RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 ZNF296Q8WUU4 475 aaPredicted RBP12.01□□□□□ -0.49
CASC3-204ENST00000474190 GPKOWQ92917 476 aaPredicted RBP eCLIP12.01□□□□□ -0.49
CASC3-204ENST00000474190 COA7Q96BR5 231 aa12.01□□□□□ -0.49
CASC3-204ENST00000474190 TRIM47Q96LD4 638 aa12.01□□□□□ -0.49
CASC3-204ENST00000474190 STK36Q9NRP7 1315 aa12.01□□□□□ -0.49
CASC3-204ENST00000474190 BAZ2BQ9UIF8 2168 aaKnown RBP12.01□□□□□ -0.49
CASC3-204ENST00000474190 CENPFP49454 3210 aa12□□□□□ -0.49
CASC3-204ENST00000474190 EDIL3O43854 480 aa12□□□□□ -0.49
CASC3-204ENST00000474190 IKQ13123 557 aaPredicted RBP12□□□□□ -0.49
CASC3-204ENST00000474190 MORN1Q5T089 497 aa12□□□□□ -0.49
CASC3-204ENST00000474190 PURBQ96QR8 312 aaKnown RBP12□□□□□ -0.49
CASC3-204ENST00000474190 LLPHQ9BRT6 129 aaKnown RBP12□□□□□ -0.49
CASC3-204ENST00000474190 SLC26A6Q9BXS9 759 aa12□□□□□ -0.49
CASC3-204ENST00000474190 BARHL2Q9NY43 387 aa12□□□□□ -0.49
CASC3-204ENST00000474190 COL20A1Q9P218 1284 aa12□□□□□ -0.49
CASC3-204ENST00000474190 ISY1Q9ULR0 285 aaKnown RBP12□□□□□ -0.49
CASC3-204ENST00000474190 DNAJC25-GNG10A0A024R161 153 aa11.99□□□□□ -0.49
CASC3-204ENST00000474190 M0R2N6 131 aa11.99□□□□□ -0.49
CASC3-204ENST00000474190 MEIS2O14770 477 aa11.99□□□□□ -0.49
CASC3-204ENST00000474190 COBLO75128 1261 aa11.99□□□□□ -0.49
CASC3-204ENST00000474190 SCG2P13521 617 aa11.99□□□□□ -0.49
CASC3-204ENST00000474190 SP3Q02447 781 aa11.99□□□□□ -0.49
CASC3-204ENST00000474190 USH1GQ495M9 461 aa11.99□□□□□ -0.49
CASC3-204ENST00000474190 GPR142Q7Z601 462 aa11.99□□□□□ -0.49
CASC3-204ENST00000474190 FBXO11Q86XK2 927 aa11.99□□□□□ -0.49
CASC3-204ENST00000474190 RRP36Q96EU6 259 aaKnown RBP11.99□□□□□ -0.49
CASC3-204ENST00000474190 AMNQ9BXJ7 453 aa11.99□□□□□ -0.49
CASC3-204ENST00000474190 A1CFQ9NQ94 594 aaKnown RBP11.99□□□□□ -0.49
CASC3-204ENST00000474190 RNF146Q9NTX7 359 aa11.99□□□□□ -0.49
CASC3-204ENST00000474190 CCPG1Q9ULG6 757 aa11.99□□□□□ -0.49
CASC3-204ENST00000474190 PCDHA1Q9Y5I3 950 aa11.99□□□□□ -0.49
CASC3-204ENST00000474190 SMCHD1A6NHR9 2005 aa11.98□□□□□ -0.49
CASC3-204ENST00000474190 GRB14Q14449 540 aa11.98□□□□□ -0.49
CASC3-204ENST00000474190 TKFCQ3LXA3 575 aa11.98□□□□□ -0.49
CASC3-204ENST00000474190 SLC30A10Q6XR72 485 aa11.98□□□□□ -0.49
CASC3-204ENST00000474190 CD99L2Q8TCZ2 262 aa11.98□□□□□ -0.49
CASC3-204ENST00000474190 DDX11Q96FC9 970 aa11.98□□□□□ -0.49
CASC3-204ENST00000474190 TRERF1Q96PN7 1200 aa11.98□□□□□ -0.49
CASC3-204ENST00000474190 HOMER2Q9NSB8 354 aa11.98□□□□□ -0.49
CASC3-204ENST00000474190 ORC3Q9UBD5 711 aaPredicted RBP11.98□□□□□ -0.49
CASC3-204ENST00000474190 RBM19Q9Y4C8 960 aaKnown RBP11.98□□□□□ -0.49
CASC3-204ENST00000474190 CPLX1O14810 134 aa11.97□□□□□ -0.49
CASC3-204ENST00000474190 DHX16O60231 1041 aaKnown RBP11.97□□□□□ -0.49
CASC3-204ENST00000474190 DEXIO95424 95 aa11.97□□□□□ -0.49
CASC3-204ENST00000474190 SLC25A27O95847 323 aa11.97□□□□□ -0.49
CASC3-204ENST00000474190 ALAS1P13196 640 aa11.97□□□□□ -0.49
CASC3-204ENST00000474190 PTPREP23469 700 aa11.97□□□□□ -0.49
CASC3-204ENST00000474190 CLK2P49760 499 aaKnown RBP11.97□□□□□ -0.49
CASC3-204ENST00000474190 HSD17B4P51659 736 aa11.97□□□□□ -0.49
CASC3-204ENST00000474190 SSRP1Q08945 709 aaKnown RBP11.97□□□□□ -0.49
CASC3-204ENST00000474190 PLS1Q14651 629 aa11.97□□□□□ -0.49
CASC3-204ENST00000474190 PIAS4Q8N2W9 510 aaPredicted RBP11.97□□□□□ -0.49
CASC3-204ENST00000474190 RGS22Q8NE09 1264 aa11.97□□□□□ -0.49
CASC3-204ENST00000474190 CHST13Q8NET6 341 aa11.97□□□□□ -0.49
CASC3-204ENST00000474190 SYTL5Q8TDW5 730 aaPredicted RBP11.97□□□□□ -0.49
CASC3-204ENST00000474190 TNFRSF25Q93038 417 aa11.97□□□□□ -0.49
CASC3-204ENST00000474190 INTS4Q96HW7 963 aaKnown RBP11.97□□□□□ -0.49
CASC3-204ENST00000474190 ZMYND12Q9H0C1 365 aa11.97□□□□□ -0.49
CASC3-204ENST00000474190 CYP39A1Q9NYL5 469 aa11.97□□□□□ -0.49
CASC3-204ENST00000474190 VPS54Q9P1Q0 977 aa11.97□□□□□ -0.49
CASC3-204ENST00000474190 GABRQQ9UN88 632 aa11.97□□□□□ -0.49
CASC3-204ENST00000474190 DDX49Q9Y6V7 483 aaKnown RBP11.97□□□□□ -0.49
CASC3-204ENST00000474190 BRCA2P51587 3418 aa11.97□□□□□ -0.49
CASC3-204ENST00000474190 ZSWIM8A7E2V4 1837 aa11.97□□□□□ -0.49
CASC3-204ENST00000474190 ABCB11O95342 1321 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 ESYT2A0FGR8 921 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 SOWAHBA6NEL2 793 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 FKTNO75072 461 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 ECM2O94769 699 aaPredicted RBP11.96□□□□□ -0.49
CASC3-204ENST00000474190 MAPK4P31152 587 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 DDIT3P35638 169 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 PSMC4P43686 418 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 SLC4A3P48751 1232 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 RPS6P62753 249 aaKnown RBP11.96□□□□□ -0.49
CASC3-204ENST00000474190 CNTN2Q02246 1040 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 ZNF792Q3KQV3 632 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 USP17L6PQ6QN14 398 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 HEATR3Q7Z4Q2 680 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 PLEKHH3Q7Z736 793 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 NCAPG2Q86XI2 1143 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 ABRAQ8N0Z2 381 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 FAM133AQ8N9E0 248 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 NPLOC4Q8TAT6 608 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 OXER1Q8TDS5 423 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 PHF20Q9BVI0 1012 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 MROH8Q9H579 483 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 ACAD9Q9H845 621 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 KCNJ14Q9UNX9 436 aa11.96□□□□□ -0.49
CASC3-204ENST00000474190 PIK3CDO00329 1044 aa11.95□□□□□ -0.5
CASC3-204ENST00000474190 CDKL5O76039 1030 aa11.95□□□□□ -0.5
CASC3-204ENST00000474190 PGK2P07205 417 aa11.95□□□□□ -0.5
CASC3-204ENST00000474190 HOXC6P09630 235 aa11.95□□□□□ -0.5
CASC3-204ENST00000474190 GJB2P29033 226 aa11.95□□□□□ -0.5
CASC3-204ENST00000474190 ADORA2AP29274 412 aa11.95□□□□□ -0.5
CASC3-204ENST00000474190 PRKCZQ05513 592 aa11.95□□□□□ -0.5
CASC3-204ENST00000474190 BAATQ14032 418 aaPredicted RBP11.95□□□□□ -0.5
CASC3-204ENST00000474190 EARS2Q5JPH6 523 aaKnown RBP11.95□□□□□ -0.5
CASC3-204ENST00000474190 PPP1R18Q6NYC8 613 aa11.95□□□□□ -0.5
CASC3-204ENST00000474190 CRYGNQ8WXF5 182 aa11.95□□□□□ -0.5
CASC3-204ENST00000474190 ALG1Q9BT22 464 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms