RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 RBM43Q6ZSC3 357 aaKnown RBP16.62■□□□□ 0.25
HIF3A-206ENST00000472815 PRPF38AQ8NAV1 312 aaKnown RBP16.62■□□□□ 0.25
HIF3A-206ENST00000472815 TBCKQ8TEA7 893 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 CLIC6Q96NY7 704 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 GLIS2Q9BZE0 524 aaPredicted RBP16.62■□□□□ 0.25
HIF3A-206ENST00000472815 RANBP17Q9H2T7 1088 aaKnown RBP16.62■□□□□ 0.25
HIF3A-206ENST00000472815 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.62■□□□□ 0.25
HIF3A-206ENST00000472815 HPSEQ9Y251 543 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 CCNT1O60563 726 aaKnown RBP16.62■□□□□ 0.25
HIF3A-206ENST00000472815 FOSP01100 380 aaPredicted RBP16.62■□□□□ 0.25
HIF3A-206ENST00000472815 TXLNAP40222 546 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 PRPHP41219 470 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 IREB2P48200 963 aaKnown RBP16.62■□□□□ 0.25
HIF3A-206ENST00000472815 CLK2P49760 499 aaKnown RBP16.62■□□□□ 0.25
HIF3A-206ENST00000472815 BACE1P56817 501 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 MTMR2Q13614 643 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 ZRSR1Q15695 479 aaKnown RBP16.62■□□□□ 0.25
HIF3A-206ENST00000472815 LETM2Q2VYF4 491 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 KIAA1755Q5JYT7 1200 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 ANP32BQ92688 251 aaKnown RBP16.62■□□□□ 0.25
HIF3A-206ENST00000472815 ZKSCAN4Q969J2 545 aaPredicted RBP16.62■□□□□ 0.25
HIF3A-206ENST00000472815 SLF1Q9BQI6 1058 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 GPBP1L1Q9HC44 474 aaPredicted RBP16.62■□□□□ 0.25
HIF3A-206ENST00000472815 NMRK2Q9NPI5 230 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 KCNH3Q9ULD8 1083 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 CSADQ9Y600 493 aa16.62■□□□□ 0.25
HIF3A-206ENST00000472815 LONP1P36776 959 aaKnown RBP16.61■□□□□ 0.25
HIF3A-206ENST00000472815 USH1GQ495M9 461 aa16.61■□□□□ 0.25
HIF3A-206ENST00000472815 GAS2L3Q86XJ1 694 aa16.61■□□□□ 0.25
HIF3A-206ENST00000472815 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.61■□□□□ 0.25
HIF3A-206ENST00000472815 TANGO6Q9C0B7 1094 aa16.61■□□□□ 0.25
HIF3A-206ENST00000472815 MRPL11Q9Y3B7 192 aaKnown RBP16.61■□□□□ 0.25
HIF3A-206ENST00000472815 CTDP1Q9Y5B0 961 aaPredicted RBP16.61■□□□□ 0.25
HIF3A-206ENST00000472815 SSC5DA1L4H1 1573 aa16.6■□□□□ 0.25
HIF3A-206ENST00000472815 NEMFO60524 1076 aa16.6■□□□□ 0.25
HIF3A-206ENST00000472815 CAVIN2O95810 425 aa16.6■□□□□ 0.25
HIF3A-206ENST00000472815 GCFC2P16383 781 aaKnown RBP16.6■□□□□ 0.25
HIF3A-206ENST00000472815 MAP3K9P80192 1104 aa16.6■□□□□ 0.25
HIF3A-206ENST00000472815 SPP2Q13103 211 aa16.6■□□□□ 0.25
HIF3A-206ENST00000472815 KANK3Q6NY19 840 aa16.6■□□□□ 0.25
HIF3A-206ENST00000472815 DTHD1Q6ZMT9 781 aa16.6■□□□□ 0.25
HIF3A-206ENST00000472815 CCDC84Q86UT8 332 aaPredicted RBP16.6■□□□□ 0.25
HIF3A-206ENST00000472815 RBM46Q8TBY0 533 aaKnown RBP16.6■□□□□ 0.25
HIF3A-206ENST00000472815 CSRNP2Q9H175 543 aa16.6■□□□□ 0.25
HIF3A-206ENST00000472815 TMOD4Q9NZQ9 345 aa16.6■□□□□ 0.25
HIF3A-206ENST00000472815 ZHX2Q9Y6X8 837 aa16.6■□□□□ 0.25
HIF3A-206ENST00000472815 ABCB11O95342 1321 aa16.6■□□□□ 0.25
HIF3A-206ENST00000472815 VWA3AA6NCI4 1184 aa16.59■□□□□ 0.25
HIF3A-206ENST00000472815 SPDYE3A6NKU9 549 aa16.59■□□□□ 0.25
HIF3A-206ENST00000472815 ADAMTS3O15072 1205 aa16.59■□□□□ 0.25
HIF3A-206ENST00000472815 EAPPQ56P03 285 aaPredicted RBP16.59■□□□□ 0.25
HIF3A-206ENST00000472815 ELOA2Q8IYF1 753 aaPredicted RBP16.59■□□□□ 0.25
HIF3A-206ENST00000472815 C12orf42Q96LP6 360 aa16.59■□□□□ 0.25
HIF3A-206ENST00000472815 EHMT1Q9H9B1 1298 aa16.59■□□□□ 0.25
HIF3A-206ENST00000472815 USP25Q9UHP3 1055 aa16.59■□□□□ 0.25
HIF3A-206ENST00000472815 PHIPQ8WWQ0 1821 aa16.59■□□□□ 0.25
HIF3A-206ENST00000472815 ADM5C9JUS6 153 aa16.59■□□□□ 0.25
HIF3A-206ENST00000472815 USP2O75604 605 aaPredicted RBP16.59■□□□□ 0.25
HIF3A-206ENST00000472815 VCAM1P19320 739 aa16.59■□□□□ 0.25
HIF3A-206ENST00000472815 PPP4R3AQ6IN85 833 aa16.59■□□□□ 0.25
HIF3A-206ENST00000472815 CKAP2LQ8IYA6 745 aa16.59■□□□□ 0.25
HIF3A-206ENST00000472815 CNNM3Q8NE01 707 aa16.59■□□□□ 0.25
HIF3A-206ENST00000472815 TMEM260Q9NX78 707 aa16.59■□□□□ 0.25
HIF3A-206ENST00000472815 PIK3CDO00329 1044 aa16.58■□□□□ 0.24
HIF3A-206ENST00000472815 WNT7AO00755 349 aa16.58■□□□□ 0.24
HIF3A-206ENST00000472815 FLOT1O75955 427 aa16.58■□□□□ 0.24
HIF3A-206ENST00000472815 OR52Z1P0C646 297 aa16.58■□□□□ 0.24
HIF3A-206ENST00000472815 USP11P51784 963 aa16.58■□□□□ 0.24
HIF3A-206ENST00000472815 UBE2SQ16763 222 aa16.58■□□□□ 0.24
HIF3A-206ENST00000472815 CCDC174Q6PII3 467 aa16.58■□□□□ 0.24
HIF3A-206ENST00000472815 AK8Q96MA6 479 aa16.58■□□□□ 0.24
HIF3A-206ENST00000472815 RAB34Q9BZG1 259 aa16.58■□□□□ 0.24
HIF3A-206ENST00000472815 MYH7BA7E2Y1 1941 aa16.57■□□□□ 0.24
HIF3A-206ENST00000472815 ZBED4O75132 1171 aa16.57■□□□□ 0.24
HIF3A-206ENST00000472815 ICAM1P05362 532 aa16.57■□□□□ 0.24
HIF3A-206ENST00000472815 SNAP25P60880 206 aa16.57■□□□□ 0.24
HIF3A-206ENST00000472815 TYRO3Q06418 890 aa16.57■□□□□ 0.24
HIF3A-206ENST00000472815 PRKG1Q13976 671 aa16.57■□□□□ 0.24
HIF3A-206ENST00000472815 SAMD1Q6SPF0 538 aaPredicted RBP16.57■□□□□ 0.24
HIF3A-206ENST00000472815 C4orf32Q8N8J7 132 aa16.57■□□□□ 0.24
HIF3A-206ENST00000472815 ANO3Q9BYT9 981 aa16.57■□□□□ 0.24
HIF3A-206ENST00000472815 RPAP3Q9H6T3 665 aaPredicted RBP16.57■□□□□ 0.24
HIF3A-206ENST00000472815 EMILIN3Q9NT22 766 aa16.57■□□□□ 0.24
HIF3A-206ENST00000472815 USP17L15C9J2P7 530 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 USP17L13C9JLJ4 530 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 USP17L11C9JVI0 530 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 USP17L18D6R9N7 530 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 USP17L22D6RA61 530 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 USP17L17D6RBQ6 530 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 USP17L19D6RCP7 530 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 USP17L20D6RJB6 530 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 USP17L24Q0WX57 530 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 TMEM266Q2M3C6 531 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 USP17L6PQ6QN14 398 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 MOXD1Q6UVY6 613 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 KRBA2Q6ZNG9 492 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 LDHDQ86WU2 507 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 ANKRD13AQ8IZ07 590 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 SAMD3Q8N6K7 520 aa16.56■□□□□ 0.24
HIF3A-206ENST00000472815 CDCA5Q96FF9 252 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms