RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 GOLIM4O00461 696 aa19.48■□□□□ 0.71
HPS4-210ENST00000473782 HERC6Q8IVU3 1022 aa19.48■□□□□ 0.71
HPS4-210ENST00000473782 FAM178BQ8IXR5 827 aa19.48■□□□□ 0.71
HPS4-210ENST00000473782 FRAT1Q92837 279 aaPredicted RBP19.48■□□□□ 0.71
HPS4-210ENST00000473782 SLC9A7Q96T83 725 aa19.48■□□□□ 0.71
HPS4-210ENST00000473782 NYAP2Q9P242 653 aa19.48■□□□□ 0.71
HPS4-210ENST00000473782 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.47■□□□□ 0.71
HPS4-210ENST00000473782 ZBED4O75132 1171 aa19.47■□□□□ 0.71
HPS4-210ENST00000473782 ADD2P35612 726 aa19.47■□□□□ 0.71
HPS4-210ENST00000473782 NHLH1Q02575 133 aa19.47■□□□□ 0.71
HPS4-210ENST00000473782 NOL8Q76FK4 1167 aaKnown RBP19.47■□□□□ 0.71
HPS4-210ENST00000473782 KIFC2Q96AC6 838 aa19.47■□□□□ 0.71
HPS4-210ENST00000473782 FBXO40Q9UH90 709 aa19.47■□□□□ 0.71
HPS4-210ENST00000473782 EXOC6BQ9Y2D4 811 aa19.47■□□□□ 0.71
HPS4-210ENST00000473782 LCHNA4D1U4 455 aa19.46■□□□□ 0.71
HPS4-210ENST00000473782 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.46■□□□□ 0.71
HPS4-210ENST00000473782 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.46■□□□□ 0.71
HPS4-210ENST00000473782 A1CFQ9NQ94 594 aaKnown RBP19.46■□□□□ 0.71
HPS4-210ENST00000473782 Q9Y3F1 56 aa19.46■□□□□ 0.71
HPS4-210ENST00000473782 IGKV6D-41A0A0C4DH26 115 aa19.45■□□□□ 0.7
HPS4-210ENST00000473782 RASA1P20936 1047 aa19.45■□□□□ 0.7
HPS4-210ENST00000473782 OAZ1P54368 228 aa19.45■□□□□ 0.7
HPS4-210ENST00000473782 GJD3Q8N144 294 aa19.45■□□□□ 0.7
HPS4-210ENST00000473782 IL1RAPL2Q9NP60 686 aa19.45■□□□□ 0.7
HPS4-210ENST00000473782 COL4A4P53420 1690 aaPredicted RBP19.45■□□□□ 0.7
HPS4-210ENST00000473782 ZNF536O15090 1300 aa19.45■□□□□ 0.7
HPS4-210ENST00000473782 TNKSO95271 1327 aa19.45■□□□□ 0.7
HPS4-210ENST00000473782 TET1Q8NFU7 2136 aa19.45■□□□□ 0.7
HPS4-210ENST00000473782 RBAK-RBAKDNI3L0D1 243 aa19.44■□□□□ 0.7
HPS4-210ENST00000473782 IQCF3P0C7M6 154 aa19.44■□□□□ 0.7
HPS4-210ENST00000473782 FBXL18Q96ME1 805 aa19.44■□□□□ 0.7
HPS4-210ENST00000473782 DNAJC2Q99543 621 aaKnown RBP19.44■□□□□ 0.7
HPS4-210ENST00000473782 AP5M1Q9H0R1 490 aa19.44■□□□□ 0.7
HPS4-210ENST00000473782 HOMER2Q9NSB8 354 aa19.44■□□□□ 0.7
HPS4-210ENST00000473782 USP34Q70CQ2 3546 aa19.43■□□□□ 0.7
HPS4-210ENST00000473782 ZEB2O60315 1214 aa19.43■□□□□ 0.7
HPS4-210ENST00000473782 GPNMBQ14956 572 aa19.43■□□□□ 0.7
HPS4-210ENST00000473782 IQSEC1Q6DN90 963 aa19.43■□□□□ 0.7
HPS4-210ENST00000473782 CEP85Q6P2H3 762 aa19.43■□□□□ 0.7
HPS4-210ENST00000473782 FBXO16Q8IX29 292 aaPredicted RBP19.43■□□□□ 0.7
HPS4-210ENST00000473782 GDPD5Q8WTR4 605 aa19.43■□□□□ 0.7
HPS4-210ENST00000473782 MKL1Q969V6 931 aa19.43■□□□□ 0.7
HPS4-210ENST00000473782 UBE2ZQ9H832 354 aaPredicted RBP19.43■□□□□ 0.7
HPS4-210ENST00000473782 LMCD1Q9NZU5 365 aa19.43■□□□□ 0.7
HPS4-210ENST00000473782 PTPRSQ13332 1948 aa19.43■□□□□ 0.7
HPS4-210ENST00000473782 ASB14A6NK59 587 aa19.42■□□□□ 0.7
HPS4-210ENST00000473782 SUPT20HL2P0C7V6 817 aa19.42■□□□□ 0.7
HPS4-210ENST00000473782 IL9P15248 144 aa19.42■□□□□ 0.7
HPS4-210ENST00000473782 PURAQ00577 322 aaKnown RBP19.42■□□□□ 0.7
HPS4-210ENST00000473782 LEXMQ3ZCV2 418 aa19.42■□□□□ 0.7
HPS4-210ENST00000473782 EEPD1Q7L9B9 569 aa19.42■□□□□ 0.7
HPS4-210ENST00000473782 TMCO2Q7Z6W1 182 aaPredicted RBP19.42■□□□□ 0.7
HPS4-210ENST00000473782 PPP1R13LQ8WUF5 828 aa19.42■□□□□ 0.7
HPS4-210ENST00000473782 ANKS1AQ92625 1134 aa19.42■□□□□ 0.7
HPS4-210ENST00000473782 PURBQ96QR8 312 aaKnown RBP19.42■□□□□ 0.7
HPS4-210ENST00000473782 CLIP2Q9UDT6 1046 aa19.42■□□□□ 0.7
HPS4-210ENST00000473782 FEM1BQ9UK73 627 aa19.42■□□□□ 0.7
HPS4-210ENST00000473782 TRIOO75962 3097 aa19.41■□□□□ 0.7
HPS4-210ENST00000473782 POTEB3A0JP26 581 aa19.41■□□□□ 0.7
HPS4-210ENST00000473782 RLBP1P12271 317 aa19.41■□□□□ 0.7
HPS4-210ENST00000473782 ACTN1P12814 892 aa19.41■□□□□ 0.7
HPS4-210ENST00000473782 RFC2P35250 354 aa19.41■□□□□ 0.7
HPS4-210ENST00000473782 POTEBQ6S5H4 581 aa19.41■□□□□ 0.7
HPS4-210ENST00000473782 RHPN1Q8TCX5 695 aa19.41■□□□□ 0.7
HPS4-210ENST00000473782 MORC4Q8TE76 937 aa19.41■□□□□ 0.7
HPS4-210ENST00000473782 PUS7LQ9H0K6 701 aaKnown RBP19.41■□□□□ 0.7
HPS4-210ENST00000473782 ACAD9Q9H845 621 aa19.41■□□□□ 0.7
HPS4-210ENST00000473782 SUGCTQ9HAC7 445 aa19.41■□□□□ 0.7
HPS4-210ENST00000473782 SLC4A4Q9Y6R1 1079 aa19.41■□□□□ 0.7
HPS4-210ENST00000473782 RNF146Q9NTX7 359 aa19.4■□□□□ 0.7
HPS4-210ENST00000473782 KIF28PB7ZC32 967 aa19.39■□□□□ 0.69
HPS4-210ENST00000473782 PITPNM1O00562 1244 aa19.39■□□□□ 0.69
HPS4-210ENST00000473782 TCTN1Q2MV58 587 aa19.39■□□□□ 0.69
HPS4-210ENST00000473782 DUSP28Q4G0W2 176 aa19.39■□□□□ 0.69
HPS4-210ENST00000473782 SBK1Q52WX2 424 aa19.39■□□□□ 0.69
HPS4-210ENST00000473782 ZKSCAN2Q63HK3 967 aa19.39■□□□□ 0.69
HPS4-210ENST00000473782 ERC1Q8IUD2 1116 aa19.39■□□□□ 0.69
HPS4-210ENST00000473782 STK11IPQ8N1F8 1099 aa19.39■□□□□ 0.69
HPS4-210ENST00000473782 PAG1Q9NWQ8 432 aa19.39■□□□□ 0.69
HPS4-210ENST00000473782 CTDP1Q9Y5B0 961 aaPredicted RBP19.39■□□□□ 0.69
HPS4-210ENST00000473782 ZNF318Q5VUA4 2279 aa19.39■□□□□ 0.69
HPS4-210ENST00000473782 LCTP09848 1927 aa19.38■□□□□ 0.69
HPS4-210ENST00000473782 UBE3CQ15386 1083 aa19.38■□□□□ 0.69
HPS4-210ENST00000473782 NBPF20Q3BBV1 942 aa19.38■□□□□ 0.69
HPS4-210ENST00000473782 MUM1L1Q5H9M0 696 aa19.38■□□□□ 0.69
HPS4-210ENST00000473782 KIAA1211Q6ZU35 1233 aa19.38■□□□□ 0.69
HPS4-210ENST00000473782 AMOTL1Q8IY63 956 aa19.38■□□□□ 0.69
HPS4-210ENST00000473782 GMCL1P1Q8NEA9 526 aa19.38■□□□□ 0.69
HPS4-210ENST00000473782 CEP95Q96GE4 821 aa19.38■□□□□ 0.69
HPS4-210ENST00000473782 UIMC1Q96RL1 719 aa19.38■□□□□ 0.69
HPS4-210ENST00000473782 CTAGE1Q96RT6 745 aa19.38■□□□□ 0.69
HPS4-210ENST00000473782 MTMR4Q9NYA4 1195 aa19.38■□□□□ 0.69
HPS4-210ENST00000473782 CYP39A1Q9NYL5 469 aa19.38■□□□□ 0.69
HPS4-210ENST00000473782 COG6Q9Y2V7 657 aa19.38■□□□□ 0.69
HPS4-210ENST00000473782 SCN10AQ9Y5Y9 1956 aa19.38■□□□□ 0.69
HPS4-210ENST00000473782 GRXCR2A6NFK2 248 aa19.37■□□□□ 0.69
HPS4-210ENST00000473782 BAIAP3O94812 1187 aa19.37■□□□□ 0.69
HPS4-210ENST00000473782 ALADP13716 330 aa19.37■□□□□ 0.69
HPS4-210ENST00000473782 KCNA5P22460 613 aa19.37■□□□□ 0.69
HPS4-210ENST00000473782 WDR5P61964 334 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms