RNA–Protein interactions for RNA: ENST00000473798.1

LINC00115-201, long intergenic non-protein coding RNA 115, humanhuman

BASIC

Gene LINC00115, Length 1,317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00115-201ENST00000473798 HERVK_113P62684 666 aa16.4■□□□□ 0.22
LINC00115-201ENST00000473798 PABPC4Q13310 644 aaKnown RBP eCLIP16.4■□□□□ 0.22
LINC00115-201ENST00000473798 PLS1Q14651 629 aa16.4■□□□□ 0.22
LINC00115-201ENST00000473798 TMEM132BQ14DG7 1078 aa16.4■□□□□ 0.22
LINC00115-201ENST00000473798 EARS2Q5JPH6 523 aaKnown RBP16.4■□□□□ 0.22
LINC00115-201ENST00000473798 CYP4F22Q6NT55 531 aa16.4■□□□□ 0.22
LINC00115-201ENST00000473798 NOSTRINQ8IVI9 506 aa16.4■□□□□ 0.22
LINC00115-201ENST00000473798 FAM43AQ8N2R8 423 aa16.4■□□□□ 0.22
LINC00115-201ENST00000473798 RGS22Q8NE09 1264 aa16.4■□□□□ 0.22
LINC00115-201ENST00000473798 PAGR1Q9BTK6 254 aa16.4■□□□□ 0.22
LINC00115-201ENST00000473798 ZSCAN16Q9H4T2 348 aaPredicted RBP16.4■□□□□ 0.22
LINC00115-201ENST00000473798 PSTPIP2Q9H939 334 aa16.4■□□□□ 0.22
LINC00115-201ENST00000473798 BIN2Q9UBW5 565 aaPredicted RBP16.4■□□□□ 0.22
LINC00115-201ENST00000473798 PARP14Q460N5 1801 aa16.39■□□□□ 0.21
LINC00115-201ENST00000473798 MYPNQ86TC9 1320 aa16.39■□□□□ 0.21
LINC00115-201ENST00000473798 ESYT2A0FGR8 921 aa16.39■□□□□ 0.21
LINC00115-201ENST00000473798 OPLAHO14841 1288 aa16.39■□□□□ 0.21
LINC00115-201ENST00000473798 NCLP19338 710 aaKnown RBP16.39■□□□□ 0.21
LINC00115-201ENST00000473798 DNM1Q05193 864 aaKnown RBP16.39■□□□□ 0.21
LINC00115-201ENST00000473798 JAKMIP3Q5VZ66 844 aa16.39■□□□□ 0.21
LINC00115-201ENST00000473798 ANKRD23Q86SG2 305 aa16.39■□□□□ 0.21
LINC00115-201ENST00000473798 DAGLBQ8NCG7 672 aa16.39■□□□□ 0.21
LINC00115-201ENST00000473798 TNFRSF25Q93038 417 aa16.39■□□□□ 0.21
LINC00115-201ENST00000473798 CCDC102AQ96A19 550 aa16.39■□□□□ 0.21
LINC00115-201ENST00000473798 ZIC5Q96T25 663 aa16.39■□□□□ 0.21
LINC00115-201ENST00000473798 FOXP1Q9H334 677 aaPredicted RBP16.39■□□□□ 0.21
LINC00115-201ENST00000473798 RIC8AQ9NPQ8 531 aa16.39■□□□□ 0.21
LINC00115-201ENST00000473798 BTBD7Q9P203 1132 aa16.39■□□□□ 0.21
LINC00115-201ENST00000473798 TFIP11Q9UBB9 837 aaKnown RBP16.39■□□□□ 0.21
LINC00115-201ENST00000473798 PCDHA6Q9UN73 950 aa16.39■□□□□ 0.21
LINC00115-201ENST00000473798 PCDHA8Q9Y5H6 950 aa16.39■□□□□ 0.21
LINC00115-201ENST00000473798 ABCB11O95342 1321 aa16.38■□□□□ 0.21
LINC00115-201ENST00000473798 MANSC4A6NHS7 340 aaPredicted RBP16.38■□□□□ 0.21
LINC00115-201ENST00000473798 ABCB7O75027 752 aa16.38■□□□□ 0.21
LINC00115-201ENST00000473798 BAG4O95429 457 aaKnown RBP16.38■□□□□ 0.21
LINC00115-201ENST00000473798 FDX1P10109 184 aa16.38■□□□□ 0.21
LINC00115-201ENST00000473798 ATP2B1P20020 1258 aa16.38■□□□□ 0.21
LINC00115-201ENST00000473798 GNA11P29992 359 aa16.38■□□□□ 0.21
LINC00115-201ENST00000473798 APLP1P51693 650 aa16.38■□□□□ 0.21
LINC00115-201ENST00000473798 MUM1L1Q5H9M0 696 aa16.38■□□□□ 0.21
LINC00115-201ENST00000473798 SNRNP48Q6IEG0 339 aaKnown RBP16.38■□□□□ 0.21
LINC00115-201ENST00000473798 GALNT17Q6IS24 598 aa16.38■□□□□ 0.21
LINC00115-201ENST00000473798 USP17L6PQ6QN14 398 aa16.38■□□□□ 0.21
LINC00115-201ENST00000473798 PIK3AP1Q6ZUJ8 805 aa16.38■□□□□ 0.21
LINC00115-201ENST00000473798 BRAPQ7Z569 592 aa16.38■□□□□ 0.21
LINC00115-201ENST00000473798 FAM177A1Q8N128 213 aaPredicted RBP16.38■□□□□ 0.21
LINC00115-201ENST00000473798 TBC1D5Q92609 795 aa16.38■□□□□ 0.21
LINC00115-201ENST00000473798 CUL5Q93034 780 aa16.38■□□□□ 0.21
LINC00115-201ENST00000473798 PGBD1Q96JS3 809 aa16.38■□□□□ 0.21
LINC00115-201ENST00000473798 ZNF214Q9UL59 606 aaPredicted RBP16.38■□□□□ 0.21
LINC00115-201ENST00000473798 MRPL11Q9Y3B7 192 aaKnown RBP16.38■□□□□ 0.21
LINC00115-201ENST00000473798 RIPK3Q9Y572 518 aa16.38■□□□□ 0.21
LINC00115-201ENST00000473798 SMCHD1A6NHR9 2005 aa16.38■□□□□ 0.21
LINC00115-201ENST00000473798 M0R2N6 131 aa16.37■□□□□ 0.21
LINC00115-201ENST00000473798 IGF2BP3O00425 579 aaKnown RBP eCLIP16.37■□□□□ 0.21
LINC00115-201ENST00000473798 NFIBO00712 420 aa16.37■□□□□ 0.21
LINC00115-201ENST00000473798 CNMDO75829 334 aa16.37■□□□□ 0.21
LINC00115-201ENST00000473798 HOXA13P31271 388 aaPredicted RBP16.37■□□□□ 0.21
LINC00115-201ENST00000473798 MRPL12P52815 198 aaKnown RBP16.37■□□□□ 0.21
LINC00115-201ENST00000473798 CEBPZQ03701 1054 aaKnown RBP16.37■□□□□ 0.21
LINC00115-201ENST00000473798 TRAF1Q13077 416 aa16.37■□□□□ 0.21
LINC00115-201ENST00000473798 LBX2Q6XYB7 198 aa16.37■□□□□ 0.21
LINC00115-201ENST00000473798 REXO1Q8N1G1 1221 aaKnown RBP16.37■□□□□ 0.21
LINC00115-201ENST00000473798 BICD2Q8TD16 824 aa16.37■□□□□ 0.21
LINC00115-201ENST00000473798 CLEC4DQ8WXI8 215 aa16.37■□□□□ 0.21
LINC00115-201ENST00000473798 TRERF1Q96PN7 1200 aa16.37■□□□□ 0.21
LINC00115-201ENST00000473798 FTOQ9C0B1 505 aaKnown RBP eCLIP16.37■□□□□ 0.21
LINC00115-201ENST00000473798 TXNRD2Q9NNW7 524 aa16.37■□□□□ 0.21
LINC00115-201ENST00000473798 CREBZFQ9NS37 354 aa16.37■□□□□ 0.21
LINC00115-201ENST00000473798 PNMA3Q9UL41 463 aa16.37■□□□□ 0.21
LINC00115-201ENST00000473798 CNPY2Q9Y2B0 182 aa16.37■□□□□ 0.21
LINC00115-201ENST00000473798 ATP6V1DQ9Y5K8 247 aa16.37■□□□□ 0.21
LINC00115-201ENST00000473798 TESPA1A2RU30 521 aaPredicted RBP16.36■□□□□ 0.21
LINC00115-201ENST00000473798 CFBP00751 764 aa16.36■□□□□ 0.21
LINC00115-201ENST00000473798 STAT3P40763 770 aa16.36■□□□□ 0.21
LINC00115-201ENST00000473798 HTRA3P83110 453 aa16.36■□□□□ 0.21
LINC00115-201ENST00000473798 NBR1Q14596 966 aa16.36■□□□□ 0.21
LINC00115-201ENST00000473798 MYSM1Q5VVJ2 828 aa16.36■□□□□ 0.21
LINC00115-201ENST00000473798 MB21D1Q8N884 522 aa16.36■□□□□ 0.21
LINC00115-201ENST00000473798 SMCR8Q8TEV9 937 aaPredicted RBP16.36■□□□□ 0.21
LINC00115-201ENST00000473798 HHIPL1Q96JK4 782 aa16.36■□□□□ 0.21
LINC00115-201ENST00000473798 TEX13BQ9BXU2 312 aa16.36■□□□□ 0.21
LINC00115-201ENST00000473798 RNF146Q9NTX7 359 aa16.36■□□□□ 0.21
LINC00115-201ENST00000473798 RBPJLQ9UBG7 517 aa16.36■□□□□ 0.21
LINC00115-201ENST00000473798 SLC45A1Q9Y2W3 748 aa16.36■□□□□ 0.21
LINC00115-201ENST00000473798 COL11A1P12107 1806 aaPredicted RBP16.36■□□□□ 0.21
LINC00115-201ENST00000473798 CCDC194A0A1B0GVG4 234 aa16.35■□□□□ 0.21
LINC00115-201ENST00000473798 MEIS2O14770 477 aa16.35■□□□□ 0.21
LINC00115-201ENST00000473798 AOC2O75106 756 aa16.35■□□□□ 0.21
LINC00115-201ENST00000473798 OAZ1P54368 228 aa16.35■□□□□ 0.21
LINC00115-201ENST00000473798 DEFB115Q30KQ5 88 aa16.35■□□□□ 0.21
LINC00115-201ENST00000473798 FCHSD1Q86WN1 690 aa16.35■□□□□ 0.21
LINC00115-201ENST00000473798 CAPNS2Q96L46 248 aa16.35■□□□□ 0.21
LINC00115-201ENST00000473798 GDPD2Q9HCC8 539 aa16.35■□□□□ 0.21
LINC00115-201ENST00000473798 GCOM1H8Y6P7 765 aaPredicted RBP16.34■□□□□ 0.21
LINC00115-201ENST00000473798 ATP2A1O14983 1001 aa16.34■□□□□ 0.21
LINC00115-201ENST00000473798 FIBPO43427 364 aa16.34■□□□□ 0.21
LINC00115-201ENST00000473798 POLR2MP0CAP2 368 aa16.34■□□□□ 0.21
LINC00115-201ENST00000473798 CLK2P49760 499 aaKnown RBP16.34■□□□□ 0.21
LINC00115-201ENST00000473798 TOB1P50616 345 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms