RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 TMEM39AQ9NV64 488 aa15.21■□□□□ 0.03
SHROOM3-204ENST00000473602 PGK2P07205 417 aa15.2■□□□□ 0.02
SHROOM3-204ENST00000473602 SNHG28P0DPA3 235 aa15.2■□□□□ 0.02
SHROOM3-204ENST00000473602 PDHBP11177 359 aa15.2■□□□□ 0.02
SHROOM3-204ENST00000473602 TAL1P17542 331 aaPredicted RBP15.2■□□□□ 0.02
SHROOM3-204ENST00000473602 PTH1RQ03431 593 aa15.2■□□□□ 0.02
SHROOM3-204ENST00000473602 FPGSQ05932 587 aa15.2■□□□□ 0.02
SHROOM3-204ENST00000473602 TRDNQ13061 729 aa15.2■□□□□ 0.02
SHROOM3-204ENST00000473602 BTNL9Q6UXG8 535 aa15.2■□□□□ 0.02
SHROOM3-204ENST00000473602 MAP4K1Q92918 833 aa15.2■□□□□ 0.02
SHROOM3-204ENST00000473602 ZSCAN10Q96SZ4 725 aaPredicted RBP15.2■□□□□ 0.02
SHROOM3-204ENST00000473602 RAVER2Q9HCJ3 691 aaKnown RBP15.2■□□□□ 0.02
SHROOM3-204ENST00000473602 NRBP1Q9UHY1 535 aa15.2■□□□□ 0.02
SHROOM3-204ENST00000473602 PRR12Q9ULL5 1215 aa15.2■□□□□ 0.02
SHROOM3-204ENST00000473602 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.19■□□□□ 0.02
SHROOM3-204ENST00000473602 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.19■□□□□ 0.02
SHROOM3-204ENST00000473602 A0A1W2PQ45 241 aaPredicted RBP15.19■□□□□ 0.02
SHROOM3-204ENST00000473602 A0A1W2PQY0 241 aa15.19■□□□□ 0.02
SHROOM3-204ENST00000473602 CYP21A2P08686 494 aa15.19■□□□□ 0.02
SHROOM3-204ENST00000473602 DNAJB2P25686 324 aa15.19■□□□□ 0.02
SHROOM3-204ENST00000473602 TKFCQ3LXA3 575 aa15.19■□□□□ 0.02
SHROOM3-204ENST00000473602 TJAP1Q5JTD0 557 aa15.19■□□□□ 0.02
SHROOM3-204ENST00000473602 GPATCH4Q5T3I0 446 aaKnown RBP15.19■□□□□ 0.02
SHROOM3-204ENST00000473602 KIAA1211Q6ZU35 1233 aa15.19■□□□□ 0.02
SHROOM3-204ENST00000473602 ZKSCAN3Q9BRR0 538 aa15.19■□□□□ 0.02
SHROOM3-204ENST00000473602 TINF2Q9BSI4 451 aa15.19■□□□□ 0.02
SHROOM3-204ENST00000473602 UBAC1Q9BSL1 405 aa15.19■□□□□ 0.02
SHROOM3-204ENST00000473602 ZSWIM5Q9P217 1185 aa15.19■□□□□ 0.02
SHROOM3-204ENST00000473602 PNMA2Q9UL42 364 aa15.19■□□□□ 0.02
SHROOM3-204ENST00000473602 MTMR7Q9Y216 660 aa15.19■□□□□ 0.02
SHROOM3-204ENST00000473602 RIPK3Q9Y572 518 aa15.19■□□□□ 0.02
SHROOM3-204ENST00000473602 ZNF536O15090 1300 aa15.18■□□□□ 0.02
SHROOM3-204ENST00000473602 TNKSO95271 1327 aa15.18■□□□□ 0.02
SHROOM3-204ENST00000473602 ZNF865P0CJ78 1059 aaPredicted RBP15.18■□□□□ 0.02
SHROOM3-204ENST00000473602 ZNF543Q08ER8 600 aa15.18■□□□□ 0.02
SHROOM3-204ENST00000473602 FAAP100Q0VG06 881 aa15.18■□□□□ 0.02
SHROOM3-204ENST00000473602 ZNF792Q3KQV3 632 aa15.18■□□□□ 0.02
SHROOM3-204ENST00000473602 RASGRP2Q7LDG7 609 aa15.18■□□□□ 0.02
SHROOM3-204ENST00000473602 MSL3Q8N5Y2 521 aaKnown RBP15.18■□□□□ 0.02
SHROOM3-204ENST00000473602 ENAHQ8N8S7 591 aaPredicted RBP15.18■□□□□ 0.02
SHROOM3-204ENST00000473602 PNMA1Q8ND90 353 aa15.18■□□□□ 0.02
SHROOM3-204ENST00000473602 LENG1Q96BZ8 264 aaPredicted RBP15.18■□□□□ 0.02
SHROOM3-204ENST00000473602 TIFAQ96CG3 184 aa15.18■□□□□ 0.02
SHROOM3-204ENST00000473602 DDX11Q96FC9 970 aa15.18■□□□□ 0.02
SHROOM3-204ENST00000473602 ESYT1Q9BSJ8 1104 aa15.18■□□□□ 0.02
SHROOM3-204ENST00000473602 ZNF576Q9H609 170 aa15.18■□□□□ 0.02
SHROOM3-204ENST00000473602 KAT14Q9H8E8 782 aa15.18■□□□□ 0.02
SHROOM3-204ENST00000473602 DNAJC25-GNG10A0A024R161 153 aa15.17■□□□□ 0.02
SHROOM3-204ENST00000473602 DCDC2CA8MYV0 355 aa15.17■□□□□ 0.02
SHROOM3-204ENST00000473602 AKR1A1P14550 325 aa15.17■□□□□ 0.02
SHROOM3-204ENST00000473602 SYDE2Q5VT97 1194 aa15.17■□□□□ 0.02
SHROOM3-204ENST00000473602 CASC1Q6TDU7 716 aa15.17■□□□□ 0.02
SHROOM3-204ENST00000473602 ANKRD33Q7Z3H0 272 aa15.17■□□□□ 0.02
SHROOM3-204ENST00000473602 ZNF467Q7Z7K2 595 aaPredicted RBP15.17■□□□□ 0.02
SHROOM3-204ENST00000473602 RALYLQ86SE5 291 aaKnown RBP15.17■□□□□ 0.02
SHROOM3-204ENST00000473602 NCOA7Q8NI08 942 aa15.17■□□□□ 0.02
SHROOM3-204ENST00000473602 TOX2Q96NM4 488 aa15.17■□□□□ 0.02
SHROOM3-204ENST00000473602 RANBP17Q9H2T7 1088 aaKnown RBP15.17■□□□□ 0.02
SHROOM3-204ENST00000473602 ACAD9Q9H845 621 aa15.17■□□□□ 0.02
SHROOM3-204ENST00000473602 FRMPD2Q68DX3 1309 aaPredicted RBP15.17■□□□□ 0.02
SHROOM3-204ENST00000473602 MYH6P13533 1939 aa15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 TNFRSF10AO00220 468 aa15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 ADAMTS4O75173 837 aa15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 ICAM1P05362 532 aa15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 CENPBP07199 599 aaPredicted RBP15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 COL9A1P20849 921 aa15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 SLC4A3P48751 1232 aa15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 ACLYP53396 1101 aa15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 ASPRV1Q53RT3 343 aa15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 IFIT1BQ5T764 474 aaKnown RBP15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 ERICH6BQ5W0A0 696 aa15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 ANKRD35Q8N283 1001 aa15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 PPM1EQ8WY54 764 aa15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 CHMP4CQ96CF2 233 aa15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 TSEN34Q9BSV6 310 aaKnown RBP15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 GPCPD1Q9NPB8 672 aa15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 STARD7Q9NQZ5 370 aa15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 RNF146Q9NTX7 359 aa15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 RBM8AQ9Y5S9 174 aaKnown RBP15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 SMCHD1A6NHR9 2005 aa15.16■□□□□ 0.02
SHROOM3-204ENST00000473602 E7EWF7 191 aa15.15■□□□□ 0.02
SHROOM3-204ENST00000473602 TIMP1P01033 207 aa15.15■□□□□ 0.02
SHROOM3-204ENST00000473602 SLC16A2P36021 539 aa15.15■□□□□ 0.02
SHROOM3-204ENST00000473602 SART3Q15020 963 aaKnown RBP15.15■□□□□ 0.02
SHROOM3-204ENST00000473602 SEC23AQ15436 765 aa15.15■□□□□ 0.02
SHROOM3-204ENST00000473602 KCNA10Q16322 511 aa15.15■□□□□ 0.02
SHROOM3-204ENST00000473602 TTBK2Q6IQ55 1244 aa15.15■□□□□ 0.02
SHROOM3-204ENST00000473602 MAMDC4Q6UXC1 1216 aa15.15■□□□□ 0.02
SHROOM3-204ENST00000473602 NUP133Q8WUM0 1156 aa15.15■□□□□ 0.02
SHROOM3-204ENST00000473602 AGBL1Q96MI9 1066 aa15.15■□□□□ 0.02
SHROOM3-204ENST00000473602 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.15■□□□□ 0.02
SHROOM3-204ENST00000473602 LSG1Q9H089 658 aaKnown RBP15.15■□□□□ 0.02
SHROOM3-204ENST00000473602 HOMER2Q9NSB8 354 aa15.15■□□□□ 0.02
SHROOM3-204ENST00000473602 CCPG1Q9ULG6 757 aa15.15■□□□□ 0.02
SHROOM3-204ENST00000473602 CNPY2Q9Y2B0 182 aa15.15■□□□□ 0.02
SHROOM3-204ENST00000473602 WDR19Q8NEZ3 1342 aa15.15■□□□□ 0.02
SHROOM3-204ENST00000473602 SYNGAP1Q96PV0 1343 aa15.15■□□□□ 0.02
SHROOM3-204ENST00000473602 MCM3APO60318 1980 aa15.15■□□□□ 0.02
SHROOM3-204ENST00000473602 ERICH2A1L162 156 aa15.14■□□□□ 0.01
SHROOM3-204ENST00000473602 GRXCR1A8MXD5 290 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms