RNA–Protein interactions for RNA: ENST00000473943.1

PHF20-209, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-209ENST00000473943 TNFAIP2Q03169 654 aa16.34■□□□□ 0.21
PHF20-209ENST00000473943 MUM1L1Q5H9M0 696 aa16.34■□□□□ 0.21
PHF20-209ENST00000473943 TBC1D10CQ8IV04 446 aa16.34■□□□□ 0.21
PHF20-209ENST00000473943 TMEM39AQ9NV64 488 aa16.34■□□□□ 0.21
PHF20-209ENST00000473943 PNMA2Q9UL42 364 aa16.34■□□□□ 0.21
PHF20-209ENST00000473943 SUPT16HQ9Y5B9 1047 aaKnown RBP16.34■□□□□ 0.21
PHF20-209ENST00000473943 MYADML2A6NDP7 307 aa16.33■□□□□ 0.2
PHF20-209ENST00000473943 ASGR1P07306 291 aa16.33■□□□□ 0.2
PHF20-209ENST00000473943 PDHBP11177 359 aa16.33■□□□□ 0.2
PHF20-209ENST00000473943 RAG1P15918 1043 aa16.33■□□□□ 0.2
PHF20-209ENST00000473943 NT5C2P49902 561 aa16.33■□□□□ 0.2
PHF20-209ENST00000473943 GJA9P57773 515 aa16.33■□□□□ 0.2
PHF20-209ENST00000473943 CCSAPQ6IQ19 270 aaPredicted RBP16.33■□□□□ 0.2
PHF20-209ENST00000473943 Q7L0L9 218 aa16.33■□□□□ 0.2
PHF20-209ENST00000473943 TOX2Q96NM4 488 aa16.33■□□□□ 0.2
PHF20-209ENST00000473943 KATNBL1Q9H079 304 aa16.33■□□□□ 0.2
PHF20-209ENST00000473943 UPF3AQ9H1J1 476 aaKnown RBP16.33■□□□□ 0.2
PHF20-209ENST00000473943 ELP1O95163 1332 aa16.33■□□□□ 0.2
PHF20-209ENST00000473943 KIAA0355O15063 1070 aa16.32■□□□□ 0.2
PHF20-209ENST00000473943 ADCY6O43306 1168 aa16.32■□□□□ 0.2
PHF20-209ENST00000473943 LAMA2P24043 3122 aaKnown RBP16.32■□□□□ 0.2
PHF20-209ENST00000473943 IRX5P78411 483 aaPredicted RBP16.32■□□□□ 0.2
PHF20-209ENST00000473943 ZNF543Q08ER8 600 aa16.32■□□□□ 0.2
PHF20-209ENST00000473943 SHHQ15465 462 aa16.32■□□□□ 0.2
PHF20-209ENST00000473943 CCDC178Q5BJE1 867 aa16.32■□□□□ 0.2
PHF20-209ENST00000473943 ANKRD33Q7Z3H0 272 aa16.32■□□□□ 0.2
PHF20-209ENST00000473943 IQCA1Q86XH1 822 aa16.32■□□□□ 0.2
PHF20-209ENST00000473943 DGKHQ86XP1 1220 aa16.32■□□□□ 0.2
PHF20-209ENST00000473943 AP5M1Q9H0R1 490 aa16.32■□□□□ 0.2
PHF20-209ENST00000473943 ADD3Q9UEY8 706 aaKnown RBP16.32■□□□□ 0.2
PHF20-209ENST00000473943 CTNNA3Q9UI47 895 aa16.32■□□□□ 0.2
PHF20-209ENST00000473943 NEDD4P46934 1319 aa16.31■□□□□ 0.2
PHF20-209ENST00000473943 MROH7Q68CQ1 1323 aa16.31■□□□□ 0.2
PHF20-209ENST00000473943 FAAP100Q0VG06 881 aa16.31■□□□□ 0.2
PHF20-209ENST00000473943 BAATQ14032 418 aaPredicted RBP16.31■□□□□ 0.2
PHF20-209ENST00000473943 IMMTQ16891 758 aaKnown RBP16.31■□□□□ 0.2
PHF20-209ENST00000473943 ZKSCAN3Q9BRR0 538 aa16.31■□□□□ 0.2
PHF20-209ENST00000473943 DSCC1Q9BVC3 393 aa16.31■□□□□ 0.2
PHF20-209ENST00000473943 MTMR10Q9NXD2 777 aa16.31■□□□□ 0.2
PHF20-209ENST00000473943 A0A0U1RQG5 324 aaPredicted RBP16.3■□□□□ 0.2
PHF20-209ENST00000473943 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.3■□□□□ 0.2
PHF20-209ENST00000473943 PTPDC1A2A3K4 754 aa16.3■□□□□ 0.2
PHF20-209ENST00000473943 KDM4AO75164 1064 aa16.3■□□□□ 0.2
PHF20-209ENST00000473943 C9orf50Q5SZB4 431 aa16.3■□□□□ 0.2
PHF20-209ENST00000473943 GPATCH4Q5T3I0 446 aaKnown RBP16.3■□□□□ 0.2
PHF20-209ENST00000473943 IQSEC1Q6DN90 963 aa16.3■□□□□ 0.2
PHF20-209ENST00000473943 EEPD1Q7L9B9 569 aa16.3■□□□□ 0.2
PHF20-209ENST00000473943 VTA1Q9NP79 307 aa16.3■□□□□ 0.2
PHF20-209ENST00000473943 COL6A3P12111 3177 aa16.29■□□□□ 0.2
PHF20-209ENST00000473943 ASTN1O14525 1302 aa16.29■□□□□ 0.2
PHF20-209ENST00000473943 ARVCFO00192 962 aa16.29■□□□□ 0.2
PHF20-209ENST00000473943 NFIBO00712 420 aa16.29■□□□□ 0.2
PHF20-209ENST00000473943 DYNC1LI2O43237 492 aaPredicted RBP16.29■□□□□ 0.2
PHF20-209ENST00000473943 ZEB2O60315 1214 aa16.29■□□□□ 0.2
PHF20-209ENST00000473943 SNHG28P0DPA3 235 aa16.29■□□□□ 0.2
PHF20-209ENST00000473943 ITGB8P26012 769 aa16.29■□□□□ 0.2
PHF20-209ENST00000473943 CALML3P27482 149 aa16.29■□□□□ 0.2
PHF20-209ENST00000473943 NKX3-2P78367 333 aa16.29■□□□□ 0.2
PHF20-209ENST00000473943 BEX3Q00994 111 aa16.29■□□□□ 0.2
PHF20-209ENST00000473943 FAM109BQ6ICB4 259 aaPredicted RBP16.29■□□□□ 0.2
PHF20-209ENST00000473943 KIAA1211Q6ZU35 1233 aa16.29■□□□□ 0.2
PHF20-209ENST00000473943 TLK2Q86UE8 772 aa16.29■□□□□ 0.2
PHF20-209ENST00000473943 FBXO16Q8IX29 292 aaPredicted RBP16.29■□□□□ 0.2
PHF20-209ENST00000473943 SLC17A8Q8NDX2 589 aa16.29■□□□□ 0.2
PHF20-209ENST00000473943 PURBQ96QR8 312 aaKnown RBP16.29■□□□□ 0.2
PHF20-209ENST00000473943 KAT14Q9H8E8 782 aa16.29■□□□□ 0.2
PHF20-209ENST00000473943 PDGFCQ9NRA1 345 aa16.29■□□□□ 0.2
PHF20-209ENST00000473943 GNEQ9Y223 722 aaKnown RBP16.29■□□□□ 0.2
PHF20-209ENST00000473943 DDX49Q9Y6V7 483 aaKnown RBP16.29■□□□□ 0.2
PHF20-209ENST00000473943 MCM3APO60318 1980 aa16.28■□□□□ 0.2
PHF20-209ENST00000473943 LOC102724159A0A0B4J2E5 919 aa16.28■□□□□ 0.2
PHF20-209ENST00000473943 B4E1Z4 1266 aa16.28■□□□□ 0.2
PHF20-209ENST00000473943 TLR3O15455 904 aaKnown RBP16.28■□□□□ 0.2
PHF20-209ENST00000473943 CABYRO75952 493 aa16.28■□□□□ 0.2
PHF20-209ENST00000473943 GOLGA8HP0CJ92 632 aa16.28■□□□□ 0.2
PHF20-209ENST00000473943 SMPD1P17405 629 aa16.28■□□□□ 0.2
PHF20-209ENST00000473943 CDK7P50613 346 aa16.28■□□□□ 0.2
PHF20-209ENST00000473943 FPGSQ05932 587 aa16.28■□□□□ 0.2
PHF20-209ENST00000473943 PWP2Q15269 919 aaKnown RBP16.28■□□□□ 0.2
PHF20-209ENST00000473943 FSCN1Q16658 493 aaKnown RBP16.28■□□□□ 0.2
PHF20-209ENST00000473943 TAPT1Q6NXT6 567 aa16.28■□□□□ 0.2
PHF20-209ENST00000473943 RNF207Q6ZRF8 634 aa16.28■□□□□ 0.2
PHF20-209ENST00000473943 PNMA1Q8ND90 353 aa16.28■□□□□ 0.2
PHF20-209ENST00000473943 ZSCAN10Q96SZ4 725 aaPredicted RBP16.28■□□□□ 0.2
PHF20-209ENST00000473943 MPHOSPH6Q99547 160 aaKnown RBP16.28■□□□□ 0.2
PHF20-209ENST00000473943 KRT23Q9C075 422 aa16.28■□□□□ 0.2
PHF20-209ENST00000473943 STXBP5LQ9Y2K9 1186 aa16.28■□□□□ 0.2
PHF20-209ENST00000473943 Q9Y3F1 56 aa16.28■□□□□ 0.2
PHF20-209ENST00000473943 WDR19Q8NEZ3 1342 aa16.27■□□□□ 0.2
PHF20-209ENST00000473943 CTAGE5O15320 804 aa16.27■□□□□ 0.2
PHF20-209ENST00000473943 TIMP1P01033 207 aa16.27■□□□□ 0.2
PHF20-209ENST00000473943 ALDH5A1P51649 535 aaPredicted RBP16.27■□□□□ 0.2
PHF20-209ENST00000473943 CXCL17Q6UXB2 119 aa16.27■□□□□ 0.2
PHF20-209ENST00000473943 MORC4Q8TE76 937 aa16.27■□□□□ 0.2
PHF20-209ENST00000473943 CLEC4DQ8WXI8 215 aa16.27■□□□□ 0.2
PHF20-209ENST00000473943 ANKS1AQ92625 1134 aa16.27■□□□□ 0.2
PHF20-209ENST00000473943 UBA5Q9GZZ9 404 aa16.27■□□□□ 0.2
PHF20-209ENST00000473943 CNNM2Q9H8M5 875 aa16.27■□□□□ 0.2
PHF20-209ENST00000473943 ZSWIM5Q9P217 1185 aa16.27■□□□□ 0.2
PHF20-209ENST00000473943 LTBP2Q14767 1821 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms