RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 PARP14Q460N5 1801 aa14.27□□□□□ -0.12
PRKCB-205ENST00000472066 ABCB11O95342 1321 aa14.27□□□□□ -0.12
PRKCB-205ENST00000472066 CNTNAP5Q8WYK1 1306 aa14.27□□□□□ -0.12
PRKCB-205ENST00000472066 hCG_1642624A0A1W2PR95 340 aa14.27□□□□□ -0.13
PRKCB-205ENST00000472066 ST18O60284 1047 aa14.27□□□□□ -0.13
PRKCB-205ENST00000472066 ADORA2AP29274 412 aa14.27□□□□□ -0.13
PRKCB-205ENST00000472066 SCRN1Q12765 414 aa14.27□□□□□ -0.13
PRKCB-205ENST00000472066 TRAF1Q13077 416 aa14.27□□□□□ -0.13
PRKCB-205ENST00000472066 MAP2K5Q13163 448 aa14.27□□□□□ -0.13
PRKCB-205ENST00000472066 KCTD2Q14681 263 aa14.27□□□□□ -0.13
PRKCB-205ENST00000472066 ME3Q16798 604 aa14.27□□□□□ -0.13
PRKCB-205ENST00000472066 SOCS4Q8WXH5 440 aa14.27□□□□□ -0.13
PRKCB-205ENST00000472066 SEC63Q9UGP8 760 aaKnown RBP14.27□□□□□ -0.13
PRKCB-205ENST00000472066 PCDHA1Q9Y5I3 950 aa14.27□□□□□ -0.13
PRKCB-205ENST00000472066 COBLO75128 1261 aa14.26□□□□□ -0.13
PRKCB-205ENST00000472066 LARGE1O95461 756 aa14.26□□□□□ -0.13
PRKCB-205ENST00000472066 IFNAR1P17181 557 aa14.26□□□□□ -0.13
PRKCB-205ENST00000472066 CYP2B6P20813 491 aa14.26□□□□□ -0.13
PRKCB-205ENST00000472066 IRF5Q13568 498 aa14.26□□□□□ -0.13
PRKCB-205ENST00000472066 COL13A1Q5TAT6 717 aaPredicted RBP14.26□□□□□ -0.13
PRKCB-205ENST00000472066 FBXO46Q6PJ61 603 aaPredicted RBP14.26□□□□□ -0.13
PRKCB-205ENST00000472066 ANKRD35Q8N283 1001 aa14.26□□□□□ -0.13
PRKCB-205ENST00000472066 RAET1EQ8TD07 263 aa14.26□□□□□ -0.13
PRKCB-205ENST00000472066 DDX11Q96FC9 970 aa14.26□□□□□ -0.13
PRKCB-205ENST00000472066 MRPL11Q9Y3B7 192 aaKnown RBP14.26□□□□□ -0.13
PRKCB-205ENST00000472066 PTCH2Q9Y6C5 1203 aa14.26□□□□□ -0.13
PRKCB-205ENST00000472066 NFIBO00712 420 aa14.25□□□□□ -0.13
PRKCB-205ENST00000472066 CPLX1O14810 134 aa14.25□□□□□ -0.13
PRKCB-205ENST00000472066 PRPF3O43395 683 aaKnown RBP14.25□□□□□ -0.13
PRKCB-205ENST00000472066 HOXC6P09630 235 aa14.25□□□□□ -0.13
PRKCB-205ENST00000472066 XRCC5P13010 732 aaKnown RBP14.25□□□□□ -0.13
PRKCB-205ENST00000472066 RGS2P41220 211 aa14.25□□□□□ -0.13
PRKCB-205ENST00000472066 DPP9Q86TI2 863 aa14.25□□□□□ -0.13
PRKCB-205ENST00000472066 NECAB1Q8N987 351 aa14.25□□□□□ -0.13
PRKCB-205ENST00000472066 RGS22Q8NE09 1264 aa14.25□□□□□ -0.13
PRKCB-205ENST00000472066 PHKBQ93100 1093 aa14.25□□□□□ -0.13
PRKCB-205ENST00000472066 ZSCAN31Q96LW9 406 aaPredicted RBP14.25□□□□□ -0.13
PRKCB-205ENST00000472066 A1CFQ9NQ94 594 aaKnown RBP14.25□□□□□ -0.13
PRKCB-205ENST00000472066 DNAJC25-GNG10A0A024R161 153 aa14.24□□□□□ -0.13
PRKCB-205ENST00000472066 PGK2P07205 417 aa14.24□□□□□ -0.13
PRKCB-205ENST00000472066 ZNF792Q3KQV3 632 aa14.24□□□□□ -0.13
PRKCB-205ENST00000472066 CPLX2Q6PUV4 134 aaKnown RBP14.24□□□□□ -0.13
PRKCB-205ENST00000472066 NSMFQ6X4W1 530 aa14.24□□□□□ -0.13
PRKCB-205ENST00000472066 MCF2L2Q86YR7 1114 aa14.24□□□□□ -0.13
PRKCB-205ENST00000472066 NPLOC4Q8TAT6 608 aa14.24□□□□□ -0.13
PRKCB-205ENST00000472066 TBC1D5Q92609 795 aa14.24□□□□□ -0.13
PRKCB-205ENST00000472066 GTF3C6Q969F1 213 aa14.24□□□□□ -0.13
PRKCB-205ENST00000472066 SLC26A6Q9BXS9 759 aa14.24□□□□□ -0.13
PRKCB-205ENST00000472066 MCOLN1Q9GZU1 580 aa14.24□□□□□ -0.13
PRKCB-205ENST00000472066 SLC5A4Q9NY91 659 aa14.24□□□□□ -0.13
PRKCB-205ENST00000472066 CYP39A1Q9NYL5 469 aa14.24□□□□□ -0.13
PRKCB-205ENST00000472066 PFASO15067 1338 aa14.23□□□□□ -0.13
PRKCB-205ENST00000472066 ZSWIM8A7E2V4 1837 aa14.23□□□□□ -0.13
PRKCB-205ENST00000472066 OPLAHO14841 1288 aa14.23□□□□□ -0.13
PRKCB-205ENST00000472066 ADCY3O60266 1144 aa14.23□□□□□ -0.13
PRKCB-205ENST00000472066 PPFIA3O75145 1194 aa14.23□□□□□ -0.13
PRKCB-205ENST00000472066 CD2BP2O95400 341 aaKnown RBP14.23□□□□□ -0.13
PRKCB-205ENST00000472066 MCM2P49736 904 aa14.23□□□□□ -0.13
PRKCB-205ENST00000472066 AKAP17AQ02040 695 aaKnown RBP14.23□□□□□ -0.13
PRKCB-205ENST00000472066 SSRP1Q08945 709 aaKnown RBP14.23□□□□□ -0.13
PRKCB-205ENST00000472066 BAATQ14032 418 aaPredicted RBP14.23□□□□□ -0.13
PRKCB-205ENST00000472066 PKN1Q16512 942 aa14.23□□□□□ -0.13
PRKCB-205ENST00000472066 PFKFB3Q16875 520 aaPredicted RBP14.23□□□□□ -0.13
PRKCB-205ENST00000472066 RNF207Q6ZRF8 634 aa14.23□□□□□ -0.13
PRKCB-205ENST00000472066 HEATR3Q7Z4Q2 680 aa14.23□□□□□ -0.13
PRKCB-205ENST00000472066 PXYLP1Q8TE99 480 aa14.23□□□□□ -0.13
PRKCB-205ENST00000472066 APBA2Q99767 749 aa14.23□□□□□ -0.13
PRKCB-205ENST00000472066 RNF26Q9BY78 433 aaPredicted RBP14.23□□□□□ -0.13
PRKCB-205ENST00000472066 MAF1Q9H063 256 aa14.23□□□□□ -0.13
PRKCB-205ENST00000472066 RBM27Q9P2N5 1060 aaKnown RBP14.23□□□□□ -0.13
PRKCB-205ENST00000472066 DIS3Q9Y2L1 958 aaKnown RBP14.23□□□□□ -0.13
PRKCB-205ENST00000472066 COL11A1P12107 1806 aaPredicted RBP14.22□□□□□ -0.13
PRKCB-205ENST00000472066 CASP8AP2Q9UKL3 1982 aa14.22□□□□□ -0.13
PRKCB-205ENST00000472066 PTPDC1A2A3K4 754 aa14.22□□□□□ -0.13
PRKCB-205ENST00000472066 POTEB2H3BUK9 544 aa14.22□□□□□ -0.13
PRKCB-205ENST00000472066 CDKL5O76039 1030 aa14.22□□□□□ -0.13
PRKCB-205ENST00000472066 CTDNEP1O95476 244 aa14.22□□□□□ -0.13
PRKCB-205ENST00000472066 ELNP15502 786 aa14.22□□□□□ -0.13
PRKCB-205ENST00000472066 CALML3P27482 149 aa14.22□□□□□ -0.13
PRKCB-205ENST00000472066 GRK4P32298 578 aa14.22□□□□□ -0.13
PRKCB-205ENST00000472066 RPS6P62753 249 aaKnown RBP14.22□□□□□ -0.13
PRKCB-205ENST00000472066 ST3GAL1Q11201 340 aa14.22□□□□□ -0.13
PRKCB-205ENST00000472066 CCL14Q16627 93 aa14.22□□□□□ -0.13
PRKCB-205ENST00000472066 WWC2Q6AWC2 1192 aa14.22□□□□□ -0.13
PRKCB-205ENST00000472066 TRMT44Q8IYL2 757 aaKnown RBP14.22□□□□□ -0.13
PRKCB-205ENST00000472066 TRIM22Q8IYM9 498 aa14.22□□□□□ -0.13
PRKCB-205ENST00000472066 SLAIN1Q8ND83 568 aa14.22□□□□□ -0.13
PRKCB-205ENST00000472066 GPKOWQ92917 476 aaPredicted RBP eCLIP14.22□□□□□ -0.13
PRKCB-205ENST00000472066 SH2B1Q9NRF2 756 aaPredicted RBP14.22□□□□□ -0.13
PRKCB-205ENST00000472066 BARHL2Q9NY43 387 aa14.22□□□□□ -0.13
PRKCB-205ENST00000472066 SOWAHBA6NEL2 793 aa14.21□□□□□ -0.13
PRKCB-205ENST00000472066 SCG2P13521 617 aa14.21□□□□□ -0.13
PRKCB-205ENST00000472066 HSD17B4P51659 736 aa14.21□□□□□ -0.13
PRKCB-205ENST00000472066 CNTN2Q02246 1040 aa14.21□□□□□ -0.13
PRKCB-205ENST00000472066 GHRHRQ02643 423 aa14.21□□□□□ -0.13
PRKCB-205ENST00000472066 SLC30A10Q6XR72 485 aa14.21□□□□□ -0.13
PRKCB-205ENST00000472066 CCDC83Q8IWF9 413 aa14.21□□□□□ -0.13
PRKCB-205ENST00000472066 SAMD3Q8N6K7 520 aa14.21□□□□□ -0.13
PRKCB-205ENST00000472066 FAM133AQ8N9E0 248 aa14.21□□□□□ -0.13
PRKCB-205ENST00000472066 SH3TC2Q8TF17 1288 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms