RNA–Protein interactions for RNA: ENST00000473349.1

BRD3-205, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-205ENST00000473349 C1orf53Q5VUE5 145 aa11.23□□□□□ -0.61
BRD3-205ENST00000473349 ZNF589Q86UQ0 364 aaPredicted RBP11.23□□□□□ -0.61
BRD3-205ENST00000473349 YTHDC1Q96MU7 727 aaKnown RBP11.23□□□□□ -0.61
BRD3-205ENST00000473349 TTYH1Q9H313 450 aaPredicted RBP11.23□□□□□ -0.61
BRD3-205ENST00000473349 A1CFQ9NQ94 594 aaKnown RBP11.23□□□□□ -0.61
BRD3-205ENST00000473349 TMEM39AQ9NV64 488 aa11.23□□□□□ -0.61
BRD3-205ENST00000473349 KIAA0355O15063 1070 aa11.22□□□□□ -0.61
BRD3-205ENST00000473349 DUSP11O75319 330 aaKnown RBP11.22□□□□□ -0.61
BRD3-205ENST00000473349 ASGR1P07306 291 aa11.22□□□□□ -0.61
BRD3-205ENST00000473349 SLC3A2P08195 630 aaKnown RBP11.22□□□□□ -0.61
BRD3-205ENST00000473349 RAG1P15918 1043 aa11.22□□□□□ -0.61
BRD3-205ENST00000473349 CCDC96Q2M329 555 aa11.22□□□□□ -0.61
BRD3-205ENST00000473349 FRMPD2Q68DX3 1309 aaPredicted RBP11.22□□□□□ -0.61
BRD3-205ENST00000473349 FAM109BQ6ICB4 259 aaPredicted RBP11.22□□□□□ -0.61
BRD3-205ENST00000473349 EEPD1Q7L9B9 569 aa11.22□□□□□ -0.61
BRD3-205ENST00000473349 FAM133AQ8N9E0 248 aa11.22□□□□□ -0.61
BRD3-205ENST00000473349 CHST13Q8NET6 341 aa11.22□□□□□ -0.61
BRD3-205ENST00000473349 STAG1Q8WVM7 1258 aa11.22□□□□□ -0.61
BRD3-205ENST00000473349 GMCL1Q96IK5 515 aa11.22□□□□□ -0.61
BRD3-205ENST00000473349 TRERF1Q96PN7 1200 aa11.22□□□□□ -0.61
BRD3-205ENST00000473349 LNPKQ9C0E8 428 aa11.22□□□□□ -0.61
BRD3-205ENST00000473349 STARD7Q9NQZ5 370 aa11.22□□□□□ -0.61
BRD3-205ENST00000473349 PDGFCQ9NRA1 345 aa11.22□□□□□ -0.61
BRD3-205ENST00000473349 TOMM22Q9NS69 142 aa11.22□□□□□ -0.61
BRD3-205ENST00000473349 PRR12Q9ULL5 1215 aa11.22□□□□□ -0.61
BRD3-205ENST00000473349 SYNPO2Q9UMS6 1093 aa11.22□□□□□ -0.61
BRD3-205ENST00000473349 OAZ1P54368 228 aa11.21□□□□□ -0.61
BRD3-205ENST00000473349 NMIQ13287 307 aaPredicted RBP11.21□□□□□ -0.61
BRD3-205ENST00000473349 GNASQ5JWF2 1037 aa11.21□□□□□ -0.61
BRD3-205ENST00000473349 ZNF697Q5TEC3 545 aa11.21□□□□□ -0.61
BRD3-205ENST00000473349 B4GALNT3Q6L9W6 998 aa11.21□□□□□ -0.61
BRD3-205ENST00000473349 NOL8Q76FK4 1167 aaKnown RBP11.21□□□□□ -0.61
BRD3-205ENST00000473349 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.21□□□□□ -0.61
BRD3-205ENST00000473349 ZNF467Q7Z7K2 595 aaPredicted RBP11.21□□□□□ -0.61
BRD3-205ENST00000473349 FBXO16Q8IX29 292 aaPredicted RBP11.21□□□□□ -0.61
BRD3-205ENST00000473349 MSL3Q8N5Y2 521 aaKnown RBP11.21□□□□□ -0.61
BRD3-205ENST00000473349 PPP1R13LQ8WUF5 828 aa11.21□□□□□ -0.61
BRD3-205ENST00000473349 MYLIPQ8WY64 445 aa11.21□□□□□ -0.61
BRD3-205ENST00000473349 VTI1AQ96AJ9 217 aa11.21□□□□□ -0.61
BRD3-205ENST00000473349 RNPC3Q96LT9 517 aaKnown RBP11.21□□□□□ -0.61
BRD3-205ENST00000473349 CDX2Q99626 313 aaPredicted RBP11.21□□□□□ -0.61
BRD3-205ENST00000473349 SEMA6BQ9H3T3 888 aa11.21□□□□□ -0.61
BRD3-205ENST00000473349 ACAD9Q9H845 621 aa11.21□□□□□ -0.61
BRD3-205ENST00000473349 GPCPD1Q9NPB8 672 aa11.21□□□□□ -0.61
BRD3-205ENST00000473349 FBXO40Q9UH90 709 aa11.21□□□□□ -0.61
BRD3-205ENST00000473349 LCTP09848 1927 aa11.2□□□□□ -0.62
BRD3-205ENST00000473349 FGAP02671 866 aa11.2□□□□□ -0.62
BRD3-205ENST00000473349 RCSD1Q6JBY9 416 aa11.2□□□□□ -0.62
BRD3-205ENST00000473349 CXCL17Q6UXB2 119 aa11.2□□□□□ -0.62
BRD3-205ENST00000473349 NSMFQ6X4W1 530 aa11.2□□□□□ -0.62
BRD3-205ENST00000473349 C16orf59Q7L2K0 433 aa11.2□□□□□ -0.62
BRD3-205ENST00000473349 ANKRD33Q7Z3H0 272 aa11.2□□□□□ -0.62
BRD3-205ENST00000473349 FAM160B2Q86V87 743 aa11.2□□□□□ -0.62
BRD3-205ENST00000473349 TBC1D10CQ8IV04 446 aa11.2□□□□□ -0.62
BRD3-205ENST00000473349 CHURC1Q8WUH1 139 aa11.2□□□□□ -0.62
BRD3-205ENST00000473349 EVI5LQ96CN4 794 aa11.2□□□□□ -0.62
BRD3-205ENST00000473349 TSEN34Q9BSV6 310 aaKnown RBP11.2□□□□□ -0.62
BRD3-205ENST00000473349 PPP1R12CQ9BZL4 782 aa11.2□□□□□ -0.62
BRD3-205ENST00000473349 UPF3AQ9H1J1 476 aaKnown RBP11.2□□□□□ -0.62
BRD3-205ENST00000473349 ABHD16BQ9H3Z7 469 aa11.2□□□□□ -0.62
BRD3-205ENST00000473349 ANAPC4Q9UJX5 808 aa11.2□□□□□ -0.62
BRD3-205ENST00000473349 TBX21Q9UL17 535 aa11.2□□□□□ -0.62
BRD3-205ENST00000473349 CCPG1Q9ULG6 757 aa11.2□□□□□ -0.62
BRD3-205ENST00000473349 LRRC37A2A6NM11 1700 aa11.2□□□□□ -0.62
BRD3-205ENST00000473349 UMODL1Q5DID0 1318 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 MOXD2PA6NHM9 499 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 GRXCR1A8MXD5 290 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 DCDC2CA8MYV0 355 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 NFIBO00712 420 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 ORC4O43929 436 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 ACRP10323 421 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 HSPD1P10809 573 aaKnown RBP11.19□□□□□ -0.62
BRD3-205ENST00000473349 SMPD1P17405 629 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 CST5P28325 142 aaPredicted RBP11.19□□□□□ -0.62
BRD3-205ENST00000473349 CDK7P50613 346 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 GJA9P57773 515 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 PSMC6P62333 389 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 TNFAIP2Q03169 654 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 FPGSQ05932 587 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 PPP4R3BQ5MIZ7 849 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 NUP133Q8WUM0 1156 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 RILPL2Q969X0 211 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 GLT1D1Q96MS3 346 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 TMEM47Q9BQJ4 181 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.19□□□□□ -0.627e-10■■■□□ 15.4
BRD3-205ENST00000473349 CPVLQ9H3G5 476 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 CYP39A1Q9NYL5 469 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 CHD9Q3L8U1 2897 aa11.19□□□□□ -0.62
BRD3-205ENST00000473349 SPTBN5Q9NRC6 3674 aaKnown RBP11.19□□□□□ -0.62
BRD3-205ENST00000473349 GRIN2DO15399 1336 aa11.18□□□□□ -0.62
BRD3-205ENST00000473349 TRIM6-TRIM34B2RNG4 842 aa11.18□□□□□ -0.62
BRD3-205ENST00000473349 DYNC1LI2O43237 492 aaPredicted RBP11.18□□□□□ -0.62
BRD3-205ENST00000473349 TIMP1P01033 207 aa11.18□□□□□ -0.62
BRD3-205ENST00000473349 IGHDP01880 384 aa11.18□□□□□ -0.62
BRD3-205ENST00000473349 FDX1P10109 184 aa11.18□□□□□ -0.62
BRD3-205ENST00000473349 CSF2RAP15509 400 aa11.18□□□□□ -0.62
BRD3-205ENST00000473349 CYP2C18P33260 490 aa11.18□□□□□ -0.62
BRD3-205ENST00000473349 PBX2P40425 430 aa11.18□□□□□ -0.62
BRD3-205ENST00000473349 NOVP48745 357 aa11.18□□□□□ -0.62
BRD3-205ENST00000473349 HDAC1Q13547 482 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms