RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 ZBED9Q6R2W3 1325 aa8.27□□□□□ -1.09
CKS1B-205ENST00000473344 MINDY4BA8MYZ0 360 aa8.26□□□□□ -1.09
CKS1B-205ENST00000473344 SMIM22K7EJ46 135 aa8.26□□□□□ -1.09
CKS1B-205ENST00000473344 TLR3O15455 904 aaKnown RBP8.26□□□□□ -1.09
CKS1B-205ENST00000473344 ASGR1P07306 291 aa8.26□□□□□ -1.09
CKS1B-205ENST00000473344 ACVR2BQ13705 512 aa8.26□□□□□ -1.09
CKS1B-205ENST00000473344 GNASQ5JWF2 1037 aa8.26□□□□□ -1.09
CKS1B-205ENST00000473344 MAMDC4Q6UXC1 1216 aa8.26□□□□□ -1.09
CKS1B-205ENST00000473344 ZNF444Q8N0Y2 327 aaPredicted RBP8.26□□□□□ -1.09
CKS1B-205ENST00000473344 KLHDC9Q8NEP7 349 aa8.26□□□□□ -1.09
CKS1B-205ENST00000473344 REPS2Q8NFH8 660 aa8.26□□□□□ -1.09
CKS1B-205ENST00000473344 PPM1EQ8WY54 764 aa8.26□□□□□ -1.09
CKS1B-205ENST00000473344 ZDHHC16Q969W1 377 aa8.26□□□□□ -1.09
CKS1B-205ENST00000473344 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.26□□□□□ -1.09
CKS1B-205ENST00000473344 PUS7LQ9H0K6 701 aaKnown RBP8.26□□□□□ -1.09
CKS1B-205ENST00000473344 MTIF3Q9H2K0 278 aaKnown RBP8.26□□□□□ -1.09
CKS1B-205ENST00000473344 ABHD16BQ9H3Z7 469 aa8.26□□□□□ -1.09
CKS1B-205ENST00000473344 CLIP2Q9UDT6 1046 aa8.26□□□□□ -1.09
CKS1B-205ENST00000473344 FBXO40Q9UH90 709 aa8.26□□□□□ -1.09
CKS1B-205ENST00000473344 ISY1Q9ULR0 285 aaKnown RBP8.26□□□□□ -1.09
CKS1B-205ENST00000473344 DDX19BQ9UMR2 479 aa8.26□□□□□ -1.09
CKS1B-205ENST00000473344 A0A0U1RQG5 324 aaPredicted RBP8.25□□□□□ -1.09
CKS1B-205ENST00000473344 ARVCFO00192 962 aa8.25□□□□□ -1.09
CKS1B-205ENST00000473344 TNFRSF10AO00220 468 aa8.25□□□□□ -1.09
CKS1B-205ENST00000473344 SNAI1O95863 264 aaPredicted RBP8.25□□□□□ -1.09
CKS1B-205ENST00000473344 NDUFB10O96000 172 aa8.25□□□□□ -1.09
CKS1B-205ENST00000473344 CHGBP05060 677 aa8.25□□□□□ -1.09
CKS1B-205ENST00000473344 APPP05067 770 aa8.25□□□□□ -1.09
CKS1B-205ENST00000473344 CSF2RAP15509 400 aa8.25□□□□□ -1.09
CKS1B-205ENST00000473344 PTPN5P54829 565 aa8.25□□□□□ -1.09
CKS1B-205ENST00000473344 CCDC144BQ3MJ40 725 aa8.25□□□□□ -1.09
CKS1B-205ENST00000473344 PSRC1Q6PGN9 363 aaPredicted RBP8.25□□□□□ -1.09
CKS1B-205ENST00000473344 THSD4Q6ZMP0 1018 aa8.25□□□□□ -1.09
CKS1B-205ENST00000473344 NOL8Q76FK4 1167 aaKnown RBP8.25□□□□□ -1.09
CKS1B-205ENST00000473344 IL27Q8NEV9 243 aa8.25□□□□□ -1.09
CKS1B-205ENST00000473344 ZBED2Q9BTP6 218 aa8.25□□□□□ -1.09
CKS1B-205ENST00000473344 PPP1R12CQ9BZL4 782 aa8.25□□□□□ -1.09
CKS1B-205ENST00000473344 LRRCC1Q9C099 1032 aa8.25□□□□□ -1.09
CKS1B-205ENST00000473344 RAVER2Q9HCJ3 691 aaKnown RBP8.25□□□□□ -1.09
CKS1B-205ENST00000473344 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.25□□□□□ -1.09
CKS1B-205ENST00000473344 NYAP2Q9P242 653 aa8.25□□□□□ -1.09
CKS1B-205ENST00000473344 TBX21Q9UL17 535 aa8.25□□□□□ -1.09
CKS1B-205ENST00000473344 RIPK3Q9Y572 518 aa8.25□□□□□ -1.09
CKS1B-205ENST00000473344 DNAJC25-GNG10A0A024R161 153 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 MYADML2A6NDP7 307 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 ATP2A1O14983 1001 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 RASA1P20936 1047 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 IGFBP4P22692 258 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 CST5P28325 142 aaPredicted RBP8.24□□□□□ -1.09
CKS1B-205ENST00000473344 TDO2P48775 406 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 CDK7P50613 346 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 OAZ1P54368 228 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 GJA9P57773 515 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 IKQ13123 557 aaPredicted RBP8.24□□□□□ -1.09
CKS1B-205ENST00000473344 SBK1Q52WX2 424 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 TMEM240Q5SV17 173 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 CCSAPQ6IQ19 270 aaPredicted RBP8.24□□□□□ -1.09
CKS1B-205ENST00000473344 GIMAP6Q6P9H5 292 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 ARMCX2Q7L311 632 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 SIRT2Q8IXJ6 389 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 CCDC144CPQ8IYA2 1237 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 USP38Q8NB14 1042 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 CHST13Q8NET6 341 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 ATXN2LQ8WWM7 1075 aaKnown RBP8.24□□□□□ -1.09
CKS1B-205ENST00000473344 GPATCH3Q96I76 525 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 STRBPQ96SI9 672 aaKnown RBP8.24□□□□□ -1.09
CKS1B-205ENST00000473344 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.24□□□□□ -1.09
CKS1B-205ENST00000473344 PBX4Q9BYU1 374 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 SLC28A3Q9HAS3 691 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 SLC38A10Q9HBR0 1119 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 HOMER2Q9NSB8 354 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 ZBTB40Q9NUA8 1239 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 MSRAQ9UJ68 235 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 FEM1BQ9UK73 627 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 COG6Q9Y2V7 657 aa8.24□□□□□ -1.09
CKS1B-205ENST00000473344 CHD9Q3L8U1 2897 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 GRXCR1A8MXD5 290 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 ZEB2O60315 1214 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 PRDM1O75626 825 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 TTLL1O95922 423 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 FGBP02675 491 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 TSPY3P0CV98 308 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 TSPY8P0CW00 308 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 FDX1P10109 184 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 ACRP10323 421 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 BMP3P12645 472 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 GNAT2P19087 354 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 STAT2P52630 851 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 TNFAIP2Q03169 654 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 RAB30Q15771 203 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 LRRFIP1Q32MZ4 808 aaKnown RBP8.23□□□□□ -1.09
CKS1B-205ENST00000473344 ZNF365Q70YC5 407 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 FAM126BQ8IXS8 530 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 LRRC47Q8N1G4 583 aaKnown RBP8.23□□□□□ -1.09
CKS1B-205ENST00000473344 WNT2BQ93097 391 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 DDX27Q96GQ7 796 aaKnown RBP8.23□□□□□ -1.09
CKS1B-205ENST00000473344 AP5M1Q9H0R1 490 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 PRDM12Q9H4Q4 367 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 ACAD9Q9H845 621 aa8.23□□□□□ -1.09
CKS1B-205ENST00000473344 ECHDC1Q9NTX5 307 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms