RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 UBA5Q9GZZ9 404 aa13.46□□□□□ -0.25
CPNE1-222ENST00000473373 SPC25Q9HBM1 224 aa13.46□□□□□ -0.25
CPNE1-222ENST00000473373 A1CFQ9NQ94 594 aaKnown RBP13.46□□□□□ -0.25
CPNE1-222ENST00000473373 NRBP1Q9UHY1 535 aa13.46□□□□□ -0.25
CPNE1-222ENST00000473373 FAM184BQ9ULE4 1060 aa13.46□□□□□ -0.25
CPNE1-222ENST00000473373 LCTP09848 1927 aa13.46□□□□□ -0.25
CPNE1-222ENST00000473373 ZNF536O15090 1300 aa13.45□□□□□ -0.26
CPNE1-222ENST00000473373 ASB14A6NK59 587 aa13.45□□□□□ -0.26
CPNE1-222ENST00000473373 TAL1P17542 331 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-222ENST00000473373 CALML3P27482 149 aa13.45□□□□□ -0.26
CPNE1-222ENST00000473373 BMP8BP34820 402 aa13.45□□□□□ -0.26
CPNE1-222ENST00000473373 MNX1P50219 401 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-222ENST00000473373 CNTN2Q02246 1040 aa13.45□□□□□ -0.26
CPNE1-222ENST00000473373 MUM1L1Q5H9M0 696 aa13.45□□□□□ -0.26
CPNE1-222ENST00000473373 TMEM67Q5HYA8 995 aa13.45□□□□□ -0.26
CPNE1-222ENST00000473373 RNF20Q5VTR2 975 aa13.45□□□□□ -0.26
CPNE1-222ENST00000473373 BTNL9Q6UXG8 535 aa13.45□□□□□ -0.26
CPNE1-222ENST00000473373 NFXL1Q6ZNB6 911 aa13.45□□□□□ -0.26
CPNE1-222ENST00000473373 CYB5R4Q7L1T6 521 aa13.45□□□□□ -0.26
CPNE1-222ENST00000473373 ARMCX2Q7L311 632 aa13.45□□□□□ -0.26
CPNE1-222ENST00000473373 CHST3Q7LGC8 479 aa13.45□□□□□ -0.26
CPNE1-222ENST00000473373 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-222ENST00000473373 ADD3Q9UEY8 706 aaKnown RBP13.45□□□□□ -0.26
CPNE1-222ENST00000473373 PRKAG2Q9UGJ0 569 aa13.45□□□□□ -0.26
CPNE1-222ENST00000473373 DNAJC25-GNG10A0A024R161 153 aa13.44□□□□□ -0.26
CPNE1-222ENST00000473373 CDC45O75419 566 aa13.44□□□□□ -0.26
CPNE1-222ENST00000473373 MAGEA10P43363 369 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-222ENST00000473373 ACVR2BQ13705 512 aa13.44□□□□□ -0.26
CPNE1-222ENST00000473373 CDC37Q16543 378 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-222ENST00000473373 RNF207Q6ZRF8 634 aa13.44□□□□□ -0.26
CPNE1-222ENST00000473373 CATIPQ7Z7H3 387 aa13.44□□□□□ -0.26
CPNE1-222ENST00000473373 ZNF467Q7Z7K2 595 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-222ENST00000473373 CCDC144CPQ8IYA2 1237 aa13.44□□□□□ -0.26
CPNE1-222ENST00000473373 NUP133Q8WUM0 1156 aa13.44□□□□□ -0.26
CPNE1-222ENST00000473373 MAP4K1Q92918 833 aa13.44□□□□□ -0.26
CPNE1-222ENST00000473373 VTI1AQ96AJ9 217 aa13.44□□□□□ -0.26
CPNE1-222ENST00000473373 CPVLQ9H3G5 476 aa13.44□□□□□ -0.26
CPNE1-222ENST00000473373 ABHD16BQ9H3Z7 469 aa13.44□□□□□ -0.26
CPNE1-222ENST00000473373 LRRC37A2A6NM11 1700 aa13.43□□□□□ -0.26
CPNE1-222ENST00000473373 PGK1P00558 417 aa13.43□□□□□ -0.26
CPNE1-222ENST00000473373 EEPD1Q7L9B9 569 aa13.43□□□□□ -0.26
CPNE1-222ENST00000473373 ADGRF4Q8IZF3 695 aa13.43□□□□□ -0.26
CPNE1-222ENST00000473373 FERMT2Q96AC1 680 aa13.43□□□□□ -0.26
CPNE1-222ENST00000473373 CYP39A1Q9NYL5 469 aa13.43□□□□□ -0.26
CPNE1-222ENST00000473373 ATP11BQ9Y2G3 1177 aa13.43□□□□□ -0.26
CPNE1-222ENST00000473373 MYH7BA7E2Y1 1941 aa13.43□□□□□ -0.26
CPNE1-222ENST00000473373 CCDC69A6NI79 296 aa13.42□□□□□ -0.26
CPNE1-222ENST00000473373 B4DLN1 442 aa13.42□□□□□ -0.26
CPNE1-222ENST00000473373 NFIBO00712 420 aa13.42□□□□□ -0.26
CPNE1-222ENST00000473373 C6orf222P0C671 652 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-222ENST00000473373 SNHG28P0DPA3 235 aa13.42□□□□□ -0.26
CPNE1-222ENST00000473373 ADCYAP1R1P41586 468 aa13.42□□□□□ -0.26
CPNE1-222ENST00000473373 MRPL12P52815 198 aaKnown RBP13.42□□□□□ -0.26
CPNE1-222ENST00000473373 BAATQ14032 418 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-222ENST00000473373 LRRC41Q15345 812 aa13.42□□□□□ -0.26
CPNE1-222ENST00000473373 CCDC144BQ3MJ40 725 aa13.42□□□□□ -0.26
CPNE1-222ENST00000473373 MAMDC4Q6UXC1 1216 aa13.42□□□□□ -0.26
CPNE1-222ENST00000473373 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.42□□□□□ -0.26
CPNE1-222ENST00000473373 FBXO11Q86XK2 927 aa13.42□□□□□ -0.26
CPNE1-222ENST00000473373 HOMER1Q86YM7 354 aa13.42□□□□□ -0.26
CPNE1-222ENST00000473373 ANKS1AQ92625 1134 aa13.42□□□□□ -0.26
CPNE1-222ENST00000473373 LENG1Q96BZ8 264 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-222ENST00000473373 UBE2OQ9C0C9 1292 aaKnown RBP13.42□□□□□ -0.26
CPNE1-222ENST00000473373 KIAA1217Q5T5P2 1943 aa13.42□□□□□ -0.26
CPNE1-222ENST00000473373 ABCB11O95342 1321 aa13.41□□□□□ -0.26
CPNE1-222ENST00000473373 WDR19Q8NEZ3 1342 aa13.41□□□□□ -0.26
CPNE1-222ENST00000473373 COL6A3P12111 3177 aa13.41□□□□□ -0.26
CPNE1-222ENST00000473373 KLRF2D3W0D1 207 aa13.41□□□□□ -0.26
CPNE1-222ENST00000473373 SLC27A2O14975 620 aa13.41□□□□□ -0.26
CPNE1-222ENST00000473373 SNAI1O95863 264 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-222ENST00000473373 ZNF865P0CJ78 1059 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-222ENST00000473373 MCM5P33992 734 aa13.41□□□□□ -0.26
CPNE1-222ENST00000473373 PDE4DQ08499 809 aa13.41□□□□□ -0.26
CPNE1-222ENST00000473373 LRRC26Q2I0M4 334 aa13.41□□□□□ -0.26
CPNE1-222ENST00000473373 LRIT3Q3SXY7 679 aa13.41□□□□□ -0.26
CPNE1-222ENST00000473373 CREB3L3Q68CJ9 461 aa13.41□□□□□ -0.26
CPNE1-222ENST00000473373 TDHQ8IZJ6 230 aa13.41□□□□□ -0.26
CPNE1-222ENST00000473373 FAM133AQ8N9E0 248 aa13.41□□□□□ -0.26
CPNE1-222ENST00000473373 CTCFLQ8NI51 663 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-222ENST00000473373 PIBF1Q8WXW3 757 aa13.41□□□□□ -0.26
CPNE1-222ENST00000473373 LBHD1Q9BQE6 289 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-222ENST00000473373 LSG1Q9H089 658 aaKnown RBP13.41□□□□□ -0.26
CPNE1-222ENST00000473373 AP5M1Q9H0R1 490 aa13.41□□□□□ -0.26
CPNE1-222ENST00000473373 PRDM5Q9NQX1 630 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-222ENST00000473373 MRPL11Q9Y3B7 192 aaKnown RBP13.41□□□□□ -0.26
CPNE1-222ENST00000473373 SYNRGQ9UMZ2 1314 aa13.4□□□□□ -0.26
CPNE1-222ENST00000473373 SOWAHBA6NEL2 793 aa13.4□□□□□ -0.26
CPNE1-222ENST00000473373 PRC1O43663 620 aa13.4□□□□□ -0.26
CPNE1-222ENST00000473373 ALDH5A1P51649 535 aaPredicted RBP13.4□□□□□ -0.26
CPNE1-222ENST00000473373 RTP1P59025 263 aa13.4□□□□□ -0.26
CPNE1-222ENST00000473373 FGD1P98174 961 aa13.4□□□□□ -0.26
CPNE1-222ENST00000473373 TNFAIP2Q03169 654 aa13.4□□□□□ -0.26
CPNE1-222ENST00000473373 SEC23AQ15436 765 aa13.4□□□□□ -0.26
CPNE1-222ENST00000473373 QRICH1Q2TAL8 776 aa13.4□□□□□ -0.26
CPNE1-222ENST00000473373 GPR153Q6NV75 609 aa13.4□□□□□ -0.26
CPNE1-222ENST00000473373 SLC30A10Q6XR72 485 aa13.4□□□□□ -0.26
CPNE1-222ENST00000473373 SYNE3Q6ZMZ3 975 aa13.4□□□□□ -0.26
CPNE1-222ENST00000473373 STOX1Q6ZVD7 989 aa13.4□□□□□ -0.26
CPNE1-222ENST00000473373 MCF2L2Q86YR7 1114 aa13.4□□□□□ -0.26
CPNE1-222ENST00000473373 FBXO16Q8IX29 292 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms