RNA–Protein interactions for RNA: ENST00000473949.5

ARF1-206, Transcript of ADP ribosylation factor 1, humanhuman

TSL 5

Gene ARF1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-206ENST00000473949 FRMPD2Q68DX3 1309 aaPredicted RBP24.45■■□□□ 1.5
ARF1-206ENST00000473949 CCDC171Q6TFL3 1326 aa24.45■■□□□ 1.5
ARF1-206ENST00000473949 A0A0U1RQG5 324 aaPredicted RBP24.45■■□□□ 1.5
ARF1-206ENST00000473949 TOP1P11387 765 aaKnown RBP24.45■■□□□ 1.5
ARF1-206ENST00000473949 NOVP48745 357 aa24.45■■□□□ 1.5
ARF1-206ENST00000473949 TTBK2Q6IQ55 1244 aa24.45■■□□□ 1.5
ARF1-206ENST00000473949 TICAM2Q86XR7 235 aa24.45■■□□□ 1.5
ARF1-206ENST00000473949 RWDD1Q9H446 243 aaPredicted RBP24.45■■□□□ 1.5
ARF1-206ENST00000473949 GPCPD1Q9NPB8 672 aa24.45■■□□□ 1.5
ARF1-206ENST00000473949 CYP39A1Q9NYL5 469 aa24.45■■□□□ 1.5
ARF1-206ENST00000473949 ICAM1P05362 532 aa24.44■■□□□ 1.5
ARF1-206ENST00000473949 EPHB4P54760 987 aa24.44■■□□□ 1.5
ARF1-206ENST00000473949 SMAD3P84022 425 aaKnown RBP24.44■■□□□ 1.5
ARF1-206ENST00000473949 BEX3Q00994 111 aa24.44■■□□□ 1.5
ARF1-206ENST00000473949 AAMPQ13685 434 aa24.44■■□□□ 1.5
ARF1-206ENST00000473949 SYDE2Q5VT97 1194 aa24.44■■□□□ 1.5
ARF1-206ENST00000473949 TMEM47Q9BQJ4 181 aa24.44■■□□□ 1.5
ARF1-206ENST00000473949 RANBP17Q9H2T7 1088 aaKnown RBP24.44■■□□□ 1.5
ARF1-206ENST00000473949 ZMYM6O95789 1325 aa24.43■■□□□ 1.5
ARF1-206ENST00000473949 ARVCFO00192 962 aa24.43■■□□□ 1.5
ARF1-206ENST00000473949 MFAP1P55081 439 aaKnown RBP24.43■■□□□ 1.5
ARF1-206ENST00000473949 MFSD6Q6ZSS7 791 aa24.43■■□□□ 1.5
ARF1-206ENST00000473949 EEPD1Q7L9B9 569 aa24.43■■□□□ 1.5
ARF1-206ENST00000473949 TLK2Q86UE8 772 aa24.43■■□□□ 1.5
ARF1-206ENST00000473949 AP5M1Q9H0R1 490 aa24.43■■□□□ 1.5
ARF1-206ENST00000473949 TCP11L1Q9NUJ3 509 aa24.43■■□□□ 1.5
ARF1-206ENST00000473949 DDX49Q9Y6V7 483 aaKnown RBP24.43■■□□□ 1.5
ARF1-206ENST00000473949 TIMP1P01033 207 aa24.42■■□□□ 1.5
ARF1-206ENST00000473949 FBXO16Q8IX29 292 aaPredicted RBP24.42■■□□□ 1.5
ARF1-206ENST00000473949 ASTN1O14525 1302 aa24.41■■□□□ 1.5
ARF1-206ENST00000473949 TLR3O15455 904 aaKnown RBP24.41■■□□□ 1.5
ARF1-206ENST00000473949 CDK7P50613 346 aa24.41■■□□□ 1.5
ARF1-206ENST00000473949 AKNAD1Q5T1N1 836 aa24.41■■□□□ 1.5
ARF1-206ENST00000473949 BTNL9Q6UXG8 535 aa24.41■■□□□ 1.5
ARF1-206ENST00000473949 SMC5Q8IY18 1101 aa24.41■■□□□ 1.5
ARF1-206ENST00000473949 TBX21Q9UL17 535 aa24.41■■□□□ 1.5
ARF1-206ENST00000473949 PTPDC1A2A3K4 754 aa24.4■■□□□ 1.5
ARF1-206ENST00000473949 CTAGE5O15320 804 aa24.4■■□□□ 1.5
ARF1-206ENST00000473949 DYNC1LI2O43237 492 aaPredicted RBP24.4■■□□□ 1.5
ARF1-206ENST00000473949 ZEB2O60315 1214 aa24.4■■□□□ 1.5
ARF1-206ENST00000473949 PDHBP11177 359 aa24.4■■□□□ 1.5
ARF1-206ENST00000473949 SDSP20132 328 aa24.4■■□□□ 1.5
ARF1-206ENST00000473949 BAATQ14032 418 aaPredicted RBP24.4■■□□□ 1.5
ARF1-206ENST00000473949 CXCL17Q6UXB2 119 aa24.4■■□□□ 1.5
ARF1-206ENST00000473949 CHD1LQ86WJ1 897 aa24.4■■□□□ 1.5
ARF1-206ENST00000473949 PURBQ96QR8 312 aaKnown RBP24.4■■□□□ 1.5
ARF1-206ENST00000473949 SEMA6BQ9H3T3 888 aa24.4■■□□□ 1.5
ARF1-206ENST00000473949 RNF41Q9H4P4 317 aaPredicted RBP24.4■■□□□ 1.5
ARF1-206ENST00000473949 PDGFCQ9NRA1 345 aa24.4■■□□□ 1.5
ARF1-206ENST00000473949 GNEQ9Y223 722 aaKnown RBP24.4■■□□□ 1.5
ARF1-206ENST00000473949 LAMA2P24043 3122 aaKnown RBP24.39■■□□□ 1.5
ARF1-206ENST00000473949 PCP11498 1178 aaKnown RBP24.39■■□□□ 1.49
ARF1-206ENST00000473949 SMPD1P17405 629 aa24.39■■□□□ 1.49
ARF1-206ENST00000473949 FSCN1Q16658 493 aaKnown RBP24.39■■□□□ 1.49
ARF1-206ENST00000473949 IQSEC1Q6DN90 963 aa24.39■■□□□ 1.49
ARF1-206ENST00000473949 TBC1D10CQ8IV04 446 aa24.39■■□□□ 1.49
ARF1-206ENST00000473949 CDX2Q99626 313 aaPredicted RBP24.39■■□□□ 1.49
ARF1-206ENST00000473949 ADD3Q9UEY8 706 aaKnown RBP24.39■■□□□ 1.49
ARF1-206ENST00000473949 LRRC37A2A6NM11 1700 aa24.38■■□□□ 1.49
ARF1-206ENST00000473949 NFIBO00712 420 aa24.38■■□□□ 1.49
ARF1-206ENST00000473949 PTGS1P23219 599 aa24.38■■□□□ 1.49
ARF1-206ENST00000473949 NKX3-2P78367 333 aa24.38■■□□□ 1.49
ARF1-206ENST00000473949 PPIGQ13427 754 aaKnown RBP eCLIP24.38■■□□□ 1.497e-10■□□□□ 8.4
ARF1-206ENST00000473949 MFSD5Q6N075 450 aa24.38■■□□□ 1.49
ARF1-206ENST00000473949 KIAA1211Q6ZU35 1233 aa24.38■■□□□ 1.49
ARF1-206ENST00000473949 PLEKHM2Q8IWE5 1019 aa24.38■■□□□ 1.49
ARF1-206ENST00000473949 FAM126BQ8IXS8 530 aa24.38■■□□□ 1.49
ARF1-206ENST00000473949 ESR2Q92731 530 aa24.38■■□□□ 1.49
ARF1-206ENST00000473949 TTC14Q96N46 770 aa24.38■■□□□ 1.49
ARF1-206ENST00000473949 PPP1R12CQ9BZL4 782 aa24.38■■□□□ 1.49
ARF1-206ENST00000473949 VTA1Q9NP79 307 aa24.38■■□□□ 1.49
ARF1-206ENST00000473949 ZNF213O14771 459 aa24.37■■□□□ 1.49
ARF1-206ENST00000473949 CABYRO75952 493 aa24.37■■□□□ 1.49
ARF1-206ENST00000473949 TAPT1Q6NXT6 567 aa24.37■■□□□ 1.49
ARF1-206ENST00000473949 CWC27Q6UX04 472 aaKnown RBP24.37■■□□□ 1.49
ARF1-206ENST00000473949 TMEM199Q8N511 208 aa24.37■■□□□ 1.49
ARF1-206ENST00000473949 ZKSCAN3Q9BRR0 538 aa24.37■■□□□ 1.49
ARF1-206ENST00000473949 DIAPH3Q9NSV4 1193 aa24.37■■□□□ 1.49
ARF1-206ENST00000473949 IGHDP01880 384 aa24.36■■□□□ 1.49
ARF1-206ENST00000473949 CALML3P27482 149 aa24.36■■□□□ 1.49
ARF1-206ENST00000473949 ALDH5A1P51649 535 aaPredicted RBP24.36■■□□□ 1.49
ARF1-206ENST00000473949 NUCB1Q02818 461 aa24.36■■□□□ 1.49
ARF1-206ENST00000473949 ZNF543Q08ER8 600 aa24.36■■□□□ 1.49
ARF1-206ENST00000473949 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.36■■□□□ 1.495e-9■■■■■ 30.7
ARF1-206ENST00000473949 TTYH1Q9H313 450 aaPredicted RBP24.36■■□□□ 1.49
ARF1-206ENST00000473949 PNMA2Q9UL42 364 aa24.36■■□□□ 1.49
ARF1-206ENST00000473949 NEDD4P46934 1319 aa24.35■■□□□ 1.49
ARF1-206ENST00000473949 LCTP09848 1927 aa24.35■■□□□ 1.49
ARF1-206ENST00000473949 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.35■■□□□ 1.49
ARF1-206ENST00000473949 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.35■■□□□ 1.49
ARF1-206ENST00000473949 CSF2RAP15509 400 aa24.35■■□□□ 1.49
ARF1-206ENST00000473949 ITGA7Q13683 1181 aa24.35■■□□□ 1.49
ARF1-206ENST00000473949 MORC4Q8TE76 937 aa24.35■■□□□ 1.49
ARF1-206ENST00000473949 MYLIPQ8WY64 445 aa24.35■■□□□ 1.49
ARF1-206ENST00000473949 Q9Y3F1 56 aa24.35■■□□□ 1.49
ARF1-206ENST00000473949 TMEM63BQ5T3F8 832 aa24.34■■□□□ 1.49
ARF1-206ENST00000473949 SLC30A10Q6XR72 485 aa24.34■■□□□ 1.49
ARF1-206ENST00000473949 RNF207Q6ZRF8 634 aa24.34■■□□□ 1.49
ARF1-206ENST00000473949 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.34■■□□□ 1.491e-7■□□□□ 10.8
ARF1-206ENST00000473949 EXOC6Q8TAG9 804 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms