RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 WDR78Q5VTH9 848 aa20.03■□□□□ 0.8
PKD1-208ENST00000472577 SNRNP48Q6IEG0 339 aaKnown RBP20.03■□□□□ 0.8
PKD1-208ENST00000472577 NCAPG2Q86XI2 1143 aa20.03■□□□□ 0.8
PKD1-208ENST00000472577 CCAR1Q8IX12 1150 aaKnown RBP20.03■□□□□ 0.8
PKD1-208ENST00000472577 CCDC144CPQ8IYA2 1237 aa20.03■□□□□ 0.8
PKD1-208ENST00000472577 ADGRF4Q8IZF3 695 aa20.03■□□□□ 0.8
PKD1-208ENST00000472577 SLC25A27O95847 323 aa20.02■□□□□ 0.8
PKD1-208ENST00000472577 TAL1P17542 331 aaPredicted RBP20.02■□□□□ 0.8
PKD1-208ENST00000472577 SLC4A3P48751 1232 aa20.02■□□□□ 0.8
PKD1-208ENST00000472577 TOB2Q14106 344 aaPredicted RBP20.02■□□□□ 0.8
PKD1-208ENST00000472577 PLEKHH3Q7Z736 793 aa20.02■□□□□ 0.8
PKD1-208ENST00000472577 MICU3Q86XE3 530 aa20.02■□□□□ 0.8
PKD1-208ENST00000472577 CTCFLQ8NI51 663 aaPredicted RBP20.02■□□□□ 0.8
PKD1-208ENST00000472577 AGBL1Q96MI9 1066 aa20.02■□□□□ 0.8
PKD1-208ENST00000472577 APBA2Q99767 749 aa20.02■□□□□ 0.8
PKD1-208ENST00000472577 C22orf23Q9BZE7 217 aa20.02■□□□□ 0.8
PKD1-208ENST00000472577 CALM1P0DP23 149 aa20.01■□□□□ 0.79
PKD1-208ENST00000472577 CALM2P0DP24 149 aa20.01■□□□□ 0.79
PKD1-208ENST00000472577 CALM3P0DP25 149 aa20.01■□□□□ 0.79
PKD1-208ENST00000472577 COL6A1P12109 1028 aa20.01■□□□□ 0.79
PKD1-208ENST00000472577 LHX8Q68G74 356 aa20.01■□□□□ 0.79
PKD1-208ENST00000472577 SYNE3Q6ZMZ3 975 aa20.01■□□□□ 0.79
PKD1-208ENST00000472577 BACH2Q9BYV9 841 aa20.01■□□□□ 0.79
PKD1-208ENST00000472577 MROH8Q9H579 483 aa20.01■□□□□ 0.79
PKD1-208ENST00000472577 JMJD4Q9H9V9 463 aa20.01■□□□□ 0.79
PKD1-208ENST00000472577 CWC22Q9HCG8 908 aaKnown RBP20.01■□□□□ 0.79
PKD1-208ENST00000472577 VAT1LQ9HCJ6 419 aa20.01■□□□□ 0.79
PKD1-208ENST00000472577 PDRG1Q9NUG6 133 aa20.01■□□□□ 0.79
PKD1-208ENST00000472577 ZBTB43O43298 467 aa20■□□□□ 0.79
PKD1-208ENST00000472577 CYTH3O43739 400 aa20■□□□□ 0.79
PKD1-208ENST00000472577 DHX16O60231 1041 aaKnown RBP20■□□□□ 0.79
PKD1-208ENST00000472577 ICAM1P05362 532 aa20■□□□□ 0.79
PKD1-208ENST00000472577 PTPREP23469 700 aa20■□□□□ 0.79
PKD1-208ENST00000472577 KIF5BP33176 963 aa20■□□□□ 0.79
PKD1-208ENST00000472577 RGS2P41220 211 aa20■□□□□ 0.79
PKD1-208ENST00000472577 RBM25P49756 843 aaKnown RBP20■□□□□ 0.79
PKD1-208ENST00000472577 CDC37Q16543 378 aaPredicted RBP20■□□□□ 0.79
PKD1-208ENST00000472577 Q7L0L9 218 aa20■□□□□ 0.79
PKD1-208ENST00000472577 FANCBQ8NB91 859 aa20■□□□□ 0.79
PKD1-208ENST00000472577 KIF2CQ99661 725 aa20■□□□□ 0.79
PKD1-208ENST00000472577 PLEKHA8P1O95397 391 aa19.99■□□□□ 0.79
PKD1-208ENST00000472577 COPB2P35606 906 aa19.99■□□□□ 0.79
PKD1-208ENST00000472577 LRRC26Q2I0M4 334 aa19.99■□□□□ 0.79
PKD1-208ENST00000472577 SLC17A8Q8NDX2 589 aa19.99■□□□□ 0.79
PKD1-208ENST00000472577 MTMR8Q96EF0 704 aa19.99■□□□□ 0.79
PKD1-208ENST00000472577 RIOX1Q9H6W3 641 aa19.99■□□□□ 0.79
PKD1-208ENST00000472577 FLRT1Q9NZU1 646 aa19.99■□□□□ 0.79
PKD1-208ENST00000472577 CCPG1Q9ULG6 757 aa19.99■□□□□ 0.79
PKD1-208ENST00000472577 NAP1L2Q9ULW6 460 aaPredicted RBP19.99■□□□□ 0.79
PKD1-208ENST00000472577 ZNF236Q9UL36 1845 aa19.98■□□□□ 0.79
PKD1-208ENST00000472577 SLC15A5A6NIM6 579 aa19.98■□□□□ 0.79
PKD1-208ENST00000472577 GOLGA8BA8MQT2 603 aa19.98■□□□□ 0.79
PKD1-208ENST00000472577 ALAS1P13196 640 aa19.98■□□□□ 0.79
PKD1-208ENST00000472577 EVCP57679 992 aa19.98■□□□□ 0.79
PKD1-208ENST00000472577 MAP2K5Q13163 448 aa19.98■□□□□ 0.79
PKD1-208ENST00000472577 GRB14Q14449 540 aa19.98■□□□□ 0.79
PKD1-208ENST00000472577 QRICH1Q2TAL8 776 aa19.98■□□□□ 0.79
PKD1-208ENST00000472577 TRMT44Q8IYL2 757 aaKnown RBP19.98■□□□□ 0.79
PKD1-208ENST00000472577 CMTR1Q8N1G2 835 aaKnown RBP19.98■□□□□ 0.79
PKD1-208ENST00000472577 SRBD1Q8N5C6 995 aaKnown RBP19.98■□□□□ 0.79
PKD1-208ENST00000472577 LARP6Q9BRS8 491 aaKnown RBP19.98■□□□□ 0.79
PKD1-208ENST00000472577 HOMER2Q9NSB8 354 aa19.98■□□□□ 0.79
PKD1-208ENST00000472577 FAM217BQ9NTX9 383 aaPredicted RBP19.98■□□□□ 0.79
PKD1-208ENST00000472577 IVNS1ABPQ9Y6Y0 642 aa19.98■□□□□ 0.79
PKD1-208ENST00000472577 SMCHD1A6NHR9 2005 aa19.98■□□□□ 0.79
PKD1-208ENST00000472577 GOLGA8AA7E2F4 631 aa19.97■□□□□ 0.79
PKD1-208ENST00000472577 CDC27P30260 824 aa19.97■□□□□ 0.79
PKD1-208ENST00000472577 GNAQP50148 359 aa19.97■□□□□ 0.79
PKD1-208ENST00000472577 RCAN1P53805 252 aa19.97■□□□□ 0.79
PKD1-208ENST00000472577 RTN1Q16799 776 aa19.97■□□□□ 0.79
PKD1-208ENST00000472577 TMTC3Q6ZXV5 915 aa19.97■□□□□ 0.79
PKD1-208ENST00000472577 TDHQ8IZJ6 230 aa19.97■□□□□ 0.79
PKD1-208ENST00000472577 PIGSQ96S52 555 aa19.97■□□□□ 0.79
PKD1-208ENST00000472577 ALDH8A1Q9H2A2 487 aaPredicted RBP19.97■□□□□ 0.79
PKD1-208ENST00000472577 UPF2Q9HAU5 1272 aaKnown RBP19.97■□□□□ 0.79
PKD1-208ENST00000472577 RNF146Q9NTX7 359 aa19.97■□□□□ 0.79
PKD1-208ENST00000472577 NID2Q14112 1375 aa19.96■□□□□ 0.79
PKD1-208ENST00000472577 STRNO43815 780 aa19.96■□□□□ 0.79
PKD1-208ENST00000472577 FCER1AP12319 257 aa19.96■□□□□ 0.79
PKD1-208ENST00000472577 SMARCA1P28370 1054 aa19.96■□□□□ 0.79
PKD1-208ENST00000472577 ADORA2AP29274 412 aa19.96■□□□□ 0.79
PKD1-208ENST00000472577 PDIA3P30101 505 aaKnown RBP19.96■□□□□ 0.79
PKD1-208ENST00000472577 TKFCQ3LXA3 575 aa19.96■□□□□ 0.79
PKD1-208ENST00000472577 LRIT3Q3SXY7 679 aa19.96■□□□□ 0.79
PKD1-208ENST00000472577 MUM1L1Q5H9M0 696 aa19.96■□□□□ 0.79
PKD1-208ENST00000472577 HOMER1Q86YM7 354 aa19.96■□□□□ 0.79
PKD1-208ENST00000472577 ABRAQ8N0Z2 381 aa19.96■□□□□ 0.79
PKD1-208ENST00000472577 DEFB123Q8N688 67 aa19.96■□□□□ 0.79
PKD1-208ENST00000472577 CHST13Q8NET6 341 aa19.96■□□□□ 0.79
PKD1-208ENST00000472577 TRERF1Q96PN7 1200 aa19.96■□□□□ 0.79
PKD1-208ENST00000472577 MMP19Q99542 508 aa19.96■□□□□ 0.79
PKD1-208ENST00000472577 LZTS2Q9BRK4 669 aa19.96■□□□□ 0.79
PKD1-208ENST00000472577 SPZ1Q9BXG8 430 aa19.96■□□□□ 0.79
PKD1-208ENST00000472577 RBM28Q9NW13 759 aaKnown RBP19.96■□□□□ 0.79
PKD1-208ENST00000472577 DNAH12Q6ZR08 3092 aa19.95■□□□□ 0.78
PKD1-208ENST00000472577 ZBTB5O15062 677 aa19.95■□□□□ 0.78
PKD1-208ENST00000472577 PPP1R11O60927 126 aaPredicted RBP19.95■□□□□ 0.78
PKD1-208ENST00000472577 METAP2P50579 478 aaKnown RBP eCLIP19.95■□□□□ 0.785e-6■□□□□ 9.7
PKD1-208ENST00000472577 NEK4P51957 841 aa19.95■□□□□ 0.78
PKD1-208ENST00000472577 AK2P54819 239 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms