RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 TFAP4Q01664 338 aa13.69□□□□□ -0.22
EXOSC1-207ENST00000474309 ITGA7Q13683 1181 aa13.69□□□□□ -0.22
EXOSC1-207ENST00000474309 RCSD1Q6JBY9 416 aa13.69□□□□□ -0.22
EXOSC1-207ENST00000474309 NOL8Q76FK4 1167 aaKnown RBP13.69□□□□□ -0.22
EXOSC1-207ENST00000474309 LRRC47Q8N1G4 583 aaKnown RBP13.69□□□□□ -0.22
EXOSC1-207ENST00000474309 AGBL1Q96MI9 1066 aa13.69□□□□□ -0.22
EXOSC1-207ENST00000474309 TRERF1Q96PN7 1200 aa13.69□□□□□ -0.22
EXOSC1-207ENST00000474309 PPP1R12CQ9BZL4 782 aa13.69□□□□□ -0.22
EXOSC1-207ENST00000474309 AP5M1Q9H0R1 490 aa13.69□□□□□ -0.22
EXOSC1-207ENST00000474309 RNF146Q9NTX7 359 aa13.69□□□□□ -0.22
EXOSC1-207ENST00000474309 M0R2C6 588 aa13.68□□□□□ -0.22
EXOSC1-207ENST00000474309 DYNC1LI2O43237 492 aaPredicted RBP13.68□□□□□ -0.22
EXOSC1-207ENST00000474309 MCCP23508 829 aa13.68□□□□□ -0.22
EXOSC1-207ENST00000474309 FSCN1Q16658 493 aaKnown RBP13.68□□□□□ -0.22
EXOSC1-207ENST00000474309 TAPT1Q6NXT6 567 aa13.68□□□□□ -0.22
EXOSC1-207ENST00000474309 CXCL17Q6UXB2 119 aa13.68□□□□□ -0.22
EXOSC1-207ENST00000474309 TLK2Q86UE8 772 aa13.68□□□□□ -0.22
EXOSC1-207ENST00000474309 RPUSD2Q8IZ73 545 aaKnown RBP13.68□□□□□ -0.22
EXOSC1-207ENST00000474309 MORC4Q8TE76 937 aa13.68□□□□□ -0.22
EXOSC1-207ENST00000474309 HIPK3Q9H422 1215 aa13.68□□□□□ -0.22
EXOSC1-207ENST00000474309 PRDM12Q9H4Q4 367 aa13.68□□□□□ -0.22
EXOSC1-207ENST00000474309 HOMER2Q9NSB8 354 aa13.68□□□□□ -0.22
EXOSC1-207ENST00000474309 GRIN2DO15399 1336 aa13.67□□□□□ -0.22
EXOSC1-207ENST00000474309 TTC41PQ6P2S7 1318 aa13.67□□□□□ -0.22
EXOSC1-207ENST00000474309 LOC102724159A0A0B4J2E5 919 aa13.67□□□□□ -0.22
EXOSC1-207ENST00000474309 ERC2O15083 957 aa13.67□□□□□ -0.22
EXOSC1-207ENST00000474309 ALAS1P13196 640 aa13.67□□□□□ -0.22
EXOSC1-207ENST00000474309 SMPD1P17405 629 aa13.67□□□□□ -0.22
EXOSC1-207ENST00000474309 PPARAQ07869 468 aa13.67□□□□□ -0.22
EXOSC1-207ENST00000474309 PWP2Q15269 919 aaKnown RBP13.67□□□□□ -0.22
EXOSC1-207ENST00000474309 NAPBQ9H115 298 aa13.67□□□□□ -0.22
EXOSC1-207ENST00000474309 SLC28A3Q9HAS3 691 aa13.67□□□□□ -0.22
EXOSC1-207ENST00000474309 VTA1Q9NP79 307 aa13.67□□□□□ -0.22
EXOSC1-207ENST00000474309 CYP39A1Q9NYL5 469 aa13.67□□□□□ -0.22
EXOSC1-207ENST00000474309 NOVP48745 357 aa13.66□□□□□ -0.22
EXOSC1-207ENST00000474309 MRPS5P82675 430 aaKnown RBP13.66□□□□□ -0.22
EXOSC1-207ENST00000474309 IKQ13123 557 aaPredicted RBP13.66□□□□□ -0.22
EXOSC1-207ENST00000474309 ADGRE1Q14246 886 aa13.66□□□□□ -0.22
EXOSC1-207ENST00000474309 ZMYM1Q5SVZ6 1142 aa13.66□□□□□ -0.22
EXOSC1-207ENST00000474309 ASB2Q96Q27 587 aa13.66□□□□□ -0.22
EXOSC1-207ENST00000474309 NOC4LQ9BVI4 516 aaKnown RBP13.66□□□□□ -0.22
EXOSC1-207ENST00000474309 CXXC1Q9P0U4 656 aaPredicted RBP13.66□□□□□ -0.22
EXOSC1-207ENST00000474309 THEGQ9P2T0 379 aa13.66□□□□□ -0.22
EXOSC1-207ENST00000474309 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.66□□□□□ -0.22
EXOSC1-207ENST00000474309 B4GALT4O60513 344 aa13.65□□□□□ -0.22
EXOSC1-207ENST00000474309 SUPT20HL2P0C7V6 817 aa13.65□□□□□ -0.22
EXOSC1-207ENST00000474309 C20orf194Q5TEA3 1177 aa13.65□□□□□ -0.22
EXOSC1-207ENST00000474309 DIEXFQ68CQ4 756 aaKnown RBP13.65□□□□□ -0.22
EXOSC1-207ENST00000474309 PPM1EQ8WY54 764 aa13.65□□□□□ -0.22
EXOSC1-207ENST00000474309 SEC62Q99442 399 aaKnown RBP13.65□□□□□ -0.22
EXOSC1-207ENST00000474309 NKX2-4Q9H2Z4 354 aa13.65□□□□□ -0.22
EXOSC1-207ENST00000474309 PDGFCQ9NRA1 345 aa13.65□□□□□ -0.22
EXOSC1-207ENST00000474309 IL17RBQ9NRM6 502 aa13.65□□□□□ -0.22
EXOSC1-207ENST00000474309 PRR12Q9ULL5 1215 aa13.65□□□□□ -0.22
EXOSC1-207ENST00000474309 ISY1Q9ULR0 285 aaKnown RBP13.65□□□□□ -0.22
EXOSC1-207ENST00000474309 TSPY2A6NKD2 308 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 ICAM1P05362 532 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 PFKMP08237 780 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 CCL23P55773 120 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 DUSP28Q4G0W2 176 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 MUM1L1Q5H9M0 696 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 TSHZ3Q63HK5 1081 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 BTNL9Q6UXG8 535 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 KIAA1211Q6ZU35 1233 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 KCTD1Q719H9 257 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 OTOP2Q7RTS6 562 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 PI4K2BQ8TCG2 481 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 TRPV6Q9H1D0 765 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 POLR3EQ9NVU0 708 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 ADD3Q9UEY8 706 aaKnown RBP13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 ANAPC4Q9UJX5 808 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 STX8Q9UNK0 236 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 PCDHA11Q9Y5I1 949 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 SLC4A7Q9Y6M7 1214 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 UMODL1Q5DID0 1318 aa13.64□□□□□ -0.23
EXOSC1-207ENST00000474309 RBM47A0AV96 593 aaKnown RBP13.63□□□□□ -0.23
EXOSC1-207ENST00000474309 FGRP09769 529 aa13.63□□□□□ -0.23
EXOSC1-207ENST00000474309 IGFBP4P22692 258 aa13.63□□□□□ -0.23
EXOSC1-207ENST00000474309 NSMFQ6X4W1 530 aa13.63□□□□□ -0.23
EXOSC1-207ENST00000474309 EEPD1Q7L9B9 569 aa13.63□□□□□ -0.23
EXOSC1-207ENST00000474309 FBXO16Q8IX29 292 aaPredicted RBP13.63□□□□□ -0.23
EXOSC1-207ENST00000474309 DCAF4Q8WV16 495 aa13.63□□□□□ -0.23
EXOSC1-207ENST00000474309 WNT8AQ9H1J5 351 aa13.63□□□□□ -0.23
EXOSC1-207ENST00000474309 ALDH8A1Q9H2A2 487 aaPredicted RBP13.63□□□□□ -0.23
EXOSC1-207ENST00000474309 TSPYL2Q9H2G4 693 aaPredicted RBP13.63□□□□□ -0.23
EXOSC1-207ENST00000474309 PNMA2Q9UL42 364 aa13.63□□□□□ -0.23
EXOSC1-207ENST00000474309 CCPG1Q9ULG6 757 aa13.63□□□□□ -0.23
EXOSC1-207ENST00000474309 YBX2Q9Y2T7 364 aaKnown RBP13.63□□□□□ -0.23
EXOSC1-207ENST00000474309 GBF1Q92538 1859 aa13.63□□□□□ -0.23
EXOSC1-207ENST00000474309 PRRC2BQ5JSZ5 2229 aaKnown RBP13.63□□□□□ -0.23
EXOSC1-207ENST00000474309 MUC3AQ02505 3323 aa13.62□□□□□ -0.23
EXOSC1-207ENST00000474309 ORC4O43929 436 aa13.62□□□□□ -0.23
EXOSC1-207ENST00000474309 POU3F3P20264 500 aaPredicted RBP13.62□□□□□ -0.23
EXOSC1-207ENST00000474309 COL9A1P20849 921 aa13.62□□□□□ -0.23
EXOSC1-207ENST00000474309 BAATQ14032 418 aaPredicted RBP13.62□□□□□ -0.23
EXOSC1-207ENST00000474309 ALX1Q15699 326 aa13.62□□□□□ -0.23
EXOSC1-207ENST00000474309 VWCEQ96DN2 955 aa13.62□□□□□ -0.23
EXOSC1-207ENST00000474309 FSD1Q9BTV5 496 aa13.62□□□□□ -0.23
EXOSC1-207ENST00000474309 WDR11Q9BZH6 1224 aa13.62□□□□□ -0.23
EXOSC1-207ENST00000474309 RANBP17Q9H2T7 1088 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms