RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 SBK1Q52WX2 424 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 SPTY2D1Q68D10 685 aaPredicted RBP6.81□□□□□ -1.32
HERC4-209ENST00000473533 DGKHQ86XP1 1220 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 C3orf20Q8ND61 904 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 MMS19Q96T76 1030 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 IFIH1Q9BYX4 1025 aaKnown RBP6.81□□□□□ -1.32
HERC4-209ENST00000473533 KBTBD4Q9NVX7 518 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 GGA2Q9UJY4 613 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 hCG_1984214I3L0E3 225 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 EIF3HO15372 352 aaKnown RBP eCLIP6.81□□□□□ -1.32
HERC4-209ENST00000473533 PRKAB2O43741 272 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 N4BP1O75113 896 aaKnown RBP6.81□□□□□ -1.32
HERC4-209ENST00000473533 CYP19A1P11511 503 aaPredicted RBP6.81□□□□□ -1.32
HERC4-209ENST00000473533 ZSCAN29Q8IWY8 852 aaPredicted RBP6.81□□□□□ -1.32
HERC4-209ENST00000473533 ZNF713Q8N859 430 aaPredicted RBP6.81□□□□□ -1.32
HERC4-209ENST00000473533 NOX5Q96PH1 765 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 C7orf25Q9BPX7 421 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 SEC31BQ9NQW1 1179 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 STK17AQ9UEE5 414 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 ZNF804BA4D1E1 1349 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 SSU72P8A0A1W2PR75 194 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 RGL2O15211 777 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 AKR1B10O60218 316 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 GNA11P29992 359 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 GGCXP38435 758 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 LRRC63Q05C16 580 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 PSMD2Q13200 908 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 DRP2Q13474 957 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 SEPT2Q15019 361 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 TTI2Q6NXR4 508 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 C8orf74Q6P047 294 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 ANKRD18AQ8IVF6 992 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 CABLES1Q8TDN4 633 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 CNOT6LQ96LI5 555 aaKnown RBP6.8□□□□□ -1.32
HERC4-209ENST00000473533 CHP1Q99653 195 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 STIM2Q9P246 746 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 REXO2Q9Y3B8 237 aaKnown RBP6.8□□□□□ -1.32
HERC4-209ENST00000473533 LAMB2P55268 1798 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 SHANK3Q9BYB0 1731 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 NUP98P52948 1817 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 PVALEFA0A1B0GWK0 134 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 TULP1O00294 542 aaPredicted RBP6.8□□□□□ -1.32
HERC4-209ENST00000473533 TRIM66O15016 1216 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 PJA2O43164 708 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 SLC26A4O43511 780 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 PLEKHA8P1O95397 391 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 LCA5LO95447 670 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 GUCY2CP25092 1073 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 INPP5BP32019 993 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 MAN2A1Q16706 1144 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 SWT1Q5T5J6 900 aaKnown RBP6.8□□□□□ -1.32
HERC4-209ENST00000473533 SND1Q7KZF4 910 aaKnown RBP eCLIP6.8□□□□□ -1.32
HERC4-209ENST00000473533 MIGA1Q8NAN2 632 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 WHAMMQ8TF30 809 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 SYN2Q92777 582 aaPredicted RBP6.8□□□□□ -1.32
HERC4-209ENST00000473533 CAPZA3Q96KX2 299 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 SH3GL2Q99962 352 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 TTYH3Q9C0H2 523 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 SH2D4AQ9H788 454 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 RIC8AQ9NPQ8 531 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 ABCF2Q9UG63 623 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 PLAGL2Q9UPG8 496 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 TSPY2A6NKD2 308 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 GNA14O95837 355 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 IRAK1P51617 712 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 TNNC1P63316 161 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 PDE4DQ08499 809 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 HLFQ16534 295 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 TMEM266Q2M3C6 531 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 VWA3BQ502W6 1294 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 C10orf76Q5T2E6 689 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 CFAP58Q5T655 872 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 MCTP2Q6DN12 878 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 ARMC9Q7Z3E5 817 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 CABP7Q86V35 215 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 PROM2Q8N271 834 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 MICALL1Q8N3F8 863 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 ANKS1AQ92625 1134 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 GEMIN8Q9NWZ8 242 aaKnown RBP6.8□□□□□ -1.32
HERC4-209ENST00000473533 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.8□□□□□ -1.32
HERC4-209ENST00000473533 GDAQ9Y2T3 454 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 PCDHA13Q9Y5I0 950 aa6.8□□□□□ -1.32
HERC4-209ENST00000473533 B4DLN1 442 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 UBE2Q2LH0YL09 131 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 CES2O00748 559 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 PRDM1O75626 825 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 PLCB4Q15147 1175 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 WDR59Q6PJI9 974 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 YTHDF3Q7Z739 585 aaKnown RBP6.79□□□□□ -1.32
HERC4-209ENST00000473533 CMTR1Q8N1G2 835 aaKnown RBP6.79□□□□□ -1.32
HERC4-209ENST00000473533 MREGQ8N565 214 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 BCAS4Q8TDM0 211 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 PIGBQ92521 554 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 RIOK1Q9BRS2 568 aaKnown RBP6.79□□□□□ -1.32
HERC4-209ENST00000473533 SUGCTQ9HAC7 445 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 C6orf50Q9HD87 102 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 INCENPQ9NQS7 918 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 LCMT1Q9UIC8 334 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 CASZ1Q86V15 1759 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 GOLGA6L7A0A1B0GV03 622 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms