMFQ6X4W1 530 aa16.59■□□□□ 0.25
CCDC78-209ENST00000474647 OTOP2Q7RTS6 562 aa16.59■□□□□ 0.25
CCDC78-209ENST00000474647 NKX2-4Q9H2Z4 354 aa16.59■□□□□ 0.25
CCDC78-209ENST00000474647 PDGFCQ9NRA1 345 aa16.59■□□□□ 0.25
CCDC78-209ENST00000474647 CXXC1Q9P0U4 656 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-209ENST00000474647 GNEQ9Y223 722 aaKnown RBP16.59■□□□□ 0.25
CCDC78-209ENST00000474647 TTC41PQ6P2S7 1318 aa16.59■□□□□ 0.25
CCDC78-209ENST00000474647 COL4A4P53420 1690 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-209ENST00000474647 LAMA4Q16363 1823 aa16.59■□□□□ 0.25
CCDC78-209ENST00000474647 ZEB2O60315 1214 aa16.58■□□□□ 0.24
CCDC78-209ENST00000474647 NMT2O60551 498 aa16.58■□□□□ 0.24
CCDC78-209ENST00000474647 CABYRO75952 493 aa16.58■□□□□ 0.24
CCDC78-209ENST00000474647 FGBP02675 491 aa16.58■□□□□ 0.24
CCDC78-209ENST00000474647 PSMC6P62333 389 aa16.58■□□□□ 0.24
CCDC78-209ENST00000474647 CCDC96Q2M329 555 aa16.58■□□□□ 0.24
CCDC78-209ENST00000474647 HERVK_113Q902F9 699 aa16.58■□□□□ 0.24
CCDC78-209ENST00000474647 CYP39A1Q9NYL5 469 aa16.58■□□□□ 0.24
CCDC78-209ENST00000474647 THEGQ9P2T0 379 aa16.58■□□□□ 0.24
CCDC78-209ENST00000474647 CCPG1Q9ULG6 757 aa16.58■□□□□ 0.24
CCDC78-209ENST00000474647 PRR12Q9ULL5 1215 aa16.58■□□□□ 0.24
CCDC78-209ENST00000474647 TNFRSF10AO00220 468 aa16.57■□□□□ 0.24
CCDC78-209ENST00000474647 B4GALT4O60513 344 aa16.57■□□□□ 0.24
CCDC78-209ENST00000474647 RANBP6O60518 1105 aaKnown RBP16.57■□□□□ 0.24
CCDC78-209ENST00000474647 NKX3-2P78367 333 aa16.57■□□□□ 0.24
CCDC78-209ENST00000474647 PPP4R3BQ5MIZ7 849 aa16.57■□□□□ 0.24
CCDC78-209ENST00000474647 PI4K2BQ8TCG2 481 aa16.57■□□□□ 0.24
CCDC78-209ENST00000474647 PURBQ96QR8 312 aaKnown RBP16.57■□□□□ 0.24
CCDC78-209ENST00000474647 TRPV6Q9H1D0 765 aa16.57■□□□□ 0.24
CCDC78-209ENST00000474647 SLC28A3Q9HAS3 691 aa16.57■□□□□ 0.24
CCDC78-209ENST00000474647 INCENPQ9NQS7 918 aa16.57■□□□□ 0.24
CCDC78-209ENST00000474647 NCOR1O75376 2440 aa16.56■□□□□ 0.24
CCDC78-209ENST00000474647 GRIN2DO15399 1336 aa16.56■□□□□ 0.24
CCDC78-209ENST00000474647 ZBBXA8MT70 800 aa16.56■□□□□ 0.24
CCDC78-209ENST00000474647 ZMYM1Q5SVZ6 1142 aa16.56■□□□□ 0.24
CCDC78-209ENST00000474647 AKNAD1Q5T1N1 836 aa16.56■□□□□ 0.24
CCDC78-209ENST00000474647 TMEM63BQ5T3F8 832 aa16.56■□□□□ 0.24
CCDC78-209ENST00000474647 RCSD1Q6JBY9 416 aa16.56■□□□□ 0.24
CCDC78-209ENST00000474647 KIAA1211Q6ZU35 1233 aa16.56■□□□□ 0.24
CCDC78-209ENST00000474647 SLC43A3Q8NBI5 491 aa16.56■□□□□ 0.24
CCDC78-209ENST00000474647 TET1Q8NFU7 2136 aa16.56■□□□□ 0.24
CCDC78-209ENST00000474647 OTUD7AQ8TE49 926 aaPredicted RBP16.56■□□□□ 0.24
CCDC78-209ENST00000474647 NOC4LQ9BVI4 516 aaKnown RBP16.56■□□□□ 0.24
CCDC78-209ENST00000474647 WNT8AQ9H1J5 351 aa16.56■□□□□ 0.24
CCDC78-209ENST00000474647 TOMM22Q9NS69 142 aa16.56■□□□□ 0.24
CCDC78-209ENST00000474647 YBX2Q9Y2T7 364 aaKnown RBP16.56■□□□□ 0.24
CCDC78-209ENST00000474647 PLA2G6O60733 806 aa16.55■□□□□ 0.24
CCDC78-209ENST00000474647 RABGGTBP53611 331 aa16.55■□□□□ 0.24
CCDC78-209ENST00000474647 ADGRE1Q14246 886 aa16.55■□□□□ 0.24
CCDC78-209ENST00000474647 IQSEC1Q6DN90 963 aa16.55■□□□□ 0.24
CCDC78-209ENST00000474647 TAPT1Q6NXT6 567 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms