RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	CLTB	P09497	229 aa		10.49	□□□□□ -0.73
CHEK2-223	ENST00000472807	C6orf222	P0C671	652 aa	Predicted RBP	10.49	□□□□□ -0.73
CHEK2-223	ENST00000472807	ATXN8OS	P0DMR3	200 aa		10.49	□□□□□ -0.73
CHEK2-223	ENST00000472807	PDHB	P11177	359 aa		10.49	□□□□□ -0.73
CHEK2-223	ENST00000472807	SLC16A2	P36021	539 aa		10.49	□□□□□ -0.73
CHEK2-223	ENST00000472807	ACLY	P53396	1101 aa		10.49	□□□□□ -0.73
CHEK2-223	ENST00000472807	CCDC178	Q5BJE1	867 aa		10.49	□□□□□ -0.73
CHEK2-223	ENST00000472807	BTNL9	Q6UXG8	535 aa		10.49	□□□□□ -0.73
CHEK2-223	ENST00000472807	NSMF	Q6X4W1	530 aa		10.49	□□□□□ -0.73
CHEK2-223	ENST00000472807	TTC14	Q96N46	770 aa		10.49	□□□□□ -0.73
CHEK2-223	ENST00000472807	RANBP17	Q9H2T7	1088 aa	Known RBP	10.49	□□□□□ -0.73
CHEK2-223	ENST00000472807	GPCPD1	Q9NPB8	672 aa		10.49	□□□□□ -0.73
CHEK2-223	ENST00000472807	STARD7	Q9NQZ5	370 aa		10.49	□□□□□ -0.73
CHEK2-223	ENST00000472807	PNMA2	Q9UL42	364 aa		10.49	□□□□□ -0.73
CHEK2-223	ENST00000472807	FRMPD2	Q68DX3	1309 aa	Predicted RBP	10.49	□□□□□ -0.73
CHEK2-223	ENST00000472807	LRRC37A2	A6NM11	1700 aa		10.48	□□□□□ -0.73
CHEK2-223	ENST00000472807	UNC80	Q8N2C7	3258 aa		10.48	□□□□□ -0.73
CHEK2-223	ENST00000472807	CST5	P28325	142 aa	Predicted RBP	10.48	□□□□□ -0.73
CHEK2-223	ENST00000472807	TLE2	Q04725	743 aa		10.48	□□□□□ -0.73
CHEK2-223	ENST00000472807	KCNA10	Q16322	511 aa		10.48	□□□□□ -0.73
CHEK2-223	ENST00000472807	IMMT	Q16891	758 aa	Known RBP	10.48	□□□□□ -0.73
CHEK2-223	ENST00000472807	MUM1L1	Q5H9M0	696 aa		10.48	□□□□□ -0.73
CHEK2-223	ENST00000472807	TTBK2	Q6IQ55	1244 aa		10.48	□□□□□ -0.73
CHEK2-223	ENST00000472807	NOL8	Q76FK4	1167 aa	Known RBP	10.48	□□□□□ -0.73
CHEK2-223	ENST00000472807	IQCA1	Q86XH1	822 aa		10.48	□□□□□ -0.73
CHEK2-223	ENST00000472807	PCSK9	Q8NBP7	692 aa	Known RBP	10.48	□□□□□ -0.73
CHEK2-223	ENST00000472807	KLHDC9	Q8NEP7	349 aa		10.48	□□□□□ -0.73
CHEK2-223	ENST00000472807	GLT1D1	Q96MS3	346 aa		10.48	□□□□□ -0.73
CHEK2-223	ENST00000472807	DSCC1	Q9BVC3	393 aa		10.48	□□□□□ -0.73
CHEK2-223	ENST00000472807	UPF3A	Q9H1J1	476 aa	Known RBP	10.48	□□□□□ -0.73
CHEK2-223	ENST00000472807	CYP39A1	Q9NYL5	469 aa		10.48	□□□□□ -0.73
CHEK2-223	ENST00000472807	CTNNA3	Q9UI47	895 aa		10.48	□□□□□ -0.73
CHEK2-223	ENST00000472807	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.48	□□□□□ -0.73
CHEK2-223	ENST00000472807	TRIM43B	A6NCK2	446 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	MYADML2	A6NDP7	307 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	SOWAHB	A6NEL2	793 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	DCDC2C	A8MYV0	355 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	ADCY6	O43306	1168 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	KDM4A	O75164	1064 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	SNHG28	P0DPA3	235 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	GJA9	P57773	515 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	TNFAIP2	Q03169	654 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	ZNF543	Q08ER8	600 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	GNAS	Q5JWF2	1037 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	GPATCH4	Q5T3I0	446 aa	Known RBP	10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	CCSAP	Q6IQ19	270 aa	Predicted RBP	10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	ANKRD33	Q7Z3H0	272 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	SH3RF1	Q7Z6J0	888 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	DGKH	Q86XP1	1220 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	DEFB123	Q8N688	67 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	BAD	Q92934	168 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	KATNBL1	Q9H079	304 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	TMEM39A	Q9NV64	488 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	ELP1	O95163	1332 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	MROH7	Q68CQ1	1323 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	EYS	Q5T1H1	3165 aa		10.47	□□□□□ -0.73
CHEK2-223	ENST00000472807	LCT	P09848	1927 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807		A0A0U1RQG5	324 aa	Predicted RBP	10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	PTPDC1	A2A3K4	754 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	KIAA0355	O15063	1070 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	ASGR1	P07306	291 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	RAG1	P15918	1043 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	TTC22	Q5TAA0	569 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	TLK2	Q86UE8	772 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	FBXO16	Q8IX29	292 aa	Predicted RBP	10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	PNMA1	Q8ND90	353 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	VTI1A	Q96AJ9	217 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	TOX2	Q96NM4	488 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	MPHOSPH6	Q99547	160 aa	Known RBP	10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	ZKSCAN3	Q9BRR0	538 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	KRT23	Q9C075	422 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	AP5M1	Q9H0R1	490 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	KAT14	Q9H8E8	782 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	CNNM2	Q9H8M5	875 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	VTA1	Q9NP79	307 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	ADD3	Q9UEY8	706 aa	Known RBP	10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	ASTN1	O14525	1302 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	WDR19	Q8NEZ3	1342 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	RAD50	Q92878	1312 aa		10.46	□□□□□ -0.73
CHEK2-223	ENST00000472807	LOC102724159	A0A0B4J2E5	919 aa		10.45	□□□□□ -0.74
CHEK2-223	ENST00000472807	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	10.45	□□□□□ -0.74
CHEK2-223	ENST00000472807		B4E1Z4	1266 aa		10.45	□□□□□ -0.74
CHEK2-223	ENST00000472807	NFIB	O00712	420 aa		10.45	□□□□□ -0.74
CHEK2-223	ENST00000472807	ZEB2	O60315	1214 aa		10.45	□□□□□ -0.74
CHEK2-223	ENST00000472807	BAAT	Q14032	418 aa	Predicted RBP	10.45	□□□□□ -0.74
CHEK2-223	ENST00000472807	PWP2	Q15269	919 aa	Known RBP	10.45	□□□□□ -0.74
CHEK2-223	ENST00000472807	FSCN1	Q16658	493 aa	Known RBP	10.45	□□□□□ -0.74
CHEK2-223	ENST00000472807		Q7L0L9	218 aa		10.45	□□□□□ -0.74
CHEK2-223	ENST00000472807	EEPD1	Q7L9B9	569 aa		10.45	□□□□□ -0.74
CHEK2-223	ENST00000472807	RUFY2	Q8WXA3	655 aa		10.45	□□□□□ -0.74
CHEK2-223	ENST00000472807	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.45	□□□□□ -0.74
CHEK2-223	ENST00000472807	UBAC1	Q9BSL1	405 aa		10.45	□□□□□ -0.74
CHEK2-223	ENST00000472807	CUL9	Q8IWT3	2517 aa		10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	TNKS	O95271	1327 aa		10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	PRUNE2	Q8WUY3	3088 aa		10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	TLR3	O15455	904 aa	Known RBP	10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	CABYR	O75952	493 aa		10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	GOLGA8H	P0CJ92	632 aa		10.44	□□□□□ -0.74
CHEK2-223	ENST00000472807	GSPT1	P15170	499 aa	Known RBP	10.44	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms