RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 SMAD3P84022 425 aaKnown RBP11.62□□□□□ -0.55
NUDCD3-205ENST00000472246 TNFAIP2Q03169 654 aa11.62□□□□□ -0.55
NUDCD3-205ENST00000472246 ALX1Q15699 326 aa11.62□□□□□ -0.55
NUDCD3-205ENST00000472246 TKFCQ3LXA3 575 aa11.62□□□□□ -0.55
NUDCD3-205ENST00000472246 MCMDC2Q4G0Z9 681 aa11.62□□□□□ -0.55
NUDCD3-205ENST00000472246 GNASQ5JWF2 1037 aa11.62□□□□□ -0.55
NUDCD3-205ENST00000472246 TMEM63BQ5T3F8 832 aa11.62□□□□□ -0.55
NUDCD3-205ENST00000472246 TTBK2Q6IQ55 1244 aa11.62□□□□□ -0.55
NUDCD3-205ENST00000472246 NSMFQ6X4W1 530 aa11.62□□□□□ -0.55
NUDCD3-205ENST00000472246 EEPD1Q7L9B9 569 aa11.62□□□□□ -0.55
NUDCD3-205ENST00000472246 FBXO16Q8IX29 292 aaPredicted RBP11.62□□□□□ -0.55
NUDCD3-205ENST00000472246 PCSK9Q8NBP7 692 aaKnown RBP11.62□□□□□ -0.55
NUDCD3-205ENST00000472246 DCAF4Q8WV16 495 aa11.62□□□□□ -0.55
NUDCD3-205ENST00000472246 VTI1AQ96AJ9 217 aa11.62□□□□□ -0.55
NUDCD3-205ENST00000472246 CDX2Q99626 313 aaPredicted RBP11.62□□□□□ -0.55
NUDCD3-205ENST00000472246 SEMA6BQ9H3T3 888 aa11.62□□□□□ -0.55
NUDCD3-205ENST00000472246 CCPG1Q9ULG6 757 aa11.62□□□□□ -0.55
NUDCD3-205ENST00000472246 FRMPD2Q68DX3 1309 aaPredicted RBP11.61□□□□□ -0.55
NUDCD3-205ENST00000472246 CUL9Q8IWT3 2517 aa11.61□□□□□ -0.55
NUDCD3-205ENST00000472246 A0A0U1RQG5 324 aaPredicted RBP11.61□□□□□ -0.55
NUDCD3-205ENST00000472246 TRIM6-TRIM34B2RNG4 842 aa11.61□□□□□ -0.55
NUDCD3-205ENST00000472246 TIMP1P01033 207 aa11.61□□□□□ -0.55
NUDCD3-205ENST00000472246 ICAM1P05362 532 aa11.61□□□□□ -0.55
NUDCD3-205ENST00000472246 HSPD1P10809 573 aaKnown RBP11.61□□□□□ -0.55
NUDCD3-205ENST00000472246 CDK7P50613 346 aa11.61□□□□□ -0.55
NUDCD3-205ENST00000472246 NOL8Q76FK4 1167 aaKnown RBP11.61□□□□□ -0.55
NUDCD3-205ENST00000472246 TLK2Q86UE8 772 aa11.61□□□□□ -0.55
NUDCD3-205ENST00000472246 TMEM47Q9BQJ4 181 aa11.61□□□□□ -0.55
NUDCD3-205ENST00000472246 RANBP17Q9H2T7 1088 aaKnown RBP11.61□□□□□ -0.55
NUDCD3-205ENST00000472246 GPCPD1Q9NPB8 672 aa11.61□□□□□ -0.55
NUDCD3-205ENST00000472246 PDGFCQ9NRA1 345 aa11.61□□□□□ -0.55
NUDCD3-205ENST00000472246 CYP39A1Q9NYL5 469 aa11.61□□□□□ -0.55
NUDCD3-205ENST00000472246 GNEQ9Y223 722 aaKnown RBP11.61□□□□□ -0.55
NUDCD3-205ENST00000472246 MROH7Q68CQ1 1323 aa11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 CCDC171Q6TFL3 1326 aa11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 ASB14A6NK59 587 aa11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 ARVCFO00192 962 aa11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 NFIBO00712 420 aa11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 TOP1P11387 765 aaKnown RBP11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 SMPD1P17405 629 aa11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 SYDE2Q5VT97 1194 aa11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 B4GALNT3Q6L9W6 998 aa11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 MFSD5Q6N075 450 aa11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 CXCL17Q6UXB2 119 aa11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 TBC1D10CQ8IV04 446 aa11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 FAM126BQ8IXS8 530 aa11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 MYLIPQ8WY64 445 aa11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 RILPL2Q969X0 211 aa11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.6□□□□□ -0.553e-6■□□□□ 10.1
NUDCD3-205ENST00000472246 PPP1R12CQ9BZL4 782 aa11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 SPTBN5Q9NRC6 3674 aaKnown RBP11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 ZMYM6O95789 1325 aa11.6□□□□□ -0.55
NUDCD3-205ENST00000472246 LAMA4Q16363 1823 aa11.59□□□□□ -0.55
NUDCD3-205ENST00000472246 PDHBP11177 359 aa11.59□□□□□ -0.55
NUDCD3-205ENST00000472246 CSF2RAP15509 400 aa11.59□□□□□ -0.55
NUDCD3-205ENST00000472246 NKX3-2P78367 333 aa11.59□□□□□ -0.55
NUDCD3-205ENST00000472246 BAATQ14032 418 aaPredicted RBP11.59□□□□□ -0.55
NUDCD3-205ENST00000472246 FSCN1Q16658 493 aaKnown RBP11.59□□□□□ -0.55
NUDCD3-205ENST00000472246 TAPT1Q6NXT6 567 aa11.59□□□□□ -0.55
NUDCD3-205ENST00000472246 BTNL9Q6UXG8 535 aa11.59□□□□□ -0.55
NUDCD3-205ENST00000472246 YTHDC1Q96MU7 727 aaKnown RBP11.59□□□□□ -0.55
NUDCD3-205ENST00000472246 NEDD4P46934 1319 aa11.59□□□□□ -0.55
NUDCD3-205ENST00000472246 PRUNE2Q8WUY3 3088 aa11.58□□□□□ -0.56
NUDCD3-205ENST00000472246 TLR3O15455 904 aaKnown RBP11.58□□□□□ -0.56
NUDCD3-205ENST00000472246 DYNC1LI2O43237 492 aaPredicted RBP11.58□□□□□ -0.56
NUDCD3-205ENST00000472246 CD4P01730 458 aa11.58□□□□□ -0.56
NUDCD3-205ENST00000472246 ACRP10323 421 aa11.58□□□□□ -0.56
NUDCD3-205ENST00000472246 ALDH5A1P51649 535 aaPredicted RBP11.58□□□□□ -0.56
NUDCD3-205ENST00000472246 AKNAD1Q5T1N1 836 aa11.58□□□□□ -0.56
NUDCD3-205ENST00000472246 SLC30A10Q6XR72 485 aa11.58□□□□□ -0.56
NUDCD3-205ENST00000472246 C16orf59Q7L2K0 433 aa11.58□□□□□ -0.56
NUDCD3-205ENST00000472246 SMC5Q8IY18 1101 aa11.58□□□□□ -0.56
NUDCD3-205ENST00000472246 SLC43A3Q8NBI5 491 aa11.58□□□□□ -0.56
NUDCD3-205ENST00000472246 ZKSCAN3Q9BRR0 538 aa11.58□□□□□ -0.56
NUDCD3-205ENST00000472246 AP5M1Q9H0R1 490 aa11.58□□□□□ -0.56
NUDCD3-205ENST00000472246 VTA1Q9NP79 307 aa11.58□□□□□ -0.56
NUDCD3-205ENST00000472246 TCP11L1Q9NUJ3 509 aa11.58□□□□□ -0.56
NUDCD3-205ENST00000472246 GRIN2DO15399 1336 aa11.58□□□□□ -0.56
NUDCD3-205ENST00000472246 UMODL1Q5DID0 1318 aa11.58□□□□□ -0.56
NUDCD3-205ENST00000472246 PTPDC1A2A3K4 754 aa11.57□□□□□ -0.56
NUDCD3-205ENST00000472246 IGHDP01880 384 aa11.57□□□□□ -0.56
NUDCD3-205ENST00000472246 FOSL2P15408 326 aa11.57□□□□□ -0.56
NUDCD3-205ENST00000472246 DNAJB2P25686 324 aa11.57□□□□□ -0.56
NUDCD3-205ENST00000472246 CYP2C18P33260 490 aa11.57□□□□□ -0.56
NUDCD3-205ENST00000472246 PSMC6P62333 389 aa11.57□□□□□ -0.56
NUDCD3-205ENST00000472246 ZNF543Q08ER8 600 aa11.57□□□□□ -0.56
NUDCD3-205ENST00000472246 PPIGQ13427 754 aaKnown RBP eCLIP11.57□□□□□ -0.564e-6■■■□□ 16
NUDCD3-205ENST00000472246 TMEM240Q5SV17 173 aa11.57□□□□□ -0.56
NUDCD3-205ENST00000472246 MFSD6Q6ZSS7 791 aa11.57□□□□□ -0.56
NUDCD3-205ENST00000472246 KIAA1211Q6ZU35 1233 aa11.57□□□□□ -0.56
NUDCD3-205ENST00000472246 MAFAQ8NHW3 353 aaPredicted RBP11.57□□□□□ -0.56
NUDCD3-205ENST00000472246 MORC4Q8TE76 937 aa11.57□□□□□ -0.56
NUDCD3-205ENST00000472246 CLEC4DQ8WXI8 215 aa11.57□□□□□ -0.56
NUDCD3-205ENST00000472246 COL25A1Q9BXS0 654 aaPredicted RBP11.57□□□□□ -0.56
NUDCD3-205ENST00000472246 CPVLQ9H3G5 476 aa11.57□□□□□ -0.56
NUDCD3-205ENST00000472246 TMEM265A0A087WTH1 108 aa11.56□□□□□ -0.56
NUDCD3-205ENST00000472246 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.56□□□□□ -0.56
NUDCD3-205ENST00000472246 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.56□□□□□ -0.56
NUDCD3-205ENST00000472246 GRXCR1A8MXD5 290 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms