RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 A0A1B0GUL6 1792 aa11.37□□□□□ -0.59
APTX-216ENST00000472896 A0A087WWV3 80 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 RNF40O75150 1001 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 PRPF6O94906 941 aaKnown RBP11.36□□□□□ -0.59
APTX-216ENST00000472896 SCRN1Q12765 414 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 STK38Q15208 465 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 LMBR1LQ6UX01 489 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 GBP6Q6ZN66 633 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 Q6ZUG5 572 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 LINC00301Q8NCQ3 95 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 LINS1Q8NG48 757 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 PNKPQ96T60 521 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 POLR3EQ9NVU0 708 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 NEDD4P46934 1319 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 A0A1B0GVL5 298 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 CTAGE15A4D2H0 777 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 ZNF202O95125 648 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 FMNL1O95466 1100 aaPredicted RBP11.36□□□□□ -0.59
APTX-216ENST00000472896 PRR29P0C7W0 189 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 CTAGE8P0CG41 777 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 CMA1P23946 247 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 HIBADHP31937 336 aaKnown RBP11.36□□□□□ -0.59
APTX-216ENST00000472896 PPIL2Q13356 520 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 LDHAL6AQ6ZMR3 332 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 CTAGE6Q86UF2 777 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 CTAGE4Q8IX94 777 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 PRPF38AQ8NAV1 312 aaKnown RBP11.36□□□□□ -0.59
APTX-216ENST00000472896 GIMAP7Q8NHV1 300 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 NKX2-3Q8TAU0 364 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 RAET1EQ8TD07 263 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 FAM227BQ96M60 508 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 ADGRA2Q96PE1 1338 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 PANX2Q96RD6 677 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 WRNIP1Q96S55 665 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 HTATIP2Q9BUP3 242 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 UNC93B1Q9H1C4 597 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 GNL3LQ9NVN8 582 aaKnown RBP11.36□□□□□ -0.59
APTX-216ENST00000472896 MYO1AQ9UBC5 1043 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 NR2E3Q9Y5X4 410 aa11.36□□□□□ -0.59
APTX-216ENST00000472896 PTPDC1A2A3K4 754 aa11.35□□□□□ -0.59
APTX-216ENST00000472896 CTAGE9A4FU28 777 aa11.35□□□□□ -0.59
APTX-216ENST00000472896 PPP1R12AO14974 1030 aaPredicted RBP11.35□□□□□ -0.59
APTX-216ENST00000472896 INPP5BP32019 993 aa11.35□□□□□ -0.59
APTX-216ENST00000472896 TNNI2P48788 182 aa11.35□□□□□ -0.59
APTX-216ENST00000472896 MOGSQ13724 837 aa11.35□□□□□ -0.59
APTX-216ENST00000472896 SPECC1LQ69YQ0 1117 aa11.35□□□□□ -0.59
APTX-216ENST00000472896 BRAPQ7Z569 592 aa11.35□□□□□ -0.59
APTX-216ENST00000472896 ELOA2Q8IYF1 753 aaPredicted RBP11.35□□□□□ -0.59
APTX-216ENST00000472896 TCEANC2Q96MN5 208 aa11.35□□□□□ -0.59
APTX-216ENST00000472896 PUS3Q9BZE2 481 aaKnown RBP11.35□□□□□ -0.59
APTX-216ENST00000472896 RAI14Q9P0K7 980 aa11.35□□□□□ -0.59
APTX-216ENST00000472896 BIN2Q9UBW5 565 aaPredicted RBP11.35□□□□□ -0.59
APTX-216ENST00000472896 GABRQQ9UN88 632 aa11.35□□□□□ -0.59
APTX-216ENST00000472896 IQSEC3Q9UPP2 1182 aaPredicted RBP11.35□□□□□ -0.59
APTX-216ENST00000472896 FAM169AQ9Y6X4 670 aa11.35□□□□□ -0.59
APTX-216ENST00000472896 ARAP2Q8WZ64 1704 aa11.35□□□□□ -0.59
APTX-216ENST00000472896 RANBP2P49792 3224 aaKnown RBP11.35□□□□□ -0.59
APTX-216ENST00000472896 MYPNQ86TC9 1320 aa11.34□□□□□ -0.59
APTX-216ENST00000472896 SALL1Q9NSC2 1324 aa11.34□□□□□ -0.59
APTX-216ENST00000472896 PDHXO00330 501 aa11.34□□□□□ -0.59
APTX-216ENST00000472896 SPTLC2O15270 562 aa11.34□□□□□ -0.59
APTX-216ENST00000472896 FARP2O94887 1054 aaPredicted RBP11.34□□□□□ -0.59
APTX-216ENST00000472896 ATP1A3P13637 1013 aa11.34□□□□□ -0.59
APTX-216ENST00000472896 ERCC3P19447 782 aa11.34□□□□□ -0.59
APTX-216ENST00000472896 HOXD10P28358 340 aa11.34□□□□□ -0.59
APTX-216ENST00000472896 PRKCZQ05513 592 aa11.34□□□□□ -0.59
APTX-216ENST00000472896 NEDD9Q14511 834 aa11.34□□□□□ -0.59
APTX-216ENST00000472896 TOGARAM2Q6ZUX3 1019 aa11.34□□□□□ -0.59
APTX-216ENST00000472896 B4GALNT4Q76KP1 1039 aa11.34□□□□□ -0.59
APTX-216ENST00000472896 MIGA2Q7L4E1 593 aa11.34□□□□□ -0.59
APTX-216ENST00000472896 ANKRD23Q86SG2 305 aa11.34□□□□□ -0.59
APTX-216ENST00000472896 TC2NQ8N9U0 490 aa11.34□□□□□ -0.59
APTX-216ENST00000472896 U2AF1L4Q8WU68 220 aaKnown RBP11.34□□□□□ -0.59
APTX-216ENST00000472896 TBC1D22AQ8WUA7 517 aa11.34□□□□□ -0.59
APTX-216ENST00000472896 KAT2BQ92831 832 aa11.34□□□□□ -0.59
APTX-216ENST00000472896 CABS1Q96KC9 395 aa11.34□□□□□ -0.59
APTX-216ENST00000472896 FTOQ9C0B1 505 aaKnown RBP eCLIP11.34□□□□□ -0.59
APTX-216ENST00000472896 CNNM1Q9NRU3 951 aa11.34□□□□□ -0.59
APTX-216ENST00000472896 SGPL1O95470 568 aa11.33□□□□□ -0.59
APTX-216ENST00000472896 SYF2O95926 243 aaKnown RBP11.33□□□□□ -0.59
APTX-216ENST00000472896 VSNL1P62760 191 aa11.33□□□□□ -0.59
APTX-216ENST00000472896 PPFIA1Q13136 1202 aa11.33□□□□□ -0.59
APTX-216ENST00000472896 UBE4AQ14139 1066 aa11.33□□□□□ -0.59
APTX-216ENST00000472896 FBXO33Q7Z6M2 555 aa11.33□□□□□ -0.59
APTX-216ENST00000472896 AMOTL1Q8IY63 956 aa11.33□□□□□ -0.59
APTX-216ENST00000472896 CCDC148Q8NFR7 591 aa11.33□□□□□ -0.59
APTX-216ENST00000472896 FSD1Q9BTV5 496 aa11.33□□□□□ -0.59
APTX-216ENST00000472896 AGXT2Q9BYV1 514 aa11.33□□□□□ -0.59
APTX-216ENST00000472896 PUF60Q9UHX1 559 aaKnown RBP11.33□□□□□ -0.59
APTX-216ENST00000472896 A0A0D9SFI3 127 aa11.33□□□□□ -0.6
APTX-216ENST00000472896 FAM237AA0A1B0GTK4 181 aa11.33□□□□□ -0.6
APTX-216ENST00000472896 CCDC189A1A4V9 331 aa11.33□□□□□ -0.6
APTX-216ENST00000472896 TARSL2A2RTX5 802 aaKnown RBP11.33□□□□□ -0.6
APTX-216ENST00000472896 LRRIQ3A6PVS8 624 aaPredicted RBP11.33□□□□□ -0.6
APTX-216ENST00000472896 CHUKO15111 745 aa11.33□□□□□ -0.6
APTX-216ENST00000472896 LIG3P49916 1009 aa11.33□□□□□ -0.6
APTX-216ENST00000472896 PPATQ06203 517 aa11.33□□□□□ -0.6
APTX-216ENST00000472896 APOBEC3HQ6NTF7 200 aaKnown RBP11.33□□□□□ -0.6
APTX-216ENST00000472896 GPAT2Q6NUI2 795 aa11.33□□□□□ -0.6
APTX-216ENST00000472896 KCNV1Q6PIU1 500 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms