RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 PLEKHA8P1O95397 391 aa10.54□□□□□ -0.72
SMG5-203ENST00000473643 IGHA2P01877 340 aa10.54□□□□□ -0.72
SMG5-203ENST00000473643 RGS2P41220 211 aa10.54□□□□□ -0.72
SMG5-203ENST00000473643 TRIM32Q13049 653 aa10.54□□□□□ -0.72
SMG5-203ENST00000473643 MAP2K5Q13163 448 aa10.54□□□□□ -0.72
SMG5-203ENST00000473643 GRB14Q14449 540 aa10.54□□□□□ -0.72
SMG5-203ENST00000473643 CCDC96Q2M329 555 aa10.54□□□□□ -0.72
SMG5-203ENST00000473643 TTBK2Q6IQ55 1244 aa10.54□□□□□ -0.72
SMG5-203ENST00000473643 KCTD1Q719H9 257 aa10.54□□□□□ -0.72
SMG5-203ENST00000473643 ATG4CQ96DT6 458 aa10.54□□□□□ -0.72
SMG5-203ENST00000473643 DEFB118Q96PH6 123 aa10.54□□□□□ -0.72
SMG5-203ENST00000473643 NUP88Q99567 741 aaPredicted RBP10.54□□□□□ -0.72
SMG5-203ENST00000473643 RNF26Q9BY78 433 aaPredicted RBP10.54□□□□□ -0.72
SMG5-203ENST00000473643 UBA5Q9GZZ9 404 aa10.54□□□□□ -0.72
SMG5-203ENST00000473643 GPCPD1Q9NPB8 672 aa10.54□□□□□ -0.72
SMG5-203ENST00000473643 FBXO28Q9NVF7 368 aa10.54□□□□□ -0.72
SMG5-203ENST00000473643 MTMR7Q9Y216 660 aa10.54□□□□□ -0.72
SMG5-203ENST00000473643 FRMPD2Q68DX3 1309 aaPredicted RBP10.54□□□□□ -0.72
SMG5-203ENST00000473643 MGAMO43451 1857 aa10.53□□□□□ -0.72
SMG5-203ENST00000473643 VWA5AO00534 786 aa10.53□□□□□ -0.72
SMG5-203ENST00000473643 RAD21O60216 631 aa10.53□□□□□ -0.72
SMG5-203ENST00000473643 FDX1P10109 184 aa10.53□□□□□ -0.72
SMG5-203ENST00000473643 FDPSP14324 419 aaKnown RBP10.53□□□□□ -0.72
SMG5-203ENST00000473643 ERCC3P19447 782 aa10.53□□□□□ -0.72
SMG5-203ENST00000473643 STAT2P52630 851 aa10.53□□□□□ -0.72
SMG5-203ENST00000473643 HMGN5P82970 282 aaKnown RBP10.53□□□□□ -0.72
SMG5-203ENST00000473643 TMEM132BQ14DG7 1078 aa10.53□□□□□ -0.72
SMG5-203ENST00000473643 CCL14Q16627 93 aa10.53□□□□□ -0.72
SMG5-203ENST00000473643 SYDE2Q5VT97 1194 aa10.53□□□□□ -0.72
SMG5-203ENST00000473643 PRPF38AQ8NAV1 312 aaKnown RBP10.53□□□□□ -0.72
SMG5-203ENST00000473643 APBA2Q99767 749 aa10.53□□□□□ -0.72
SMG5-203ENST00000473643 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMG5-203ENST00000473643 MROH8Q9H579 483 aa10.53□□□□□ -0.72
SMG5-203ENST00000473643 JMJD4Q9H9V9 463 aa10.53□□□□□ -0.72
SMG5-203ENST00000473643 HMX1Q9NP08 348 aaPredicted RBP10.53□□□□□ -0.72
SMG5-203ENST00000473643 RBM27Q9P2N5 1060 aaKnown RBP10.53□□□□□ -0.72
SMG5-203ENST00000473643 PPP1R9AQ9ULJ8 1098 aa10.53□□□□□ -0.72
SMG5-203ENST00000473643 PRR12Q9ULL5 1215 aa10.53□□□□□ -0.72
SMG5-203ENST00000473643 CNTNAP5Q8WYK1 1306 aa10.53□□□□□ -0.72
SMG5-203ENST00000473643 STK36Q9NRP7 1315 aa10.53□□□□□ -0.72
SMG5-203ENST00000473643 RANBP2P49792 3224 aaKnown RBP10.52□□□□□ -0.72
SMG5-203ENST00000473643 RBBP6Q7Z6E9 1792 aaKnown RBP10.52□□□□□ -0.72
SMG5-203ENST00000473643 PTPDC1A2A3K4 754 aa10.52□□□□□ -0.73
SMG5-203ENST00000473643 JAK2O60674 1132 aa10.52□□□□□ -0.73
SMG5-203ENST00000473643 DEXIO95424 95 aa10.52□□□□□ -0.73
SMG5-203ENST00000473643 SLC25A27O95847 323 aa10.52□□□□□ -0.73
SMG5-203ENST00000473643 TFRCP02786 760 aaKnown RBP10.52□□□□□ -0.73
SMG5-203ENST00000473643 PRKAR2AP13861 404 aaKnown RBP10.52□□□□□ -0.73
SMG5-203ENST00000473643 SLC16A2P36021 539 aa10.52□□□□□ -0.73
SMG5-203ENST00000473643 CACNB2Q08289 660 aaPredicted RBP10.52□□□□□ -0.73
SMG5-203ENST00000473643 SSRP1Q08945 709 aaKnown RBP10.52□□□□□ -0.73
SMG5-203ENST00000473643 TRIM22Q8IYM9 498 aa10.52□□□□□ -0.73
SMG5-203ENST00000473643 ADGRF4Q8IZF3 695 aa10.52□□□□□ -0.73
SMG5-203ENST00000473643 ABRAQ8N0Z2 381 aa10.52□□□□□ -0.73
SMG5-203ENST00000473643 CMTR1Q8N1G2 835 aaKnown RBP10.52□□□□□ -0.73
SMG5-203ENST00000473643 RGS22Q8NE09 1264 aa10.52□□□□□ -0.73
SMG5-203ENST00000473643 REPS2Q8NFH8 660 aa10.52□□□□□ -0.73
SMG5-203ENST00000473643 IPO9Q96P70 1041 aaKnown RBP10.52□□□□□ -0.73
SMG5-203ENST00000473643 SLF1Q9BQI6 1058 aa10.52□□□□□ -0.73
SMG5-203ENST00000473643 RANBP17Q9H2T7 1088 aaKnown RBP10.52□□□□□ -0.73
SMG5-203ENST00000473643 CPVLQ9H3G5 476 aa10.52□□□□□ -0.73
SMG5-203ENST00000473643 IVNS1ABPQ9Y6Y0 642 aa10.52□□□□□ -0.73
SMG5-203ENST00000473643 V9GY48 417 aaPredicted RBP10.52□□□□□ -0.73
SMG5-203ENST00000473643 CEP290O15078 2479 aa10.52□□□□□ -0.73
SMG5-203ENST00000473643 COBLO75128 1261 aa10.51□□□□□ -0.73
SMG5-203ENST00000473643 STAT3P40763 770 aa10.51□□□□□ -0.73
SMG5-203ENST00000473643 PKN1Q16512 942 aa10.51□□□□□ -0.73
SMG5-203ENST00000473643 WDR78Q5VTH9 848 aa10.51□□□□□ -0.73
SMG5-203ENST00000473643 RIOX2Q8IUF8 465 aa10.51□□□□□ -0.73
SMG5-203ENST00000473643 FAM177A1Q8N128 213 aaPredicted RBP10.51□□□□□ -0.73
SMG5-203ENST00000473643 CCDC82Q8N4S0 544 aa10.51□□□□□ -0.73
SMG5-203ENST00000473643 NPLOC4Q8TAT6 608 aa10.51□□□□□ -0.73
SMG5-203ENST00000473643 PHKBQ93100 1093 aa10.51□□□□□ -0.73
SMG5-203ENST00000473643 RRP36Q96EU6 259 aaKnown RBP10.51□□□□□ -0.73
SMG5-203ENST00000473643 PIGSQ96S52 555 aa10.51□□□□□ -0.73
SMG5-203ENST00000473643 SLC26A6Q9BXS9 759 aa10.51□□□□□ -0.73
SMG5-203ENST00000473643 CWC22Q9HCG8 908 aaKnown RBP10.51□□□□□ -0.73
SMG5-203ENST00000473643 FLRT1Q9NZU1 646 aa10.51□□□□□ -0.73
SMG5-203ENST00000473643 ORC3Q9UBD5 711 aaPredicted RBP10.51□□□□□ -0.73
SMG5-203ENST00000473643 ZNF214Q9UL59 606 aaPredicted RBP10.51□□□□□ -0.73
SMG5-203ENST00000473643 OGDHLQ9ULD0 1010 aa10.51□□□□□ -0.73
SMG5-203ENST00000473643 SMC3Q9UQE7 1217 aa10.51□□□□□ -0.73
SMG5-203ENST00000473643 PLXNB2O15031 1838 aa10.5□□□□□ -0.73
SMG5-203ENST00000473643 PNMA6FA0A0J9YX94 578 aa10.5□□□□□ -0.73
SMG5-203ENST00000473643 ATP2A1O14983 1001 aa10.5□□□□□ -0.73
SMG5-203ENST00000473643 ZBTB5O15062 677 aa10.5□□□□□ -0.73
SMG5-203ENST00000473643 FARP2O94887 1054 aaPredicted RBP10.5□□□□□ -0.73
SMG5-203ENST00000473643 PDIA4P13667 645 aaKnown RBP10.5□□□□□ -0.73
SMG5-203ENST00000473643 GJB2P29033 226 aa10.5□□□□□ -0.73
SMG5-203ENST00000473643 ADORA2AP29274 412 aa10.5□□□□□ -0.73
SMG5-203ENST00000473643 SLC4A3P48751 1232 aa10.5□□□□□ -0.73
SMG5-203ENST00000473643 MNX1P50219 401 aaPredicted RBP10.5□□□□□ -0.73
SMG5-203ENST00000473643 AKAP17AQ02040 695 aaKnown RBP10.5□□□□□ -0.73
SMG5-203ENST00000473643 PLS1Q14651 629 aa10.5□□□□□ -0.73
SMG5-203ENST00000473643 PFKFB3Q16875 520 aaPredicted RBP10.5□□□□□ -0.73
SMG5-203ENST00000473643 MFSD14CQ5VZR4 134 aa10.5□□□□□ -0.73
SMG5-203ENST00000473643 LHX8Q68G74 356 aa10.5□□□□□ -0.73
SMG5-203ENST00000473643 DPP9Q86TI2 863 aa10.5□□□□□ -0.73
SMG5-203ENST00000473643 NCAPG2Q86XI2 1143 aa10.5□□□□□ -0.73
SMG5-203ENST00000473643 ANKLE1Q8NAG6 615 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms