RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 DDX11Q96FC9 970 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 MAP3K14Q99558 947 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 ZKSCAN3Q9BRR0 538 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 PAGR1Q9BTK6 254 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 MROH8Q9H579 483 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 PTPN22Q9Y2R2 807 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 TRIM17Q9Y577 477 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 CASP8AP2Q9UKL3 1982 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 CCDC69A6NI79 296 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 SLC15A5A6NIM6 579 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 VWA5AO00534 786 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 TNPO2O14787 897 aaKnown RBP4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 ATP2A1O14983 1001 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 STRNO43815 780 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 JAK2O60674 1132 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 DDAH1O94760 285 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 PARP1P09874 1014 aaKnown RBP4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 PDHBP11177 359 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 ZSCAN20P17040 1043 aaPredicted RBP4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 KRT85P78386 507 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 ZNF543Q08ER8 600 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 DHX32Q7L7V1 743 aaKnown RBP4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 PLEKHH3Q7Z736 793 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 ABRAQ8N0Z2 381 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 SOCS4Q8WXH5 440 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 ATG4CQ96DT6 458 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 NUP88Q99567 741 aaPredicted RBP4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 MCOLN1Q9GZU1 580 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 MAF1Q9H063 256 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 SPATC1LQ9H0A9 340 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 SLC38A10Q9HBR0 1119 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 SLC5A4Q9NY91 659 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 BTBD7Q9P203 1132 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 SRRDQ9UH36 339 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 ZNF236Q9UL36 1845 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 GOLGA6L4A6NEF3 574 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 SH2B2O14492 632 aaPredicted RBP4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 PDIA4P13667 645 aaKnown RBP4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 LIG1P18858 919 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 KIF5BP33176 963 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 STAT3P40763 770 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 RGS2P41220 211 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 LIFRP42702 1097 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 TERF1P54274 439 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 ANTXR2P58335 489 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 DMTNQ08495 405 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 TRAF1Q13077 416 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 IRF5Q13568 498 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 PLS1Q14651 629 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 COL13A1Q5TAT6 717 aaPredicted RBP4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 SYDE2Q5VT97 1194 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 SYNE3Q6ZMZ3 975 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 NFXL1Q6ZNB6 911 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 NBPF11Q86T75 865 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 RIOX2Q8IUF8 465 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 TNS4Q8IZW8 715 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 REPS2Q8NFH8 660 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 RAET1EQ8TD07 263 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 IGDCC4Q8TDY8 1250 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 BRF1Q92994 677 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 KIFC2Q96AC6 838 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 TRIM47Q96LD4 638 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 NUDT12Q9BQG2 462 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 LZTS2Q9BRK4 669 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 FUCA2Q9BTY2 467 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 TEX13BQ9BXU2 312 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 LY9Q9HBG7 655 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 TXNRD2Q9NNW7 524 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 FBXO40Q9UH90 709 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 IVNS1ABPQ9Y6Y0 642 aa4.8□□□□□ -1.64
GAPVD1-216ENST00000474637 VGLL3A8MV65 326 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 DYNC1I1O14576 645 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 AP5Z1O43299 807 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 PPFIA3O75145 1194 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 CAPN2P17655 700 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 GNAQP50148 359 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 RCAN1P53805 252 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 EXOSC10Q01780 885 aaKnown RBP4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 GRM4Q14833 912 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 TMEM132BQ14DG7 1078 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 Q3C1V9 767 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 KCTD1Q719H9 257 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 GPR142Q7Z601 462 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 CKAP2LQ8IYA6 745 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 FBXL16Q8N461 479 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 SLAIN1Q8ND83 568 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 CHST13Q8NET6 341 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 PXYLP1Q8TE99 480 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 SPATA32Q96LK8 384 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 MOV10L1Q9BXT6 1211 aaKnown RBP4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 ARHGAP39Q9C0H5 1083 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 SCAND2PQ9GZW5 306 aaPredicted RBP4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 RANBP17Q9H2T7 1088 aaKnown RBP4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 TTC12Q9H892 705 aaPredicted RBP4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 GPCPD1Q9NPB8 672 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 FBXO28Q9NVF7 368 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 PRR12Q9ULL5 1215 aa4.79□□□□□ -1.64
GAPVD1-216ENST00000474637 COL11A1P12107 1806 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms