RNA–Protein interactions for RNA: ENST00000472381.5

RPUSD3-213, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 823 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-213ENST00000472381 ZNF589Q86UQ0 364 aaPredicted RBP23.7■■□□□ 1.38
RPUSD3-213ENST00000472381 SMC5Q8IY18 1101 aa23.7■■□□□ 1.38
RPUSD3-213ENST00000472381 FAM161BQ96MY7 647 aa23.7■■□□□ 1.38
RPUSD3-213ENST00000472381 CYP39A1Q9NYL5 469 aa23.7■■□□□ 1.38
RPUSD3-213ENST00000472381 LRRC37A2A6NM11 1700 aa23.7■■□□□ 1.38
RPUSD3-213ENST00000472381 MFAP1P55081 439 aaKnown RBP23.69■■□□□ 1.38
RPUSD3-213ENST00000472381 HAND2P61296 217 aa23.69■■□□□ 1.38
RPUSD3-213ENST00000472381 NSMFQ6X4W1 530 aa23.69■■□□□ 1.38
RPUSD3-213ENST00000472381 TMEM47Q9BQJ4 181 aa23.69■■□□□ 1.38
RPUSD3-213ENST00000472381 RANBP17Q9H2T7 1088 aaKnown RBP23.69■■□□□ 1.38
RPUSD3-213ENST00000472381 TCP11L1Q9NUJ3 509 aa23.69■■□□□ 1.38
RPUSD3-213ENST00000472381 PCP11498 1178 aaKnown RBP23.68■■□□□ 1.38
RPUSD3-213ENST00000472381 SLC16A2P36021 539 aa23.68■■□□□ 1.38
RPUSD3-213ENST00000472381 SMAD3P84022 425 aaKnown RBP23.68■■□□□ 1.38
RPUSD3-213ENST00000472381 SYDE2Q5VT97 1194 aa23.68■■□□□ 1.38
RPUSD3-213ENST00000472381 MFSD6Q6ZSS7 791 aa23.68■■□□□ 1.38
RPUSD3-213ENST00000472381 RNPC3Q96LT9 517 aaKnown RBP23.68■■□□□ 1.38
RPUSD3-213ENST00000472381 GUCD1Q96NT3 240 aa23.68■■□□□ 1.38
RPUSD3-213ENST00000472381 FRMPD2Q68DX3 1309 aaPredicted RBP23.67■■□□□ 1.38
RPUSD3-213ENST00000472381 A0A0U1RQG5 324 aaPredicted RBP23.67■■□□□ 1.38
RPUSD3-213ENST00000472381 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.67■■□□□ 1.38
RPUSD3-213ENST00000472381 AKNAD1Q5T1N1 836 aa23.67■■□□□ 1.38
RPUSD3-213ENST00000472381 TTBK2Q6IQ55 1244 aa23.67■■□□□ 1.38
RPUSD3-213ENST00000472381 BTNL9Q6UXG8 535 aa23.67■■□□□ 1.38
RPUSD3-213ENST00000472381 CHD1LQ86WJ1 897 aa23.67■■□□□ 1.38
RPUSD3-213ENST00000472381 RNF41Q9H4P4 317 aaPredicted RBP23.67■■□□□ 1.38
RPUSD3-213ENST00000472381 GPCPD1Q9NPB8 672 aa23.67■■□□□ 1.38
RPUSD3-213ENST00000472381 ASTN1O14525 1302 aa23.66■■□□□ 1.38
RPUSD3-213ENST00000472381 ARVCFO00192 962 aa23.66■■□□□ 1.38
RPUSD3-213ENST00000472381 TIMP1P01033 207 aa23.66■■□□□ 1.38
RPUSD3-213ENST00000472381 CDK7P50613 346 aa23.66■■□□□ 1.38
RPUSD3-213ENST00000472381 EPHB4P54760 987 aa23.66■■□□□ 1.38
RPUSD3-213ENST00000472381 NKX3-2P78367 333 aa23.66■■□□□ 1.38
RPUSD3-213ENST00000472381 TLK2Q86UE8 772 aa23.66■■□□□ 1.38
RPUSD3-213ENST00000472381 AP5M1Q9H0R1 490 aa23.66■■□□□ 1.38
RPUSD3-213ENST00000472381 TBX21Q9UL17 535 aa23.66■■□□□ 1.38
RPUSD3-213ENST00000472381 LCTP09848 1927 aa23.66■■□□□ 1.38
RPUSD3-213ENST00000472381 DLL1O00548 723 aa23.65■■□□□ 1.38
RPUSD3-213ENST00000472381 CTAGE5O15320 804 aa23.65■■□□□ 1.38
RPUSD3-213ENST00000472381 TLR3O15455 904 aaKnown RBP23.65■■□□□ 1.38
RPUSD3-213ENST00000472381 SDSP20132 328 aa23.65■■□□□ 1.38
RPUSD3-213ENST00000472381 BEX3Q00994 111 aa23.65■■□□□ 1.38
RPUSD3-213ENST00000472381 EEPD1Q7L9B9 569 aa23.65■■□□□ 1.38
RPUSD3-213ENST00000472381 TTC14Q96N46 770 aa23.65■■□□□ 1.38
RPUSD3-213ENST00000472381 GNEQ9Y223 722 aaKnown RBP23.65■■□□□ 1.38
RPUSD3-213ENST00000472381 PDHBP11177 359 aa23.64■■□□□ 1.37
RPUSD3-213ENST00000472381 NUCB1Q02818 461 aa23.64■■□□□ 1.37
RPUSD3-213ENST00000472381 FSCN1Q16658 493 aaKnown RBP23.64■■□□□ 1.37
RPUSD3-213ENST00000472381 TBC1D10CQ8IV04 446 aa23.64■■□□□ 1.37
RPUSD3-213ENST00000472381 PLEKHM2Q8IWE5 1019 aa23.64■■□□□ 1.37
RPUSD3-213ENST00000472381 FBXO16Q8IX29 292 aaPredicted RBP23.64■■□□□ 1.37
RPUSD3-213ENST00000472381 ESR2Q92731 530 aa23.64■■□□□ 1.37
RPUSD3-213ENST00000472381 OSBPL3Q9H4L5 887 aa23.64■■□□□ 1.37
RPUSD3-213ENST00000472381 VTA1Q9NP79 307 aa23.64■■□□□ 1.37
RPUSD3-213ENST00000472381 ADD3Q9UEY8 706 aaKnown RBP23.64■■□□□ 1.37
RPUSD3-213ENST00000472381 PNMA2Q9UL42 364 aa23.64■■□□□ 1.37
RPUSD3-213ENST00000472381 LAMA4Q16363 1823 aa23.63■■□□□ 1.37
RPUSD3-213ENST00000472381 ZEB2O60315 1214 aa23.63■■□□□ 1.37
RPUSD3-213ENST00000472381 CABYRO75952 493 aa23.63■■□□□ 1.37
RPUSD3-213ENST00000472381 SMPD1P17405 629 aa23.63■■□□□ 1.37
RPUSD3-213ENST00000472381 BAATQ14032 418 aaPredicted RBP23.63■■□□□ 1.37
RPUSD3-213ENST00000472381 IQSEC1Q6DN90 963 aa23.63■■□□□ 1.37
RPUSD3-213ENST00000472381 SEMA6BQ9H3T3 888 aa23.63■■□□□ 1.37
RPUSD3-213ENST00000472381 PDGFCQ9NRA1 345 aa23.63■■□□□ 1.37
RPUSD3-213ENST00000472381 DDX49Q9Y6V7 483 aaKnown RBP23.63■■□□□ 1.37
RPUSD3-213ENST00000472381 PTPDC1A2A3K4 754 aa23.62■■□□□ 1.37
RPUSD3-213ENST00000472381 NFIBO00712 420 aa23.62■■□□□ 1.37
RPUSD3-213ENST00000472381 ZNF213O14771 459 aa23.62■■□□□ 1.37
RPUSD3-213ENST00000472381 DYNC1LI2O43237 492 aaPredicted RBP23.62■■□□□ 1.37
RPUSD3-213ENST00000472381 IGHDP01880 384 aa23.62■■□□□ 1.37
RPUSD3-213ENST00000472381 ZNF543Q08ER8 600 aa23.62■■□□□ 1.37
RPUSD3-213ENST00000472381 MFSD5Q6N075 450 aa23.62■■□□□ 1.37
RPUSD3-213ENST00000472381 TAPT1Q6NXT6 567 aa23.62■■□□□ 1.37
RPUSD3-213ENST00000472381 CXCL17Q6UXB2 119 aa23.62■■□□□ 1.37
RPUSD3-213ENST00000472381 FAM126BQ8IXS8 530 aa23.62■■□□□ 1.37
RPUSD3-213ENST00000472381 PURBQ96QR8 312 aaKnown RBP23.62■■□□□ 1.37
RPUSD3-213ENST00000472381 DIAPH3Q9NSV4 1193 aa23.62■■□□□ 1.37
RPUSD3-213ENST00000472381 Q9Y3F1 56 aa23.62■■□□□ 1.37
RPUSD3-213ENST00000472381 A0A0C4DFX4 3053 aa23.61■■□□□ 1.37
RPUSD3-213ENST00000472381 PPIGQ13427 754 aaKnown RBP eCLIP23.61■■□□□ 1.37
RPUSD3-213ENST00000472381 CWC27Q6UX04 472 aaKnown RBP23.61■■□□□ 1.37
RPUSD3-213ENST00000472381 KIAA1211Q6ZU35 1233 aa23.61■■□□□ 1.37
RPUSD3-213ENST00000472381 MORC4Q8TE76 937 aa23.61■■□□□ 1.37
RPUSD3-213ENST00000472381 CDX2Q99626 313 aaPredicted RBP23.61■■□□□ 1.37
RPUSD3-213ENST00000472381 NEDD4P46934 1319 aa23.6■■□□□ 1.37
RPUSD3-213ENST00000472381 LOC102724159A0A0B4J2E5 919 aa23.6■■□□□ 1.37
RPUSD3-213ENST00000472381 HIP1O00291 1037 aa23.6■■□□□ 1.37
RPUSD3-213ENST00000472381 NT5C2P49902 561 aa23.6■■□□□ 1.37
RPUSD3-213ENST00000472381 ALDH5A1P51649 535 aaPredicted RBP23.6■■□□□ 1.37
RPUSD3-213ENST00000472381 PWP2Q15269 919 aaKnown RBP23.6■■□□□ 1.37
RPUSD3-213ENST00000472381 TMEM199Q8N511 208 aa23.6■■□□□ 1.37
RPUSD3-213ENST00000472381 SNHG28P0DPA3 235 aa23.59■■□□□ 1.37
RPUSD3-213ENST00000472381 CALML3P27482 149 aa23.59■■□□□ 1.37
RPUSD3-213ENST00000472381 GPATCH4Q5T3I0 446 aaKnown RBP23.59■■□□□ 1.37
RPUSD3-213ENST00000472381 RNF207Q6ZRF8 634 aa23.59■■□□□ 1.37
RPUSD3-213ENST00000472381 DGKHQ86XP1 1220 aa23.59■■□□□ 1.37
RPUSD3-213ENST00000472381 EXOC6Q8TAG9 804 aa23.59■■□□□ 1.37
RPUSD3-213ENST00000472381 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.59■■□□□ 1.378e-7■■■■■ 32.7
RPUSD3-213ENST00000472381 ZKSCAN3Q9BRR0 538 aa23.59■■□□□ 1.37
RPUSD3-213ENST00000472381 SEZ6LQ9BYH1 1024 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms